RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 IFNL2Q8IZJ0 200 aa14.81□□□□□ -0.04
BEST3-201ENST00000266661 PDCP20941 246 aa14.8□□□□□ -0.04
BEST3-201ENST00000266661 KCNJ4P48050 445 aa14.8□□□□□ -0.04
BEST3-201ENST00000266661 TFCP2Q12800 502 aa14.8□□□□□ -0.04
BEST3-201ENST00000266661 ZNF609O15014 1411 aa14.8□□□□□ -0.04
BEST3-201ENST00000266661 VPS37CA5D8V6 355 aaPredicted RBP14.8□□□□□ -0.04
BEST3-201ENST00000266661 DCAF5Q96JK2 942 aa14.8□□□□□ -0.04
BEST3-201ENST00000266661 ARFGEF2Q9Y6D5 1785 aa14.8□□□□□ -0.04
BEST3-201ENST00000266661 THSD7AQ9UPZ6 1657 aa14.79□□□□□ -0.04
BEST3-201ENST00000266661 PIBF1Q8WXW3 757 aa14.79□□□□□ -0.04
BEST3-201ENST00000266661 TCEANC2Q96MN5 208 aa14.79□□□□□ -0.04
BEST3-201ENST00000266661 HAUS7Q99871 368 aa14.79□□□□□ -0.04
BEST3-201ENST00000266661 ONECUT3O60422 494 aaPredicted RBP14.78□□□□□ -0.04
BEST3-201ENST00000266661 KRT85P78386 507 aa14.78□□□□□ -0.04
BEST3-201ENST00000266661 KIAA2012Q0VF49 1180 aa14.78□□□□□ -0.04
BEST3-201ENST00000266661 KRT32Q14532 448 aa14.78□□□□□ -0.04
BEST3-201ENST00000266661 RBM43Q6ZSC3 357 aaKnown RBP14.78□□□□□ -0.04
BEST3-201ENST00000266661 SHANK3Q9BYB0 1731 aa14.78□□□□□ -0.04
BEST3-201ENST00000266661 LIG1P18858 919 aa14.78□□□□□ -0.04
BEST3-201ENST00000266661 FOXO4P98177 505 aa14.78□□□□□ -0.04
BEST3-201ENST00000266661 FAM173BQ6P4H8 233 aa14.78□□□□□ -0.04
BEST3-201ENST00000266661 SASS6Q6UVJ0 657 aa14.78□□□□□ -0.04
BEST3-201ENST00000266661 JARID2Q92833 1246 aaPredicted RBP14.78□□□□□ -0.04
BEST3-201ENST00000266661 FMNL2Q96PY5 1086 aa14.78□□□□□ -0.04
BEST3-201ENST00000266661 SPTLC3Q9NUV7 552 aa14.78□□□□□ -0.04
BEST3-201ENST00000266661 PARP4Q9UKK3 1724 aaKnown RBP14.77□□□□□ -0.04
BEST3-201ENST00000266661 H7C1W4 665 aa14.77□□□□□ -0.05
BEST3-201ENST00000266661 CHGBP05060 677 aa14.77□□□□□ -0.05
BEST3-201ENST00000266661 PTMAP06454 111 aaKnown RBP14.77□□□□□ -0.05
BEST3-201ENST00000266661 IL2RBP14784 551 aa14.77□□□□□ -0.05
BEST3-201ENST00000266661 BARGINQ6ZT62 677 aa14.77□□□□□ -0.05
BEST3-201ENST00000266661 TICAM2Q86XR7 235 aa14.77□□□□□ -0.05
BEST3-201ENST00000266661 PLBD2Q8NHP8 589 aa14.77□□□□□ -0.05
BEST3-201ENST00000266661 GTF3C6Q969F1 213 aa14.77□□□□□ -0.05
BEST3-201ENST00000266661 DBNDD2Q9BQY9 259 aa14.77□□□□□ -0.05
BEST3-201ENST00000266661 PDCL3Q9H2J4 239 aa14.77□□□□□ -0.05
BEST3-201ENST00000266661 U3KPZ7 1027 aaPredicted RBP14.77□□□□□ -0.05
BEST3-201ENST00000266661 DISP2A7MBM2 1401 aa14.77□□□□□ -0.05
BEST3-201ENST00000266661 LAMB4A4D0S4 1761 aa14.77□□□□□ -0.05
BEST3-201ENST00000266661 UBE3BQ7Z3V4 1068 aa14.76□□□□□ -0.05
BEST3-201ENST00000266661 NEK1Q96PY6 1258 aa14.76□□□□□ -0.05
BEST3-201ENST00000266661 AFDNP55196 1824 aaKnown RBP14.76□□□□□ -0.05
BEST3-201ENST00000266661 CYP21A2P08686 494 aa14.76□□□□□ -0.05
BEST3-201ENST00000266661 PIP4K2AP48426 406 aaPredicted RBP14.76□□□□□ -0.05
BEST3-201ENST00000266661 RESTQ13127 1097 aa14.76□□□□□ -0.05
BEST3-201ENST00000266661 ATG9AQ7Z3C6 839 aa14.76□□□□□ -0.05
BEST3-201ENST00000266661 FERMT3Q86UX7 667 aa14.76□□□□□ -0.05
BEST3-201ENST00000266661 SMARCC2Q8TAQ2 1214 aa14.76□□□□□ -0.05
BEST3-201ENST00000266661 LEO1Q8WVC0 666 aaPredicted RBP14.76□□□□□ -0.05
BEST3-201ENST00000266661 ZNF830Q96NB3 372 aaPredicted RBP14.76□□□□□ -0.05
BEST3-201ENST00000266661 SCAND2PQ9GZW5 306 aaPredicted RBP14.76□□□□□ -0.05
BEST3-201ENST00000266661 THRAP3Q9Y2W1 955 aaKnown RBP14.76□□□□□ -0.05
BEST3-201ENST00000266661 PALLDQ8WX93 1383 aa14.75□□□□□ -0.05
BEST3-201ENST00000266661 A0A087WZG4 1122 aa14.75□□□□□ -0.05
BEST3-201ENST00000266661 UQCRHLA0A096LP55 91 aa14.75□□□□□ -0.05
BEST3-201ENST00000266661 NBPF26B4DH59 902 aa14.75□□□□□ -0.05
BEST3-201ENST00000266661 UQCRHP07919 91 aa14.75□□□□□ -0.05
BEST3-201ENST00000266661 MCMDC2Q4G0Z9 681 aa14.75□□□□□ -0.05
BEST3-201ENST00000266661 NBPF14Q5TI25 921 aa14.75□□□□□ -0.05
BEST3-201ENST00000266661 NBPF10Q6P3W6 841 aaKnown RBP14.75□□□□□ -0.05
BEST3-201ENST00000266661 NBPF15Q8N660 670 aa14.75□□□□□ -0.05
BEST3-201ENST00000266661 KBTBD3Q8NAB2 608 aa14.75□□□□□ -0.05
BEST3-201ENST00000266661 SEC62Q99442 399 aaKnown RBP14.75□□□□□ -0.05
BEST3-201ENST00000266661 GPR108Q9NPR9 543 aa14.75□□□□□ -0.05
BEST3-201ENST00000266661 MRVI1Q9Y6F6 885 aa14.75□□□□□ -0.05
BEST3-201ENST00000266661 SH3TC1Q8TE82 1336 aa14.75□□□□□ -0.05
BEST3-201ENST00000266661 DYNC1I1O14576 645 aa14.74□□□□□ -0.05
BEST3-201ENST00000266661 JAK2O60674 1132 aa14.74□□□□□ -0.05
BEST3-201ENST00000266661 CCDC192P0DO97 292 aa14.74□□□□□ -0.05
BEST3-201ENST00000266661 NOLC1Q14978 699 aaKnown RBP eCLIP14.74□□□□□ -0.05
BEST3-201ENST00000266661 DDB1Q16531 1140 aa14.74□□□□□ -0.05
BEST3-201ENST00000266661 CCDC129Q6ZRS4 1044 aa14.74□□□□□ -0.05
BEST3-201ENST00000266661 STOX1Q6ZVD7 989 aa14.74□□□□□ -0.05
BEST3-201ENST00000266661 PGBD1Q96JS3 809 aa14.74□□□□□ -0.05
BEST3-201ENST00000266661 AGXT2Q9BYV1 514 aa14.74□□□□□ -0.05
BEST3-201ENST00000266661 TTC12Q9H892 705 aaPredicted RBP14.74□□□□□ -0.05
BEST3-201ENST00000266661 NDUFB9Q9Y6M9 179 aa14.74□□□□□ -0.05
BEST3-201ENST00000266661 ATP5J2-PTCD1G3V325 749 aa14.74□□□□□ -0.05
BEST3-201ENST00000266661 PTCD1O75127 700 aaKnown RBP14.74□□□□□ -0.05
BEST3-201ENST00000266661 TTC5Q8N0Z6 440 aa14.74□□□□□ -0.05
BEST3-201ENST00000266661 NUP62CLQ9H1M0 184 aa14.74□□□□□ -0.05
BEST3-201ENST00000266661 TJP1Q07157 1748 aa14.73□□□□□ -0.05
BEST3-201ENST00000266661 ADD1P35611 737 aaKnown RBP14.73□□□□□ -0.05
BEST3-201ENST00000266661 MAP3K11Q16584 847 aa14.73□□□□□ -0.05
BEST3-201ENST00000266661 TPRNQ4KMQ1 711 aa14.73□□□□□ -0.05
BEST3-201ENST00000266661 LMBR1LQ6UX01 489 aa14.73□□□□□ -0.05
BEST3-201ENST00000266661 MARCH10Q8NA82 808 aaPredicted RBP14.73□□□□□ -0.05
BEST3-201ENST00000266661 FAM200AQ8TCP9 573 aa14.73□□□□□ -0.05
BEST3-201ENST00000266661 KCNF1Q9H3M0 494 aa14.73□□□□□ -0.05
BEST3-201ENST00000266661 CLSTN2Q9H4D0 955 aa14.73□□□□□ -0.05
BEST3-201ENST00000266661 NUP188Q5SRE5 1749 aa14.73□□□□□ -0.05
BEST3-201ENST00000266661 EXOC5O00471 708 aa14.72□□□□□ -0.05
BEST3-201ENST00000266661 PFKFB2O60825 505 aa14.72□□□□□ -0.05
BEST3-201ENST00000266661 EXOSC10Q01780 885 aaKnown RBP14.72□□□□□ -0.05
BEST3-201ENST00000266661 TYRO3Q06418 890 aa14.72□□□□□ -0.05
BEST3-201ENST00000266661 Q6ZUG5 572 aa14.72□□□□□ -0.05
BEST3-201ENST00000266661 MPNDQ8N594 471 aa14.72□□□□□ -0.05
BEST3-201ENST00000266661 LLPHQ9BRT6 129 aaKnown RBP14.72□□□□□ -0.05
BEST3-201ENST00000266661 DDX19AQ9NUU7 478 aaKnown RBP14.72□□□□□ -0.05
BEST3-201ENST00000266661 DACT1Q9NYF0 836 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms