RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 HS1BP3Q53T59 392 aa19.86■□□□□ 0.77
NOTCH3-201ENST00000263388 TSGA10Q9BZW7 698 aa19.86■□□□□ 0.77
NOTCH3-201ENST00000263388 KRT83P78385 493 aa19.86■□□□□ 0.77
NOTCH3-201ENST00000263388 MCM6Q14566 821 aa19.86■□□□□ 0.77
NOTCH3-201ENST00000263388 ESR2Q92731 530 aa19.86■□□□□ 0.77
NOTCH3-201ENST00000263388 NOLC1Q14978 699 aaKnown RBP eCLIP19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 LMBR1Q8WVP7 490 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 UQCRFS1P1P0C7P4 283 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 PPM1FP49593 454 aaPredicted RBP19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 SPAG5Q96R06 1193 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 ATP2A1O14983 1001 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 GNAQP50148 359 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 CD109Q6YHK3 1445 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 RAB3IL1Q8TBN0 382 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 WDR66Q8TBY9 1149 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 ZSWIM4Q9H7M6 989 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 TUBBP07437 444 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 NOL3O60936 208 aaKnown RBP19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 SYT1P21579 422 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 HAND2P61296 217 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 FMNL3Q8IVF7 1028 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 TACC1O75410 805 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 CHMP4BP1P59074 171 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 NME9Q86XW9 330 aa19.85■□□□□ 0.77
NOTCH3-201ENST00000263388 TSPY3P0CV98 308 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 TSPY8P0CW00 308 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 SDSP20132 328 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 ALG1Q9BT22 464 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 KIF5AQ12840 1032 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 MRPS27Q92552 414 aaKnown RBP19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 SNX21Q969T3 373 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 CCDC6Q16204 474 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 USHBP1Q8N6Y0 703 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 RTL1A6NKG5 1358 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 LIG1P18858 919 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 MCMDC2Q4G0Z9 681 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 CCDC77Q9BR77 488 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 BICDL2A1A5D9 508 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 CCDC152Q4G0S7 254 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 USP48Q86UV5 1035 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 CNPY2Q9Y2B0 182 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 CLCN1P35523 988 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 MBIPQ9NS73 344 aa19.84■□□□□ 0.77
NOTCH3-201ENST00000263388 PI4KAP2A4QPH2 592 aa19.83■□□□□ 0.77
NOTCH3-201ENST00000263388 PI4KAP1Q8N8J0 262 aa19.83■□□□□ 0.77
NOTCH3-201ENST00000263388 CABP5Q9NP86 173 aa19.83■□□□□ 0.77
NOTCH3-201ENST00000263388 TMEM87AQ8NBN3 555 aa19.83■□□□□ 0.77
NOTCH3-201ENST00000263388 PANK2Q9BZ23 570 aa19.83■□□□□ 0.77
NOTCH3-201ENST00000263388 VAT1LQ9HCJ6 419 aa19.83■□□□□ 0.77
NOTCH3-201ENST00000263388 STX8Q9UNK0 236 aa19.83■□□□□ 0.77
NOTCH3-201ENST00000263388 JAKMIP2Q96AA8 810 aa19.83■□□□□ 0.76
NOTCH3-201ENST00000263388 PUS7Q96PZ0 661 aaKnown RBP19.83■□□□□ 0.76
NOTCH3-201ENST00000263388 CALML3P27482 149 aa19.82■□□□□ 0.76
NOTCH3-201ENST00000263388 KRT13P13646 458 aa19.82■□□□□ 0.76
NOTCH3-201ENST00000263388 UTP14AQ9BVJ6 771 aaKnown RBP19.82■□□□□ 0.76
NOTCH3-201ENST00000263388 CCDC160A6NGH7 325 aa19.82■□□□□ 0.76
NOTCH3-201ENST00000263388 RRAGBQ5VZM2 374 aa19.82■□□□□ 0.76
NOTCH3-201ENST00000263388 ANKRD24Q8TF21 1146 aa19.82■□□□□ 0.76
NOTCH3-201ENST00000263388 AFMP43652 599 aa19.82■□□□□ 0.76
NOTCH3-201ENST00000263388 WDR78Q5VTH9 848 aa19.82■□□□□ 0.76
NOTCH3-201ENST00000263388 PAIP2Q9BPZ3 127 aaKnown RBP19.82■□□□□ 0.76
NOTCH3-201ENST00000263388 KLF18A0A0U1RQI7 1052 aa19.82■□□□□ 0.76
NOTCH3-201ENST00000263388 DNAI1Q9UI46 699 aa19.82■□□□□ 0.76
NOTCH3-201ENST00000263388 SNRPA1P09661 255 aaKnown RBP19.81■□□□□ 0.76
NOTCH3-201ENST00000263388 NOS1P29475 1434 aa19.81■□□□□ 0.76
NOTCH3-201ENST00000263388 CCDC129Q6ZRS4 1044 aa19.8■□□□□ 0.76
NOTCH3-201ENST00000263388 ZHX1Q9UKY1 873 aaPredicted RBP19.8■□□□□ 0.76
NOTCH3-201ENST00000263388 SLU7O95391 586 aaKnown RBP19.8■□□□□ 0.76
NOTCH3-201ENST00000263388 ESYT1Q9BSJ8 1104 aa19.8■□□□□ 0.76
NOTCH3-201ENST00000263388 ANAPC4Q9UJX5 808 aa19.8■□□□□ 0.76
NOTCH3-201ENST00000263388 EMILIN1Q9Y6C2 1016 aa19.8■□□□□ 0.76
NOTCH3-201ENST00000263388 GPTP24298 496 aa19.8■□□□□ 0.76
NOTCH3-201ENST00000263388 TTLL12Q14166 644 aaPredicted RBP19.8■□□□□ 0.76
NOTCH3-201ENST00000263388 TRERF1Q96PN7 1200 aa19.8■□□□□ 0.76
NOTCH3-201ENST00000263388 C6orf229H3BNL8 230 aa19.8■□□□□ 0.76
NOTCH3-201ENST00000263388 MXRA7P84157 204 aa19.8■□□□□ 0.76
NOTCH3-201ENST00000263388 KDM5BQ9UGL1 1544 aa19.8■□□□□ 0.76
NOTCH3-201ENST00000263388 RTL9Q8NET4 1388 aa19.8■□□□□ 0.76
NOTCH3-201ENST00000263388 IFNL2Q8IZJ0 200 aa19.79■□□□□ 0.76
NOTCH3-201ENST00000263388 TSHZ3Q63HK5 1081 aa19.79■□□□□ 0.76
NOTCH3-201ENST00000263388 GNAT2P19087 354 aa19.79■□□□□ 0.76
NOTCH3-201ENST00000263388 TYRO3Q06418 890 aa19.79■□□□□ 0.76
NOTCH3-201ENST00000263388 ANKRD13DQ6ZTN6 518 aa19.79■□□□□ 0.76
NOTCH3-201ENST00000263388 Q6ZUG5 572 aa19.79■□□□□ 0.76
NOTCH3-201ENST00000263388 AOPEPQ8N6M6 819 aa19.79■□□□□ 0.76
NOTCH3-201ENST00000263388 IMPG2Q9BZV3 1241 aa19.79■□□□□ 0.76
NOTCH3-201ENST00000263388 FANCAO15360 1455 aa19.79■□□□□ 0.76
NOTCH3-201ENST00000263388 GRM8O00222 908 aa19.79■□□□□ 0.76
NOTCH3-201ENST00000263388 SMC6Q96SB8 1091 aa19.79■□□□□ 0.76
NOTCH3-201ENST00000263388 CEP83Q9Y592 693 aa19.79■□□□□ 0.76
NOTCH3-201ENST00000263388 ST5P78524 1137 aa19.78■□□□□ 0.76
NOTCH3-201ENST00000263388 ZKSCAN5Q9Y2L8 839 aa19.78■□□□□ 0.76
NOTCH3-201ENST00000263388 IGHDP01880 384 aa19.78■□□□□ 0.76
NOTCH3-201ENST00000263388 RHPN1Q8TCX5 695 aa19.78■□□□□ 0.76
NOTCH3-201ENST00000263388 C11orf95C9JLR9 678 aaPredicted RBP19.78■□□□□ 0.76
NOTCH3-201ENST00000263388 ATL3Q6DD88 541 aa19.78■□□□□ 0.76
NOTCH3-201ENST00000263388 GSTA5Q7RTV2 222 aa19.78■□□□□ 0.76
NOTCH3-201ENST00000263388 DISP3Q9P2K9 1392 aa19.78■□□□□ 0.76
NOTCH3-201ENST00000263388 ZBTB16Q05516 673 aa19.78■□□□□ 0.76
NOTCH3-201ENST00000263388 EBAG9O00559 213 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms