RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 SNRKQ9NRH2 765 aa21.12■□□□□ 0.97
TRAF4-201ENST00000262395 TAOK2Q9UL54 1235 aa21.12■□□□□ 0.97
TRAF4-201ENST00000262395 BECN2A8MW95 431 aa21.12■□□□□ 0.97
TRAF4-201ENST00000262395 NPHP1O15259 732 aa21.12■□□□□ 0.97
TRAF4-201ENST00000262395 DDX21Q9NR30 783 aaKnown RBP eCLIP21.12■□□□□ 0.97
TRAF4-201ENST00000262395 LTN1O94822 1766 aa21.12■□□□□ 0.97
TRAF4-201ENST00000262395 KDM3BQ7LBC6 1761 aa21.12■□□□□ 0.97
TRAF4-201ENST00000262395 NEURL1BA8MQ27 555 aa21.11■□□□□ 0.97
TRAF4-201ENST00000262395 USP28Q96RU2 1077 aa21.11■□□□□ 0.97
TRAF4-201ENST00000262395 ATP5J2-PTCD1G3V325 749 aa21.11■□□□□ 0.97
TRAF4-201ENST00000262395 PTCD1O75127 700 aaKnown RBP21.11■□□□□ 0.97
TRAF4-201ENST00000262395 SKILP12757 684 aa21.11■□□□□ 0.97
TRAF4-201ENST00000262395 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.11■□□□□ 0.97
TRAF4-201ENST00000262395 ZNF609O15014 1411 aa21.1■□□□□ 0.97
TRAF4-201ENST00000262395 NEXNQ0ZGT2 675 aa21.1■□□□□ 0.97
TRAF4-201ENST00000262395 GCKRQ14397 625 aa21.1■□□□□ 0.97
TRAF4-201ENST00000262395 CFAP45Q9UL16 551 aa21.1■□□□□ 0.97
TRAF4-201ENST00000262395 MED1Q15648 1581 aaPredicted RBP21.1■□□□□ 0.97
TRAF4-201ENST00000262395 TNNI3KQ59H18 835 aa21.1■□□□□ 0.97
TRAF4-201ENST00000262395 UBE3BQ7Z3V4 1068 aa21.1■□□□□ 0.97
TRAF4-201ENST00000262395 FPGT-TNNI3KV9GXZ4 949 aa21.1■□□□□ 0.97
TRAF4-201ENST00000262395 ADD1P35611 737 aaKnown RBP21.09■□□□□ 0.97
TRAF4-201ENST00000262395 PDIA4P13667 645 aaKnown RBP21.09■□□□□ 0.97
TRAF4-201ENST00000262395 ME1P48163 572 aa21.09■□□□□ 0.97
TRAF4-201ENST00000262395 KRT32Q14532 448 aa21.09■□□□□ 0.97
TRAF4-201ENST00000262395 USPL1Q5W0Q7 1092 aa21.09■□□□□ 0.97
TRAF4-201ENST00000262395 KLHL34Q8N239 644 aa21.09■□□□□ 0.97
TRAF4-201ENST00000262395 ANKRD24Q8TF21 1146 aa21.09■□□□□ 0.97
TRAF4-201ENST00000262395 ALDH8A1Q9H2A2 487 aaPredicted RBP21.09■□□□□ 0.97
TRAF4-201ENST00000262395 PTPDC1A2A3K4 754 aa21.08■□□□□ 0.97
TRAF4-201ENST00000262395 CTDNEP1O95476 244 aa21.08■□□□□ 0.97
TRAF4-201ENST00000262395 TSGA10IPQ3SY00 556 aa21.08■□□□□ 0.97
TRAF4-201ENST00000262395 AOPEPQ8N6M6 819 aa21.08■□□□□ 0.97
TRAF4-201ENST00000262395 CTNNA3Q9UI47 895 aa21.08■□□□□ 0.97
TRAF4-201ENST00000262395 CCDC69A6NI79 296 aa21.08■□□□□ 0.97
TRAF4-201ENST00000262395 AMOTQ4VCS5 1084 aa21.08■□□□□ 0.97
TRAF4-201ENST00000262395 GTPBP4Q9BZE4 634 aaKnown RBP21.08■□□□□ 0.97
TRAF4-201ENST00000262395 AXIN2Q9Y2T1 843 aa21.08■□□□□ 0.97
TRAF4-201ENST00000262395 UTYO14607 1347 aa21.08■□□□□ 0.96
TRAF4-201ENST00000262395 OTUD7BQ6GQQ9 843 aa21.08■□□□□ 0.96
TRAF4-201ENST00000262395 CCDC73Q6ZRK6 1079 aa21.08■□□□□ 0.96
TRAF4-201ENST00000262395 NSUN7Q8NE18 718 aaKnown RBP21.08■□□□□ 0.96
TRAF4-201ENST00000262395 NEUROD6Q96NK8 337 aa21.08■□□□□ 0.96
TRAF4-201ENST00000262395 ZNF215Q9UL58 517 aaPredicted RBP21.08■□□□□ 0.96
TRAF4-201ENST00000262395 ATP5JP18859 108 aa21.07■□□□□ 0.96
TRAF4-201ENST00000262395 STX1AQ16623 288 aa21.07■□□□□ 0.96
TRAF4-201ENST00000262395 FSIP1Q8NA03 581 aa21.07■□□□□ 0.96
TRAF4-201ENST00000262395 ZSCAN16Q9H4T2 348 aaPredicted RBP21.07■□□□□ 0.96
TRAF4-201ENST00000262395 CHD2O14647 1828 aaKnown RBP21.07■□□□□ 0.96
TRAF4-201ENST00000262395 KINO60870 393 aaKnown RBP21.07■□□□□ 0.96
TRAF4-201ENST00000262395 PTPN12Q05209 780 aaKnown RBP21.07■□□□□ 0.96
TRAF4-201ENST00000262395 MCMDC2Q4G0Z9 681 aa21.07■□□□□ 0.96
TRAF4-201ENST00000262395 PAXBP1Q9Y5B6 917 aa21.07■□□□□ 0.96
TRAF4-201ENST00000262395 GCP02774 474 aa21.06■□□□□ 0.96
TRAF4-201ENST00000262395 SNW1Q13573 536 aaKnown RBP21.06■□□□□ 0.96
TRAF4-201ENST00000262395 PTPN14Q15678 1187 aa21.06■□□□□ 0.96
TRAF4-201ENST00000262395 THEMISQ8N1K5 641 aaPredicted RBP21.06■□□□□ 0.96
TRAF4-201ENST00000262395 U3KPZ7 1027 aaPredicted RBP21.06■□□□□ 0.96
TRAF4-201ENST00000262395 GOLIM4O00461 696 aa21.06■□□□□ 0.96
TRAF4-201ENST00000262395 DHX40Q8IX18 779 aaKnown RBP21.06■□□□□ 0.96
TRAF4-201ENST00000262395 FMNL2Q96PY5 1086 aa21.06■□□□□ 0.96
TRAF4-201ENST00000262395 RAB11FIP4Q86YS3 637 aa21.05■□□□□ 0.96
TRAF4-201ENST00000262395 NFATC2IPQ8NCF5 419 aa21.05■□□□□ 0.96
TRAF4-201ENST00000262395 A0A1B0GVL5 298 aa21.05■□□□□ 0.96
TRAF4-201ENST00000262395 ZNF771Q7L3S4 317 aaPredicted RBP21.05■□□□□ 0.96
TRAF4-201ENST00000262395 GPHNQ9NQX3 736 aaPredicted RBP21.05■□□□□ 0.96
TRAF4-201ENST00000262395 ANKARQ7Z5J8 1434 aa21.05■□□□□ 0.96
TRAF4-201ENST00000262395 ADGRL3Q9HAR2 1447 aa21.05■□□□□ 0.96
TRAF4-201ENST00000262395 OGFRQ9NZT2 677 aa21.05■□□□□ 0.96
TRAF4-201ENST00000262395 ZNF790Q6PG37 636 aa21.04■□□□□ 0.96
TRAF4-201ENST00000262395 RCOR1Q9UKL0 485 aa21.04■□□□□ 0.96
TRAF4-201ENST00000262395 BIN1O00499 593 aa21.04■□□□□ 0.96
TRAF4-201ENST00000262395 JCADQ9P266 1359 aa21.03■□□□□ 0.96
TRAF4-201ENST00000262395 HEG1Q9ULI3 1381 aa21.03■□□□□ 0.96
TRAF4-201ENST00000262395 KCNH5Q8NCM2 988 aa21.03■□□□□ 0.96
TRAF4-201ENST00000262395 SMARCC2Q8TAQ2 1214 aa21.03■□□□□ 0.96
TRAF4-201ENST00000262395 SDF4Q9BRK5 362 aa21.03■□□□□ 0.96
TRAF4-201ENST00000262395 PFKFB2O60825 505 aa21.03■□□□□ 0.96
TRAF4-201ENST00000262395 RFX5P48382 616 aaPredicted RBP21.03■□□□□ 0.96
TRAF4-201ENST00000262395 TIMM10P62072 90 aa21.03■□□□□ 0.96
TRAF4-201ENST00000262395 CCZ1BP86790 482 aa21.03■□□□□ 0.96
TRAF4-201ENST00000262395 CCZ1P86791 482 aaPredicted RBP21.03■□□□□ 0.96
TRAF4-201ENST00000262395 ISM2Q6H9L7 571 aa21.03■□□□□ 0.96
TRAF4-201ENST00000262395 ANKRD13DQ6ZTN6 518 aa21.03■□□□□ 0.96
TRAF4-201ENST00000262395 ORAI2Q96SN7 254 aa21.03■□□□□ 0.96
TRAF4-201ENST00000262395 FEZ1Q99689 392 aa21.03■□□□□ 0.96
TRAF4-201ENST00000262395 METTL22Q9BUU2 404 aaPredicted RBP21.03■□□□□ 0.96
TRAF4-201ENST00000262395 CDC25BP30305 580 aa21.02■□□□□ 0.96
TRAF4-201ENST00000262395 TTLL5Q6EMB2 1281 aa21.02■□□□□ 0.96
TRAF4-201ENST00000262395 DHX32Q7L7V1 743 aaKnown RBP21.02■□□□□ 0.96
TRAF4-201ENST00000262395 MRFAP1L1Q96HT8 127 aa21.02■□□□□ 0.96
TRAF4-201ENST00000262395 CGNQ9P2M7 1197 aaKnown RBP21.02■□□□□ 0.96
TRAF4-201ENST00000262395 POLR3DP05423 398 aaPredicted RBP21.02■□□□□ 0.96
TRAF4-201ENST00000262395 ELF2Q15723 593 aa21.02■□□□□ 0.96
TRAF4-201ENST00000262395 ILDR1Q86SU0 546 aaPredicted RBP21.02■□□□□ 0.96
TRAF4-201ENST00000262395 ZNF496Q96IT1 587 aaPredicted RBP21.02■□□□□ 0.96
TRAF4-201ENST00000262395 GJB4Q9NTQ9 266 aa21.02■□□□□ 0.96
TRAF4-201ENST00000262395 A0A087WZG4 1122 aa21.01■□□□□ 0.95
TRAF4-201ENST00000262395 ZC3H6P61129 1189 aaKnown RBP21.01■□□□□ 0.95
TRAF4-201ENST00000262395 SARM1Q6SZW1 724 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms