RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 SETDB2Q96T68 719 aa13.99□□□□□ -0.17
SCAF11-201ENST00000266589 LSG1Q9H089 658 aaKnown RBP13.99□□□□□ -0.17
SCAF11-201ENST00000266589 RFX7Q2KHR2 1363 aa13.99□□□□□ -0.17
SCAF11-201ENST00000266589 IFIT1P09914 478 aaKnown RBP13.99□□□□□ -0.17
SCAF11-201ENST00000266589 GTF2E1P29083 439 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-201ENST00000266589 RFC4P35249 363 aa13.99□□□□□ -0.17
SCAF11-201ENST00000266589 SLC27A3Q5K4L6 730 aa13.99□□□□□ -0.17
SCAF11-201ENST00000266589 GORABQ5T7V8 394 aa13.99□□□□□ -0.17
SCAF11-201ENST00000266589 DDX46Q7L014 1031 aaKnown RBP13.99□□□□□ -0.17
SCAF11-201ENST00000266589 MPHOSPH8Q99549 860 aa13.99□□□□□ -0.17
SCAF11-201ENST00000266589 SLKQ9H2G2 1235 aaPredicted RBP13.99□□□□□ -0.17
SCAF11-201ENST00000266589 PALD1Q9ULE6 856 aa13.99□□□□□ -0.17
SCAF11-201ENST00000266589 ARAP2Q8WZ64 1704 aa13.98□□□□□ -0.17
SCAF11-201ENST00000266589 HSPA4P34932 840 aa13.98□□□□□ -0.17
SCAF11-201ENST00000266589 CCDC158Q5M9N0 1113 aa13.98□□□□□ -0.17
SCAF11-201ENST00000266589 TTC39AQ5SRH9 613 aa13.98□□□□□ -0.17
SCAF11-201ENST00000266589 SPRYD3Q8NCJ5 442 aa13.98□□□□□ -0.17
SCAF11-201ENST00000266589 NYXQ9GZU5 481 aa13.98□□□□□ -0.17
SCAF11-201ENST00000266589 PAG1Q9NWQ8 432 aa13.98□□□□□ -0.17
SCAF11-201ENST00000266589 MROH5Q6ZUA9 1318 aa13.98□□□□□ -0.17
SCAF11-201ENST00000266589 ABCC12Q96J65 1359 aa13.98□□□□□ -0.17
SCAF11-201ENST00000266589 A0A0D9SFI3 127 aa13.97□□□□□ -0.17
SCAF11-201ENST00000266589 PDE8BO95263 885 aa13.97□□□□□ -0.17
SCAF11-201ENST00000266589 ANAPC15P60006 121 aa13.97□□□□□ -0.17
SCAF11-201ENST00000266589 NBPF5PQ86XG9 351 aaPredicted RBP13.97□□□□□ -0.17
SCAF11-201ENST00000266589 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.97□□□□□ -0.17
SCAF11-201ENST00000266589 K7ELQ4 463 aaPredicted RBP13.97□□□□□ -0.17
SCAF11-201ENST00000266589 GOLIM4O00461 696 aa13.97□□□□□ -0.17
SCAF11-201ENST00000266589 ADRA2BP18089 450 aa13.97□□□□□ -0.17
SCAF11-201ENST00000266589 IGHMBP2P38935 993 aaKnown RBP13.97□□□□□ -0.17
SCAF11-201ENST00000266589 KBTBD3Q8NAB2 608 aa13.97□□□□□ -0.17
SCAF11-201ENST00000266589 COL4A1P02462 1669 aa13.97□□□□□ -0.17
SCAF11-201ENST00000266589 C3orf67Q6ZVT6 689 aa13.96□□□□□ -0.17
SCAF11-201ENST00000266589 SNRKQ9NRH2 765 aa13.96□□□□□ -0.17
SCAF11-201ENST00000266589 MED23Q9ULK4 1368 aa13.96□□□□□ -0.17
SCAF11-201ENST00000266589 TAF1P21675 1872 aa13.96□□□□□ -0.18
SCAF11-201ENST00000266589 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.95□□□□□ -0.18
SCAF11-201ENST00000266589 ST18O60284 1047 aa13.95□□□□□ -0.18
SCAF11-201ENST00000266589 RXRBP28702 533 aa13.95□□□□□ -0.18
SCAF11-201ENST00000266589 PTH1RQ03431 593 aa13.95□□□□□ -0.18
SCAF11-201ENST00000266589 SF3B3Q15393 1217 aaKnown RBP13.95□□□□□ -0.18
SCAF11-201ENST00000266589 PUM3Q15397 648 aaKnown RBP13.95□□□□□ -0.18
SCAF11-201ENST00000266589 SLC10A5Q5PT55 438 aa13.95□□□□□ -0.18
SCAF11-201ENST00000266589 HELBQ8NG08 1087 aaPredicted RBP13.95□□□□□ -0.18
SCAF11-201ENST00000266589 CCDC171Q6TFL3 1326 aa13.95□□□□□ -0.18
SCAF11-201ENST00000266589 A0A1B0GUL6 1792 aa13.95□□□□□ -0.18
SCAF11-201ENST00000266589 IL17RAQ96F46 866 aa13.95□□□□□ -0.18
SCAF11-201ENST00000266589 CDC5LQ99459 802 aaKnown RBP13.95□□□□□ -0.18
SCAF11-201ENST00000266589 ANTXR1Q9H6X2 564 aa13.95□□□□□ -0.18
SCAF11-201ENST00000266589 FKBP4Q02790 459 aaKnown RBP eCLIP13.94□□□□□ -0.18
SCAF11-201ENST00000266589 TXNRD1Q16881 649 aa13.94□□□□□ -0.18
SCAF11-201ENST00000266589 TPTE2Q6XPS3 522 aa13.94□□□□□ -0.18
SCAF11-201ENST00000266589 CARMIL3Q8ND23 1372 aa13.94□□□□□ -0.18
SCAF11-201ENST00000266589 CHGBP05060 677 aa13.94□□□□□ -0.18
SCAF11-201ENST00000266589 FGFR2P21802 821 aa13.94□□□□□ -0.18
SCAF11-201ENST00000266589 SCARF1Q14162 830 aa13.94□□□□□ -0.18
SCAF11-201ENST00000266589 ZNF589Q86UQ0 364 aaPredicted RBP13.94□□□□□ -0.18
SCAF11-201ENST00000266589 LPIN2Q92539 896 aa13.94□□□□□ -0.18
SCAF11-201ENST00000266589 TNRC6CQ9HCJ0 1690 aaKnown RBP13.93□□□□□ -0.18
SCAF11-201ENST00000266589 AKAP11Q9UKA4 1901 aa13.93□□□□□ -0.18
SCAF11-201ENST00000266589 TAF5LO75529 589 aa13.93□□□□□ -0.18
SCAF11-201ENST00000266589 SSFA2P28290 1259 aa13.93□□□□□ -0.18
SCAF11-201ENST00000266589 NEK4P51957 841 aa13.93□□□□□ -0.18
SCAF11-201ENST00000266589 NBR1Q14596 966 aa13.93□□□□□ -0.18
SCAF11-201ENST00000266589 ANKRD18AQ8IVF6 992 aa13.93□□□□□ -0.18
SCAF11-201ENST00000266589 NLRP3Q96P20 1036 aa13.93□□□□□ -0.18
SCAF11-201ENST00000266589 NPHP1O15259 732 aa13.92□□□□□ -0.18
SCAF11-201ENST00000266589 SLC5A1P13866 664 aa13.92□□□□□ -0.18
SCAF11-201ENST00000266589 NFIXQ14938 502 aa13.92□□□□□ -0.18
SCAF11-201ENST00000266589 PROM2Q8N271 834 aa13.92□□□□□ -0.18
SCAF11-201ENST00000266589 CCDC24Q8N4L8 307 aa13.92□□□□□ -0.18
SCAF11-201ENST00000266589 SNX14Q9Y5W7 946 aa13.92□□□□□ -0.18
SCAF11-201ENST00000266589 MYH7P12883 1935 aa13.92□□□□□ -0.18
SCAF11-201ENST00000266589 HSP90AA1P07900 732 aaKnown RBP13.92□□□□□ -0.18
SCAF11-201ENST00000266589 MCAMP43121 646 aa13.92□□□□□ -0.18
SCAF11-201ENST00000266589 CHRNDQ07001 517 aa13.92□□□□□ -0.18
SCAF11-201ENST00000266589 PRPF40BQ6NWY9 871 aaKnown RBP13.92□□□□□ -0.18
SCAF11-201ENST00000266589 TICAM2Q86XR7 235 aa13.92□□□□□ -0.18
SCAF11-201ENST00000266589 RASEFQ8IZ41 740 aa13.92□□□□□ -0.18
SCAF11-201ENST00000266589 MAP4K1Q92918 833 aa13.92□□□□□ -0.18
SCAF11-201ENST00000266589 ZNF512BQ96KM6 892 aaPredicted RBP13.92□□□□□ -0.18
SCAF11-201ENST00000266589 SEC62Q99442 399 aaKnown RBP13.92□□□□□ -0.18
SCAF11-201ENST00000266589 RBM8AQ9Y5S9 174 aaKnown RBP13.92□□□□□ -0.18
SCAF11-201ENST00000266589 APBA3O96018 575 aa13.91□□□□□ -0.18
SCAF11-201ENST00000266589 ZAP70P43403 619 aa13.91□□□□□ -0.18
SCAF11-201ENST00000266589 PHKA1P46020 1223 aa13.91□□□□□ -0.18
SCAF11-201ENST00000266589 KCNJ4P48050 445 aa13.91□□□□□ -0.18
SCAF11-201ENST00000266589 MCMDC2Q4G0Z9 681 aa13.91□□□□□ -0.18
SCAF11-201ENST00000266589 CCDC102BQ68D86 513 aa13.91□□□□□ -0.18
SCAF11-201ENST00000266589 PI16Q6UXB8 463 aa13.91□□□□□ -0.18
SCAF11-201ENST00000266589 UPF3BQ9BZI7 483 aaKnown RBP13.91□□□□□ -0.18
SCAF11-201ENST00000266589 TNS1Q9HBL0 1735 aaKnown RBP13.91□□□□□ -0.18
SCAF11-201ENST00000266589 SNAP23O00161 211 aa13.91□□□□□ -0.18
SCAF11-201ENST00000266589 PLSCR1O15162 318 aa13.91□□□□□ -0.18
SCAF11-201ENST00000266589 GYS1P13807 737 aa13.91□□□□□ -0.18
SCAF11-201ENST00000266589 HMGB2P26583 209 aaKnown RBP13.91□□□□□ -0.18
SCAF11-201ENST00000266589 NECTIN1Q15223 517 aa13.91□□□□□ -0.18
SCAF11-201ENST00000266589 CCDC129Q6ZRS4 1044 aa13.91□□□□□ -0.18
SCAF11-201ENST00000266589 RNF113AO15541 343 aaKnown RBP13.9□□□□□ -0.18
SCAF11-201ENST00000266589 ARID4AP29374 1257 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 152.2 ms