RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 USP26Q9BXU7 913 aa29.72■■■□□ 2.35
R3HCC1-201ENST00000265806 TFCP2L1Q9NZI6 479 aa29.72■■■□□ 2.35
R3HCC1-201ENST00000265806 ATP2B3Q16720 1220 aa29.72■■■□□ 2.35
R3HCC1-201ENST00000265806 HAUS7Q99871 368 aa29.72■■■□□ 2.35
R3HCC1-201ENST00000265806 TM4SF1P30408 202 aa29.71■■■□□ 2.35
R3HCC1-201ENST00000265806 PPIL4Q8WUA2 492 aaKnown RBP eCLIP29.71■■■□□ 2.35
R3HCC1-201ENST00000265806 FLAD1Q8NFF5 587 aa29.7■■■□□ 2.35
R3HCC1-201ENST00000265806 XAGE2Q96GT9 111 aa29.7■■■□□ 2.35
R3HCC1-201ENST00000265806 HIP1O00291 1037 aa29.68■■■□□ 2.34
R3HCC1-201ENST00000265806 CNBD1Q8NA66 436 aa29.68■■■□□ 2.34
R3HCC1-201ENST00000265806 EPB41L2O43491 1005 aaKnown RBP29.67■■■□□ 2.34
R3HCC1-201ENST00000265806 CCDC158Q5M9N0 1113 aa29.67■■■□□ 2.34
R3HCC1-201ENST00000265806 ANKRD18AQ8IVF6 992 aa29.67■■■□□ 2.34
R3HCC1-201ENST00000265806 SGSM2O43147 1006 aa29.67■■■□□ 2.34
R3HCC1-201ENST00000265806 FGFR2P21802 821 aa29.67■■■□□ 2.34
R3HCC1-201ENST00000265806 ADORA1P30542 326 aa29.67■■■□□ 2.34
R3HCC1-201ENST00000265806 PUM3Q15397 648 aaKnown RBP29.67■■■□□ 2.34
R3HCC1-201ENST00000265806 DIAPH3Q9NSV4 1193 aa29.67■■■□□ 2.34
R3HCC1-201ENST00000265806 RFX7Q2KHR2 1363 aa29.66■■■□□ 2.34
R3HCC1-201ENST00000265806 NPHP1O15259 732 aa29.66■■■□□ 2.34
R3HCC1-201ENST00000265806 RUFY2Q8WXA3 655 aa29.66■■■□□ 2.34
R3HCC1-201ENST00000265806 SPEF2Q9C093 1822 aa29.66■■■□□ 2.34
R3HCC1-201ENST00000265806 GORABQ5T7V8 394 aa29.65■■■□□ 2.34
R3HCC1-201ENST00000265806 COL23A1Q86Y22 540 aaPredicted RBP29.65■■■□□ 2.34
R3HCC1-201ENST00000265806 LPIN2Q92539 896 aa29.65■■■□□ 2.34
R3HCC1-201ENST00000265806 CAMKK2Q96RR4 588 aa29.65■■■□□ 2.34
R3HCC1-201ENST00000265806 BSDC1Q9NW68 430 aaPredicted RBP29.65■■■□□ 2.34
R3HCC1-201ENST00000265806 COL4A1P02462 1669 aa29.65■■■□□ 2.34
R3HCC1-201ENST00000265806 PRR5LQ6MZQ0 368 aa29.64■■■□□ 2.34
R3HCC1-201ENST00000265806 TICAM2Q86XR7 235 aa29.64■■■□□ 2.34
R3HCC1-201ENST00000265806 FSD1Q9BTV5 496 aa29.64■■■□□ 2.34
R3HCC1-201ENST00000265806 MSH5O43196 834 aa29.64■■■□□ 2.34
R3HCC1-201ENST00000265806 SERPINB2P05120 415 aa29.64■■■□□ 2.34
R3HCC1-201ENST00000265806 IFIT1P09914 478 aaKnown RBP29.64■■■□□ 2.34
R3HCC1-201ENST00000265806 IL25Q9H293 177 aa29.64■■■□□ 2.34
R3HCC1-201ENST00000265806 CCDC24Q8N4L8 307 aa29.63■■■□□ 2.33
R3HCC1-201ENST00000265806 ZNF512BQ96KM6 892 aaPredicted RBP29.63■■■□□ 2.33
R3HCC1-201ENST00000265806 DNAJC2Q99543 621 aaKnown RBP29.63■■■□□ 2.33
R3HCC1-201ENST00000265806 KIF2CQ99661 725 aa29.63■■■□□ 2.33
R3HCC1-201ENST00000265806 TNRC6CQ9HCJ0 1690 aaKnown RBP29.63■■■□□ 2.33
R3HCC1-201ENST00000265806 ARAP2Q8WZ64 1704 aa29.63■■■□□ 2.33
R3HCC1-201ENST00000265806 TTC39AQ5SRH9 613 aa29.62■■■□□ 2.33
R3HCC1-201ENST00000265806 CWC27Q6UX04 472 aaKnown RBP29.62■■■□□ 2.33
R3HCC1-201ENST00000265806 HELBQ8NG08 1087 aaPredicted RBP29.62■■■□□ 2.33
R3HCC1-201ENST00000265806 EDC3Q96F86 508 aaKnown RBP29.62■■■□□ 2.33
R3HCC1-201ENST00000265806 CHRNDQ07001 517 aa29.62■■■□□ 2.33
R3HCC1-201ENST00000265806 NLGN1Q8N2Q7 840 aa29.62■■■□□ 2.33
R3HCC1-201ENST00000265806 POLRMTO00411 1230 aaKnown RBP29.61■■■□□ 2.33
R3HCC1-201ENST00000265806 DDR1Q08345 913 aa29.61■■■□□ 2.33
R3HCC1-201ENST00000265806 CELF1Q92879 486 aaKnown RBP29.61■■■□□ 2.33
R3HCC1-201ENST00000265806 ANO2Q9NQ90 1003 aa29.61■■■□□ 2.33
R3HCC1-201ENST00000265806 PAG1Q9NWQ8 432 aa29.61■■■□□ 2.33
R3HCC1-201ENST00000265806 SLC5A1P13866 664 aa29.6■■■□□ 2.33
R3HCC1-201ENST00000265806 RPS8P62241 208 aaKnown RBP29.6■■■□□ 2.33
R3HCC1-201ENST00000265806 ST5P78524 1137 aa29.6■■■□□ 2.33
R3HCC1-201ENST00000265806 EN1Q05925 392 aaPredicted RBP29.6■■■□□ 2.33
R3HCC1-201ENST00000265806 EZH2Q15910 746 aaKnown RBP29.6■■■□□ 2.33
R3HCC1-201ENST00000265806 KBTBD3Q8NAB2 608 aa29.6■■■□□ 2.33
R3HCC1-201ENST00000265806 NDUFB9Q9Y6M9 179 aa29.6■■■□□ 2.33
R3HCC1-201ENST00000265806 TAF1P21675 1872 aa29.6■■■□□ 2.33
R3HCC1-201ENST00000265806 PNPLA7Q6ZV29 1317 aa29.6■■■□□ 2.33
R3HCC1-201ENST00000265806 RAD50Q92878 1312 aa29.6■■■□□ 2.33
R3HCC1-201ENST00000265806 DDX46Q7L014 1031 aaKnown RBP29.59■■■□□ 2.33
R3HCC1-201ENST00000265806 SNRKQ9NRH2 765 aa29.59■■■□□ 2.33
R3HCC1-201ENST00000265806 TAF5LO75529 589 aa29.58■■■□□ 2.33
R3HCC1-201ENST00000265806 BECN1Q14457 450 aa29.57■■■□□ 2.32
R3HCC1-201ENST00000265806 MINPP1Q9UNW1 487 aa29.57■■■□□ 2.32
R3HCC1-201ENST00000265806 GOLIM4O00461 696 aa29.57■■■□□ 2.32
R3HCC1-201ENST00000265806 NMIQ13287 307 aaPredicted RBP29.57■■■□□ 2.32
R3HCC1-201ENST00000265806 A0A1B0GUL6 1792 aa29.57■■■□□ 2.32
R3HCC1-201ENST00000265806 CRY2Q49AN0 593 aa29.56■■■□□ 2.32
R3HCC1-201ENST00000265806 UQCRFS1P1P0C7P4 283 aa29.55■■■□□ 2.32
R3HCC1-201ENST00000265806 ARID4AP29374 1257 aaPredicted RBP29.55■■■□□ 2.32
R3HCC1-201ENST00000265806 CCDC102BQ68D86 513 aa29.55■■■□□ 2.32
R3HCC1-201ENST00000265806 FAM227BQ96M60 508 aa29.55■■■□□ 2.32
R3HCC1-201ENST00000265806 LSG1Q9H089 658 aaKnown RBP29.55■■■□□ 2.32
R3HCC1-201ENST00000265806 SF3B2Q13435 895 aaKnown RBP29.54■■■□□ 2.32
R3HCC1-201ENST00000265806 SCARF1Q14162 830 aa29.54■■■□□ 2.32
R3HCC1-201ENST00000265806 SLC15A2Q16348 729 aa29.54■■■□□ 2.32
R3HCC1-201ENST00000265806 KIAA1211Q6ZU35 1233 aa29.54■■■□□ 2.32
R3HCC1-201ENST00000265806 MCCP23508 829 aa29.54■■■□□ 2.32
R3HCC1-201ENST00000265806 BAG6P46379 1132 aa29.54■■■□□ 2.32
R3HCC1-201ENST00000265806 UBE4AQ14139 1066 aa29.54■■■□□ 2.32
R3HCC1-201ENST00000265806 ANO8Q9HCE9 1232 aaPredicted RBP29.54■■■□□ 2.32
R3HCC1-201ENST00000265806 DAXXQ9UER7 740 aaPredicted RBP29.54■■■□□ 2.32
R3HCC1-201ENST00000265806 AKAP11Q9UKA4 1901 aa29.54■■■□□ 2.32
R3HCC1-201ENST00000265806 NRXN2Q9P2S2 1712 aa29.53■■■□□ 2.32
R3HCC1-201ENST00000265806 PHKA1P46020 1223 aa29.53■■■□□ 2.32
R3HCC1-201ENST00000265806 A0A0D9SFI3 127 aa29.52■■■□□ 2.32
R3HCC1-201ENST00000265806 SNAP23O00161 211 aa29.52■■■□□ 2.32
R3HCC1-201ENST00000265806 MCAMP43121 646 aa29.52■■■□□ 2.32
R3HCC1-201ENST00000265806 FKBP4Q02790 459 aaKnown RBP eCLIP29.52■■■□□ 2.32
R3HCC1-201ENST00000265806 GRAPQ13588 217 aa29.52■■■□□ 2.32
R3HCC1-201ENST00000265806 GRAPLQ8TC17 118 aaPredicted RBP29.52■■■□□ 2.32
R3HCC1-201ENST00000265806 IL17RAQ96F46 866 aa29.52■■■□□ 2.32
R3HCC1-201ENST00000265806 STK32BQ9NY57 414 aa29.52■■■□□ 2.32
R3HCC1-201ENST00000265806 QSER1Q2KHR3 1735 aa29.51■■■□□ 2.32
R3HCC1-201ENST00000265806 MED23Q9ULK4 1368 aa29.51■■■□□ 2.32
R3HCC1-201ENST00000265806 KLRG2A4D1S0 409 aaPredicted RBP29.51■■■□□ 2.31
R3HCC1-201ENST00000265806 ANAPC15P60006 121 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms