RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 RBM27Q9P2N5 1060 aaKnown RBP13.34□□□□□ -0.27
MSH3-201ENST00000265081 EDC3Q96F86 508 aaKnown RBP13.34□□□□□ -0.27
MSH3-201ENST00000265081 JARID2Q92833 1246 aaPredicted RBP13.34□□□□□ -0.27
MSH3-201ENST00000265081 CYP19A1P11511 503 aaPredicted RBP13.33□□□□□ -0.28
MSH3-201ENST00000265081 SMC3Q9UQE7 1217 aa13.33□□□□□ -0.28
MSH3-201ENST00000265081 CHD4Q14839 1912 aa13.33□□□□□ -0.28
MSH3-201ENST00000265081 GADD45BO75293 160 aaPredicted RBP13.33□□□□□ -0.28
MSH3-201ENST00000265081 EVCP57679 992 aa13.33□□□□□ -0.28
MSH3-201ENST00000265081 GIGYF2Q6Y7W6 1299 aaKnown RBP13.33□□□□□ -0.28
MSH3-201ENST00000265081 VGLL2Q8N8G2 317 aa13.33□□□□□ -0.28
MSH3-201ENST00000265081 FUCA2Q9BTY2 467 aa13.33□□□□□ -0.28
MSH3-201ENST00000265081 PAG1Q9NWQ8 432 aa13.33□□□□□ -0.28
MSH3-201ENST00000265081 EXOSC10Q01780 885 aaKnown RBP13.33□□□□□ -0.28
MSH3-201ENST00000265081 LRRC24Q50LG9 513 aa13.33□□□□□ -0.28
MSH3-201ENST00000265081 SALL1Q9NSC2 1324 aa13.33□□□□□ -0.28
MSH3-201ENST00000265081 KIAA1551Q9HCM1 1747 aa13.32□□□□□ -0.28
MSH3-201ENST00000265081 BCL9LQ86UU0 1499 aa13.32□□□□□ -0.28
MSH3-201ENST00000265081 FOXP2O15409 715 aa13.32□□□□□ -0.28
MSH3-201ENST00000265081 UBE2HP62256 183 aa13.32□□□□□ -0.28
MSH3-201ENST00000265081 ATP6V1DQ9Y5K8 247 aa13.32□□□□□ -0.28
MSH3-201ENST00000265081 CYP21A2P08686 494 aa13.32□□□□□ -0.28
MSH3-201ENST00000265081 BLOC1S2Q6QNY1 142 aa13.32□□□□□ -0.28
MSH3-201ENST00000265081 SMARCC2Q8TAQ2 1214 aa13.32□□□□□ -0.28
MSH3-201ENST00000265081 ERVV-1B6SEH8 477 aa13.32□□□□□ -0.28
MSH3-201ENST00000265081 CCDC83Q8IWF9 413 aa13.32□□□□□ -0.28
MSH3-201ENST00000265081 RGS22Q8NE09 1264 aa13.32□□□□□ -0.28
MSH3-201ENST00000265081 GTF3C6Q969F1 213 aa13.32□□□□□ -0.28
MSH3-201ENST00000265081 MYH14Q7Z406 1995 aaKnown RBP13.32□□□□□ -0.28
MSH3-201ENST00000265081 NOL8Q76FK4 1167 aaKnown RBP13.31□□□□□ -0.28
MSH3-201ENST00000265081 AK7Q96M32 723 aa13.31□□□□□ -0.28
MSH3-201ENST00000265081 ASAP1Q9ULH1 1129 aa13.31□□□□□ -0.28
MSH3-201ENST00000265081 STOX1Q6ZVD7 989 aa13.31□□□□□ -0.28
MSH3-201ENST00000265081 RIPOR2Q9Y4F9 1068 aa13.31□□□□□ -0.28
MSH3-201ENST00000265081 HMGB1P09429 215 aaKnown RBP13.3□□□□□ -0.28
MSH3-201ENST00000265081 CNPY2Q9Y2B0 182 aa13.3□□□□□ -0.28
MSH3-201ENST00000265081 RTL9Q8NET4 1388 aa13.3□□□□□ -0.28
MSH3-201ENST00000265081 A0A1B0GUL7 405 aa13.3□□□□□ -0.28
MSH3-201ENST00000265081 SYAP1Q96A49 352 aaPredicted RBP13.3□□□□□ -0.28
MSH3-201ENST00000265081 LLPHQ9BRT6 129 aaKnown RBP13.3□□□□□ -0.28
MSH3-201ENST00000265081 ZBTB3Q9H5J0 574 aa13.3□□□□□ -0.28
MSH3-201ENST00000265081 MAST3O60307 1309 aa13.3□□□□□ -0.28
MSH3-201ENST00000265081 LETM1O95202 739 aaPredicted RBP13.3□□□□□ -0.28
MSH3-201ENST00000265081 NLRP10Q86W26 655 aa13.3□□□□□ -0.28
MSH3-201ENST00000265081 DNAJC10Q8IXB1 793 aa13.3□□□□□ -0.28
MSH3-201ENST00000265081 NEK1Q96PY6 1258 aa13.3□□□□□ -0.28
MSH3-201ENST00000265081 CHGBP05060 677 aa13.29□□□□□ -0.28
MSH3-201ENST00000265081 BTG4Q9NY30 223 aa13.29□□□□□ -0.28
MSH3-201ENST00000265081 THRAP3Q9Y2W1 955 aaKnown RBP13.29□□□□□ -0.28
MSH3-201ENST00000265081 RNF113AO15541 343 aaKnown RBP13.29□□□□□ -0.28
MSH3-201ENST00000265081 CCDC183Q5T5S1 534 aa13.29□□□□□ -0.28
MSH3-201ENST00000265081 DDX54Q8TDD1 881 aaKnown RBP13.29□□□□□ -0.28
MSH3-201ENST00000265081 SEC62Q99442 399 aaKnown RBP13.29□□□□□ -0.28
MSH3-201ENST00000265081 WDR19Q8NEZ3 1342 aa13.29□□□□□ -0.28
MSH3-201ENST00000265081 DLEC1Q9Y238 1755 aa13.29□□□□□ -0.28
MSH3-201ENST00000265081 SYCE3A1L190 88 aa13.29□□□□□ -0.28
MSH3-201ENST00000265081 PFKFB2O60825 505 aa13.29□□□□□ -0.28
MSH3-201ENST00000265081 PUS3Q9BZE2 481 aaKnown RBP13.29□□□□□ -0.28
MSH3-201ENST00000265081 AKAP2Q9Y2D5 859 aa13.29□□□□□ -0.28
MSH3-201ENST00000265081 PHF14O94880 888 aa13.29□□□□□ -0.28
MSH3-201ENST00000265081 STARD3NLO95772 234 aa13.29□□□□□ -0.28
MSH3-201ENST00000265081 HSP90AB3PQ58FF7 597 aa13.29□□□□□ -0.28
MSH3-201ENST00000265081 ZNF34Q8IZ26 560 aa13.29□□□□□ -0.28
MSH3-201ENST00000265081 THSD7AQ9UPZ6 1657 aa13.28□□□□□ -0.28
MSH3-201ENST00000265081 ESPNB1AK53 854 aa13.28□□□□□ -0.28
MSH3-201ENST00000265081 PDCP20941 246 aa13.28□□□□□ -0.28
MSH3-201ENST00000265081 CDCA7Q9BWT1 371 aaPredicted RBP13.28□□□□□ -0.28
MSH3-201ENST00000265081 COL4A1P02462 1669 aa13.28□□□□□ -0.28
MSH3-201ENST00000265081 CSPP1Q1MSJ5 1256 aa13.28□□□□□ -0.28
MSH3-201ENST00000265081 UVSSAQ2YD98 709 aa13.28□□□□□ -0.28
MSH3-201ENST00000265081 KIF6Q6ZMV9 814 aa13.28□□□□□ -0.28
MSH3-201ENST00000265081 RBM43Q6ZSC3 357 aaKnown RBP13.28□□□□□ -0.28
MSH3-201ENST00000265081 ZNF594Q96JF6 807 aaPredicted RBP13.28□□□□□ -0.28
MSH3-201ENST00000265081 HSPD1P10809 573 aaKnown RBP13.28□□□□□ -0.28
MSH3-201ENST00000265081 IL6STP40189 918 aaPredicted RBP13.28□□□□□ -0.28
MSH3-201ENST00000265081 EVA1CP58658 441 aa13.28□□□□□ -0.28
MSH3-201ENST00000265081 CCDC129Q6ZRS4 1044 aa13.28□□□□□ -0.28
MSH3-201ENST00000265081 DDX46Q7L014 1031 aaKnown RBP13.28□□□□□ -0.28
MSH3-201ENST00000265081 RTN4Q9NQC3 1192 aaKnown RBP13.28□□□□□ -0.28
MSH3-201ENST00000265081 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.28□□□□□ -0.28
MSH3-201ENST00000265081 NHSQ6T4R5 1651 aa13.27□□□□□ -0.28
MSH3-201ENST00000265081 TTLL11Q8NHH1 800 aa13.27□□□□□ -0.28
MSH3-201ENST00000265081 STRN4Q9NRL3 753 aa13.27□□□□□ -0.28
MSH3-201ENST00000265081 NDUFB9Q9Y6M9 179 aa13.27□□□□□ -0.28
MSH3-201ENST00000265081 ZMYM6O95789 1325 aa13.27□□□□□ -0.28
MSH3-201ENST00000265081 ZFYP08048 801 aaPredicted RBP13.27□□□□□ -0.29
MSH3-201ENST00000265081 TIMM10P62072 90 aa13.27□□□□□ -0.29
MSH3-201ENST00000265081 LARP6Q9BRS8 491 aaKnown RBP13.27□□□□□ -0.29
MSH3-201ENST00000265081 M0R2C6 588 aa13.27□□□□□ -0.29
MSH3-201ENST00000265081 HLFQ16534 295 aa13.27□□□□□ -0.29
MSH3-201ENST00000265081 FAM184AQ8NB25 1140 aa13.27□□□□□ -0.29
MSH3-201ENST00000265081 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.29
MSH3-201ENST00000265081 CDC37L1Q7L3B6 337 aa13.26□□□□□ -0.29
MSH3-201ENST00000265081 NECAB1Q8N987 351 aa13.26□□□□□ -0.29
MSH3-201ENST00000265081 DNAJC2Q99543 621 aaKnown RBP13.26□□□□□ -0.29
MSH3-201ENST00000265081 TSPY26PQ9H489 355 aa13.26□□□□□ -0.29
MSH3-201ENST00000265081 LY75O60449 1722 aa13.26□□□□□ -0.29
MSH3-201ENST00000265081 ARID4AP29374 1257 aaPredicted RBP13.26□□□□□ -0.29
MSH3-201ENST00000265081 CTSWP56202 376 aa13.26□□□□□ -0.29
MSH3-201ENST00000265081 DHX32Q7L7V1 743 aaKnown RBP13.26□□□□□ -0.29
MSH3-201ENST00000265081 XAGE2Q96GT9 111 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms