RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 TAF7LQ5H9L4 462 aa20.24■□□□□ 0.83
CHKA-201ENST00000265689 AMIGO3Q86WK7 504 aa20.24■□□□□ 0.83
CHKA-201ENST00000265689 KBTBD3Q8NAB2 608 aa20.24■□□□□ 0.83
CHKA-201ENST00000265689 IL6STP40189 918 aaPredicted RBP20.23■□□□□ 0.83
CHKA-201ENST00000265689 SLFNL1Q499Z3 407 aa20.23■□□□□ 0.83
CHKA-201ENST00000265689 LMBRD1Q9NUN5 540 aa20.23■□□□□ 0.83
CHKA-201ENST00000265689 PAG1Q9NWQ8 432 aa20.23■□□□□ 0.83
CHKA-201ENST00000265689 LINC00116Q8NCU8 138 aa20.23■□□□□ 0.83
CHKA-201ENST00000265689 DDX49Q9Y6V7 483 aaKnown RBP20.23■□□□□ 0.83
CHKA-201ENST00000265689 CDHR2Q9BYE9 1310 aa20.23■□□□□ 0.83
CHKA-201ENST00000265689 RFX7Q2KHR2 1363 aa20.23■□□□□ 0.83
CHKA-201ENST00000265689 TRMT112Q9UI30 125 aaKnown RBP20.22■□□□□ 0.83
CHKA-201ENST00000265689 TRPC5Q9UL62 973 aaPredicted RBP20.22■□□□□ 0.83
CHKA-201ENST00000265689 BTAF1O14981 1849 aa20.22■□□□□ 0.83
CHKA-201ENST00000265689 L1TD1Q5T7N2 865 aaKnown RBP20.22■□□□□ 0.83
CHKA-201ENST00000265689 TTLL11Q8NHH1 800 aa20.22■□□□□ 0.83
CHKA-201ENST00000265689 RPAP1Q9BWH6 1393 aaPredicted RBP20.22■□□□□ 0.83
CHKA-201ENST00000265689 IFIT1P09914 478 aaKnown RBP20.21■□□□□ 0.83
CHKA-201ENST00000265689 ADORA1P30542 326 aa20.21■□□□□ 0.83
CHKA-201ENST00000265689 MCMDC2Q4G0Z9 681 aa20.21■□□□□ 0.83
CHKA-201ENST00000265689 RNF20Q5VTR2 975 aa20.21■□□□□ 0.83
CHKA-201ENST00000265689 GREM2Q9H772 168 aa20.21■□□□□ 0.83
CHKA-201ENST00000265689 IRS4O14654 1257 aaPredicted RBP20.21■□□□□ 0.83
CHKA-201ENST00000265689 BRWD3Q6RI45 1802 aa20.21■□□□□ 0.83
CHKA-201ENST00000265689 ATRNO75882 1429 aa20.2■□□□□ 0.82
CHKA-201ENST00000265689 UBN2Q6ZU65 1347 aa20.2■□□□□ 0.82
CHKA-201ENST00000265689 ERVV-1B6SEH8 477 aa20.2■□□□□ 0.82
CHKA-201ENST00000265689 PRPF40AO75400 957 aaKnown RBP20.2■□□□□ 0.82
CHKA-201ENST00000265689 ITGA6P23229 1130 aa20.2■□□□□ 0.82
CHKA-201ENST00000265689 FBXO3Q9UK99 471 aa20.2■□□□□ 0.82
CHKA-201ENST00000265689 PSMA5P28066 241 aa20.2■□□□□ 0.82
CHKA-201ENST00000265689 CTSWP56202 376 aa20.2■□□□□ 0.82
CHKA-201ENST00000265689 KLHL40Q2TBA0 621 aa20.2■□□□□ 0.82
CHKA-201ENST00000265689 USPL1Q5W0Q7 1092 aa20.2■□□□□ 0.82
CHKA-201ENST00000265689 NUP98P52948 1817 aa20.2■□□□□ 0.82
CHKA-201ENST00000265689 DTNBO60941 627 aa20.19■□□□□ 0.82
CHKA-201ENST00000265689 XAGE2Q96GT9 111 aa20.19■□□□□ 0.82
CHKA-201ENST00000265689 TCEANC2Q96MN5 208 aa20.19■□□□□ 0.82
CHKA-201ENST00000265689 EIF5P55010 431 aaKnown RBP20.19■□□□□ 0.82
CHKA-201ENST00000265689 CCDC83Q8IWF9 413 aa20.19■□□□□ 0.82
CHKA-201ENST00000265689 ANO8Q9HCE9 1232 aaPredicted RBP20.19■□□□□ 0.82
CHKA-201ENST00000265689 CCDC87Q9NVE4 849 aa20.19■□□□□ 0.82
CHKA-201ENST00000265689 AKAP2Q9Y2D5 859 aa20.19■□□□□ 0.82
CHKA-201ENST00000265689 ZNF34Q8IZ26 560 aa20.18■□□□□ 0.82
CHKA-201ENST00000265689 GORABQ5T7V8 394 aa20.18■□□□□ 0.82
CHKA-201ENST00000265689 BLOC1S2Q6QNY1 142 aa20.18■□□□□ 0.82
CHKA-201ENST00000265689 LDHAL6AQ6ZMR3 332 aa20.18■□□□□ 0.82
CHKA-201ENST00000265689 HMG20BQ9P0W2 317 aa20.18■□□□□ 0.82
CHKA-201ENST00000265689 RIPOR2Q9Y4F9 1068 aa20.18■□□□□ 0.82
CHKA-201ENST00000265689 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.18■□□□□ 0.82
CHKA-201ENST00000265689 SH3TC1Q8TE82 1336 aa20.17■□□□□ 0.82
CHKA-201ENST00000265689 ANKRD36CQ5JPF3 1778 aa20.17■□□□□ 0.82
CHKA-201ENST00000265689 XRCC6P12956 609 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHKA-201ENST00000265689 ME3Q16798 604 aa20.17■□□□□ 0.82
CHKA-201ENST00000265689 SBF2Q86WG5 1849 aa20.17■□□□□ 0.82
CHKA-201ENST00000265689 NCLP19338 710 aaKnown RBP20.17■□□□□ 0.82
CHKA-201ENST00000265689 FKBP4Q02790 459 aaKnown RBP eCLIP20.17■□□□□ 0.82
CHKA-201ENST00000265689 TSGA10IPQ3SY00 556 aa20.17■□□□□ 0.82
CHKA-201ENST00000265689 CCDC158Q5M9N0 1113 aa20.17■□□□□ 0.82
CHKA-201ENST00000265689 TTC39AQ5SRH9 613 aa20.17■□□□□ 0.82
CHKA-201ENST00000265689 ZSCAN31Q96LW9 406 aaPredicted RBP20.17■□□□□ 0.82
CHKA-201ENST00000265689 TPCN1Q9ULQ1 816 aa20.17■□□□□ 0.82
CHKA-201ENST00000265689 SMC3Q9UQE7 1217 aa20.17■□□□□ 0.82
CHKA-201ENST00000265689 ANKRD18BA2A2Z9 1011 aa20.16■□□□□ 0.82
CHKA-201ENST00000265689 RPS6KB1P23443 525 aa20.16■□□□□ 0.82
CHKA-201ENST00000265689 ST3GAL1Q11201 340 aa20.16■□□□□ 0.82
CHKA-201ENST00000265689 FOXD4L6Q3SYB3 417 aaPredicted RBP20.16■□□□□ 0.82
CHKA-201ENST00000265689 METTL24Q5JXM2 366 aa20.16■□□□□ 0.82
CHKA-201ENST00000265689 FOXD4L3Q6VB84 417 aaPredicted RBP20.16■□□□□ 0.82
CHKA-201ENST00000265689 GAS2L3Q86XJ1 694 aa20.16■□□□□ 0.82
CHKA-201ENST00000265689 NECAB1Q8N987 351 aa20.16■□□□□ 0.82
CHKA-201ENST00000265689 U3KPZ7 1027 aaPredicted RBP20.16■□□□□ 0.82
CHKA-201ENST00000265689 RIC1Q4ADV7 1423 aa20.16■□□□□ 0.82
CHKA-201ENST00000265689 PDE8AO60658 829 aa20.16■□□□□ 0.82
CHKA-201ENST00000265689 ZMYM1Q5SVZ6 1142 aa20.16■□□□□ 0.82
CHKA-201ENST00000265689 SH2B1Q9NRF2 756 aaPredicted RBP20.16■□□□□ 0.82
CHKA-201ENST00000265689 WDR33Q9C0J8 1336 aaKnown RBP20.16■□□□□ 0.82
CHKA-201ENST00000265689 SCARF1Q14162 830 aa20.15■□□□□ 0.82
CHKA-201ENST00000265689 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.15■□□□□ 0.82
CHKA-201ENST00000265689 HELLSQ9NRZ9 838 aa20.15■□□□□ 0.82
CHKA-201ENST00000265689 TRIM37O94972 964 aa20.15■□□□□ 0.82
CHKA-201ENST00000265689 CNNM1Q9NRU3 951 aa20.15■□□□□ 0.82
CHKA-201ENST00000265689 ATP2B3Q16720 1220 aa20.14■□□□□ 0.82
CHKA-201ENST00000265689 SUSD4Q5VX71 490 aa20.14■□□□□ 0.82
CHKA-201ENST00000265689 GPT2Q8TD30 523 aa20.14■□□□□ 0.82
CHKA-201ENST00000265689 RNF113AO15541 343 aaKnown RBP20.14■□□□□ 0.81
CHKA-201ENST00000265689 CYP21A2P08686 494 aa20.14■□□□□ 0.81
CHKA-201ENST00000265689 SYT1P21579 422 aa20.13■□□□□ 0.81
CHKA-201ENST00000265689 TOB2Q14106 344 aaPredicted RBP20.13■□□□□ 0.81
CHKA-201ENST00000265689 CAVIN1Q6NZI2 390 aaKnown RBP20.13■□□□□ 0.81
CHKA-201ENST00000265689 BICDL1Q6ZP65 573 aa20.13■□□□□ 0.81
CHKA-201ENST00000265689 HCLS1P14317 486 aaPredicted RBP20.13■□□□□ 0.81
CHKA-201ENST00000265689 GJB2P29033 226 aa20.13■□□□□ 0.81
CHKA-201ENST00000265689 PI16Q6UXB8 463 aa20.13■□□□□ 0.81
CHKA-201ENST00000265689 PANK2Q9BZ23 570 aa20.13■□□□□ 0.81
CHKA-201ENST00000265689 COL5A3P25940 1745 aaPredicted RBP20.12■□□□□ 0.81
CHKA-201ENST00000265689 ONECUT3O60422 494 aaPredicted RBP20.12■□□□□ 0.81
CHKA-201ENST00000265689 PHF14O94880 888 aa20.12■□□□□ 0.81
CHKA-201ENST00000265689 CAMTA2O94983 1202 aa20.12■□□□□ 0.81
CHKA-201ENST00000265689 KRT32Q14532 448 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms