RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 DDX11L8A8MPP1 907 aa16.28■□□□□ 0.2
VMP1-201ENST00000262291 TAF5LO75529 589 aa16.28■□□□□ 0.2
VMP1-201ENST00000262291 PDRG1Q9NUG6 133 aa16.28■□□□□ 0.2
VMP1-201ENST00000262291 NUP98P52948 1817 aa16.28■□□□□ 0.2
VMP1-201ENST00000262291 MED23Q9ULK4 1368 aa16.28■□□□□ 0.2
VMP1-201ENST00000262291 CIAO1O76071 339 aa16.28■□□□□ 0.2
VMP1-201ENST00000262291 MCM2P49736 904 aa16.28■□□□□ 0.2
VMP1-201ENST00000262291 VPS53Q5VIR6 699 aa16.28■□□□□ 0.2
VMP1-201ENST00000262291 BCL9LQ86UU0 1499 aa16.28■□□□□ 0.2
VMP1-201ENST00000262291 A0A0G2JLW4 131 aa16.27■□□□□ 0.2
VMP1-201ENST00000262291 CUL4AQ13619 759 aa16.27■□□□□ 0.2
VMP1-201ENST00000262291 TTC39AQ5SRH9 613 aa16.27■□□□□ 0.2
VMP1-201ENST00000262291 BICDL1Q6ZP65 573 aa16.27■□□□□ 0.2
VMP1-201ENST00000262291 ZNF34Q8IZ26 560 aa16.27■□□□□ 0.2
VMP1-201ENST00000262291 CWC22Q9HCG8 908 aaKnown RBP16.27■□□□□ 0.2
VMP1-201ENST00000262291 MYH14Q7Z406 1995 aaKnown RBP16.27■□□□□ 0.2
VMP1-201ENST00000262291 ANKRD18BA2A2Z9 1011 aa16.27■□□□□ 0.19
VMP1-201ENST00000262291 ZKSCAN1P17029 563 aaPredicted RBP16.27■□□□□ 0.19
VMP1-201ENST00000262291 NUCB2P80303 420 aa16.27■□□□□ 0.19
VMP1-201ENST00000262291 NECAB1Q8N987 351 aa16.27■□□□□ 0.19
VMP1-201ENST00000262291 KBTBD3Q8NAB2 608 aa16.27■□□□□ 0.19
VMP1-201ENST00000262291 LINC00116Q8NCU8 138 aa16.27■□□□□ 0.19
VMP1-201ENST00000262291 PLA2G12BQ9BX93 195 aa16.27■□□□□ 0.19
VMP1-201ENST00000262291 SEC31BQ9NQW1 1179 aa16.27■□□□□ 0.19
VMP1-201ENST00000262291 USP21Q9UK80 565 aa16.27■□□□□ 0.19
VMP1-201ENST00000262291 NIP7Q9Y221 180 aaKnown RBP eCLIP16.27■□□□□ 0.19
VMP1-201ENST00000262291 CAMTA2O94983 1202 aa16.26■□□□□ 0.19
VMP1-201ENST00000262291 CYP2E1P05181 493 aaPredicted RBP16.26■□□□□ 0.19
VMP1-201ENST00000262291 ERVV-1B6SEH8 477 aa16.26■□□□□ 0.19
VMP1-201ENST00000262291 TPRNQ4KMQ1 711 aa16.26■□□□□ 0.19
VMP1-201ENST00000262291 CCDC83Q8IWF9 413 aa16.26■□□□□ 0.19
VMP1-201ENST00000262291 IL17RAQ96F46 866 aa16.26■□□□□ 0.19
VMP1-201ENST00000262291 CYP46A1Q9Y6A2 500 aa16.26■□□□□ 0.19
VMP1-201ENST00000262291 ATP2B3Q16720 1220 aa16.25■□□□□ 0.19
VMP1-201ENST00000262291 RIPOR2Q9Y4F9 1068 aa16.25■□□□□ 0.19
VMP1-201ENST00000262291 CDHR2Q9BYE9 1310 aa16.25■□□□□ 0.19
VMP1-201ENST00000262291 EPB41L2O43491 1005 aaKnown RBP16.25■□□□□ 0.19
VMP1-201ENST00000262291 PDE8AO60658 829 aa16.25■□□□□ 0.19
VMP1-201ENST00000262291 ZAP70P43403 619 aa16.25■□□□□ 0.19
VMP1-201ENST00000262291 MCMDC2Q4G0Z9 681 aa16.25■□□□□ 0.19
VMP1-201ENST00000262291 GPR108Q9NPR9 543 aa16.25■□□□□ 0.19
VMP1-201ENST00000262291 VPS72Q15906 364 aa16.25■□□□□ 0.19
VMP1-201ENST00000262291 ZSWIM6Q9HCJ5 1215 aa16.25■□□□□ 0.19
VMP1-201ENST00000262291 LIMCH1Q9UPQ0 1083 aa16.25■□□□□ 0.19
VMP1-201ENST00000262291 RIC1Q4ADV7 1423 aa16.24■□□□□ 0.19
VMP1-201ENST00000262291 NCLP19338 710 aaKnown RBP16.24■□□□□ 0.19
VMP1-201ENST00000262291 CCDC158Q5M9N0 1113 aa16.24■□□□□ 0.19
VMP1-201ENST00000262291 CCDC24Q8N4L8 307 aa16.24■□□□□ 0.19
VMP1-201ENST00000262291 LRRC2Q9BYS8 371 aa16.24■□□□□ 0.19
VMP1-201ENST00000262291 MEX3CQ5U5Q3 659 aaKnown RBP16.24■□□□□ 0.19
VMP1-201ENST00000262291 JCADQ9P266 1359 aa16.24■□□□□ 0.19
VMP1-201ENST00000262291 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
VMP1-201ENST00000262291 M0R2C6 588 aa16.23■□□□□ 0.19
VMP1-201ENST00000262291 STK3Q13188 491 aa16.23■□□□□ 0.19
VMP1-201ENST00000262291 SH3TC1Q8TE82 1336 aa16.23■□□□□ 0.19
VMP1-201ENST00000262291 AKAP2Q9Y2D5 859 aa16.23■□□□□ 0.19
VMP1-201ENST00000262291 PRPF40AO75400 957 aaKnown RBP16.22■□□□□ 0.19
VMP1-201ENST00000262291 WASHC4Q2M389 1173 aa16.22■□□□□ 0.19
VMP1-201ENST00000262291 KCNB2Q92953 911 aa16.22■□□□□ 0.19
VMP1-201ENST00000262291 TPCN1Q9ULQ1 816 aa16.22■□□□□ 0.19
VMP1-201ENST00000262291 ME3Q16798 604 aa16.22■□□□□ 0.19
VMP1-201ENST00000262291 BLOC1S2Q6QNY1 142 aa16.22■□□□□ 0.19
VMP1-201ENST00000262291 NWD2Q9ULI1 1742 aa16.21■□□□□ 0.19
VMP1-201ENST00000262291 FSD2A1L4K1 749 aa16.21■□□□□ 0.19
VMP1-201ENST00000262291 CYP21A2P08686 494 aa16.21■□□□□ 0.19
VMP1-201ENST00000262291 ST3GAL1Q11201 340 aa16.21■□□□□ 0.19
VMP1-201ENST00000262291 OSBP2Q969R2 916 aa16.21■□□□□ 0.19
VMP1-201ENST00000262291 GDPD2Q9HCC8 539 aa16.21■□□□□ 0.19
VMP1-201ENST00000262291 MAST3O60307 1309 aa16.21■□□□□ 0.19
VMP1-201ENST00000262291 MCAMP43121 646 aa16.21■□□□□ 0.19
VMP1-201ENST00000262291 PHKA1P46020 1223 aa16.21■□□□□ 0.19
VMP1-201ENST00000262291 RNF20Q5VTR2 975 aa16.21■□□□□ 0.19
VMP1-201ENST00000262291 TTLL5Q6EMB2 1281 aa16.21■□□□□ 0.19
VMP1-201ENST00000262291 C3orf67Q6ZVT6 689 aa16.21■□□□□ 0.19
VMP1-201ENST00000262291 SMARCC1Q92922 1105 aaPredicted RBP16.21■□□□□ 0.19
VMP1-201ENST00000262291 SRP68Q9UHB9 627 aaKnown RBP16.21■□□□□ 0.19
VMP1-201ENST00000262291 DDX49Q9Y6V7 483 aaKnown RBP16.21■□□□□ 0.19
VMP1-201ENST00000262291 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.18
VMP1-201ENST00000262291 EP400Q96L91 3159 aa16.21■□□□□ 0.18
VMP1-201ENST00000262291 ESPNB1AK53 854 aa16.2■□□□□ 0.18
VMP1-201ENST00000262291 GOLGA6L22H0YM25 854 aa16.2■□□□□ 0.18
VMP1-201ENST00000262291 RNF113AO15541 343 aaKnown RBP16.2■□□□□ 0.18
VMP1-201ENST00000262291 AMIGO3Q86WK7 504 aa16.2■□□□□ 0.18
VMP1-201ENST00000262291 WTIPA6NIX2 430 aaPredicted RBP16.2■□□□□ 0.18
VMP1-201ENST00000262291 HSPA1LP34931 641 aa16.2■□□□□ 0.18
VMP1-201ENST00000262291 ZMYM1Q5SVZ6 1142 aa16.2■□□□□ 0.18
VMP1-201ENST00000262291 INTS4Q96HW7 963 aaKnown RBP16.2■□□□□ 0.18
VMP1-201ENST00000262291 BRD1O95696 1058 aa16.19■□□□□ 0.18
VMP1-201ENST00000262291 STOX1Q6ZVD7 989 aa16.19■□□□□ 0.18
VMP1-201ENST00000262291 FNBP4Q8N3X1 1017 aaPredicted RBP16.19■□□□□ 0.18
VMP1-201ENST00000262291 VGLL2Q8N8G2 317 aa16.19■□□□□ 0.18
VMP1-201ENST00000262291 RPAP1Q9BWH6 1393 aaPredicted RBP16.19■□□□□ 0.18
VMP1-201ENST00000262291 NTSR2O95665 410 aa16.19■□□□□ 0.18
VMP1-201ENST00000262291 ERFEQ4G0M1 354 aa16.19■□□□□ 0.18
VMP1-201ENST00000262291 CHST3Q7LGC8 479 aa16.19■□□□□ 0.18
VMP1-201ENST00000262291 TM6SF1Q9BZW5 370 aa16.19■□□□□ 0.18
VMP1-201ENST00000262291 SMC3Q9UQE7 1217 aa16.19■□□□□ 0.18
VMP1-201ENST00000262291 PDE8BO95263 885 aa16.18■□□□□ 0.18
VMP1-201ENST00000262291 RPS6KB1P23443 525 aa16.18■□□□□ 0.18
VMP1-201ENST00000262291 HAND2P61296 217 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms