RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 KCNQ5Q9NR82 932 aa17.13■□□□□ 0.33
SGCA-201ENST00000262018 FKTNO75072 461 aa17.13■□□□□ 0.33
SGCA-201ENST00000262018 FKBP1BP68106 108 aa17.13■□□□□ 0.33
SGCA-201ENST00000262018 NOM1Q5C9Z4 860 aaKnown RBP17.13■□□□□ 0.33
SGCA-201ENST00000262018 MOB2Q70IA6 237 aa17.13■□□□□ 0.33
SGCA-201ENST00000262018 PLEKHF1Q96S99 279 aa17.13■□□□□ 0.33
SGCA-201ENST00000262018 DUOX1Q9NRD9 1551 aa17.12■□□□□ 0.33
SGCA-201ENST00000262018 GOLGA2Q08379 1002 aa17.12■□□□□ 0.33
SGCA-201ENST00000262018 DOK7Q18PE1 504 aa17.12■□□□□ 0.33
SGCA-201ENST00000262018 ANGEL2Q5VTE6 544 aaKnown RBP17.12■□□□□ 0.33
SGCA-201ENST00000262018 MAPK8IP3Q9UPT6 1336 aa17.12■□□□□ 0.33
SGCA-201ENST00000262018 RTL9Q8NET4 1388 aa17.11■□□□□ 0.33
SGCA-201ENST00000262018 UBE2Q2LH0YL09 131 aa17.11■□□□□ 0.33
SGCA-201ENST00000262018 C6orf229H3BNL8 230 aa17.11■□□□□ 0.33
SGCA-201ENST00000262018 ECE2O60344 883 aa17.11■□□□□ 0.33
SGCA-201ENST00000262018 CCDC27Q2M243 656 aa17.11■□□□□ 0.33
SGCA-201ENST00000262018 NSFL1CQ9UNZ2 370 aaKnown RBP17.11■□□□□ 0.33
SGCA-201ENST00000262018 HTATSF1O43719 755 aaKnown RBP17.1■□□□□ 0.33
SGCA-201ENST00000262018 TM4SF4P48230 202 aa17.1■□□□□ 0.33
SGCA-201ENST00000262018 MKRN3Q13064 507 aaKnown RBP17.1■□□□□ 0.33
SGCA-201ENST00000262018 TMC4Q7Z404 712 aa17.1■□□□□ 0.33
SGCA-201ENST00000262018 PAPPA2Q9BXP8 1791 aa17.1■□□□□ 0.33
SGCA-201ENST00000262018 SLFN5Q08AF3 891 aa17.09■□□□□ 0.33
SGCA-201ENST00000262018 SCARF1Q14162 830 aa17.09■□□□□ 0.33
SGCA-201ENST00000262018 INTS3Q68E01 1043 aaKnown RBP17.09■□□□□ 0.33
SGCA-201ENST00000262018 TRMT2AQ8IZ69 625 aaKnown RBP17.09■□□□□ 0.33
SGCA-201ENST00000262018 R3HDMLQ9H3Y0 253 aa17.09■□□□□ 0.33
SGCA-201ENST00000262018 COLQQ9Y215 455 aaPredicted RBP17.09■□□□□ 0.33
SGCA-201ENST00000262018 WWC1Q8IX03 1113 aa17.08■□□□□ 0.32
SGCA-201ENST00000262018 THUMPD2Q9BTF0 503 aaKnown RBP17.08■□□□□ 0.32
SGCA-201ENST00000262018 LAMB2P55268 1798 aa17.08■□□□□ 0.32
SGCA-201ENST00000262018 EIF4A1P60842 406 aaKnown RBP17.07■□□□□ 0.32
SGCA-201ENST00000262018 TTLL12Q14166 644 aaPredicted RBP17.07■□□□□ 0.32
SGCA-201ENST00000262018 DUSP27Q5VZP5 1158 aa17.07■□□□□ 0.32
SGCA-201ENST00000262018 POLLQ9UGP5 575 aa17.07■□□□□ 0.32
SGCA-201ENST00000262018 SCAF8Q9UPN6 1271 aaKnown RBP17.07■□□□□ 0.32
SGCA-201ENST00000262018 TRIM17Q9Y577 477 aa17.07■□□□□ 0.32
SGCA-201ENST00000262018 TAF1P21675 1872 aa17.07■□□□□ 0.32
SGCA-201ENST00000262018 ANKRD36CQ5JPF3 1778 aa17.06■□□□□ 0.32
SGCA-201ENST00000262018 DLL1O00548 723 aa17.06■□□□□ 0.32
SGCA-201ENST00000262018 VIL1P09327 827 aaKnown RBP17.06■□□□□ 0.32
SGCA-201ENST00000262018 SREBF2Q12772 1141 aa17.06■□□□□ 0.32
SGCA-201ENST00000262018 EYA3Q99504 573 aa17.06■□□□□ 0.32
SGCA-201ENST00000262018 TRMT112Q9UI30 125 aaKnown RBP17.06■□□□□ 0.32
SGCA-201ENST00000262018 E9PSI1 815 aa17.05■□□□□ 0.32
SGCA-201ENST00000262018 EN2P19622 333 aaPredicted RBP17.05■□□□□ 0.32
SGCA-201ENST00000262018 GPSM2P81274 684 aa17.05■□□□□ 0.32
SGCA-201ENST00000262018 NFE2L2Q16236 605 aa17.05■□□□□ 0.32
SGCA-201ENST00000262018 PRAMEF18Q5VWM3 479 aa17.05■□□□□ 0.32
SGCA-201ENST00000262018 NLRP10Q86W26 655 aa17.05■□□□□ 0.32
SGCA-201ENST00000262018 WDR63Q8IWG1 891 aa17.05■□□□□ 0.32
SGCA-201ENST00000262018 G3V3G9 751 aa17.04■□□□□ 0.32
SGCA-201ENST00000262018 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
SGCA-201ENST00000262018 DCAF8Q5TAQ9 597 aa17.04■□□□□ 0.32
SGCA-201ENST00000262018 ERICH6BQ5W0A0 696 aa17.04■□□□□ 0.32
SGCA-201ENST00000262018 CFHR5Q9BXR6 569 aa17.04■□□□□ 0.32
SGCA-201ENST00000262018 RCAN3Q9UKA8 241 aa17.04■□□□□ 0.32
SGCA-201ENST00000262018 ERBB4Q15303 1308 aa17.04■□□□□ 0.32
SGCA-201ENST00000262018 SH3TC1Q8TE82 1336 aa17.04■□□□□ 0.32
SGCA-201ENST00000262018 KIAA0100Q14667 2235 aaKnown RBP17.04■□□□□ 0.32
SGCA-201ENST00000262018 LRRC37AA6NMS7 1700 aa17.04■□□□□ 0.32
SGCA-201ENST00000262018 ZNF280AP59817 542 aaPredicted RBP17.04■□□□□ 0.32
SGCA-201ENST00000262018 OTOP1Q7RTM1 612 aa17.04■□□□□ 0.32
SGCA-201ENST00000262018 CELF1Q92879 486 aaKnown RBP17.04■□□□□ 0.32
SGCA-201ENST00000262018 NEUROD2Q15784 382 aa17.03■□□□□ 0.32
SGCA-201ENST00000262018 HSP90AB3PQ58FF7 597 aa17.03■□□□□ 0.32
SGCA-201ENST00000262018 ZNF428Q96B54 188 aa17.03■□□□□ 0.32
SGCA-201ENST00000262018 ZC3H12CQ9C0D7 883 aaKnown RBP17.03■□□□□ 0.32
SGCA-201ENST00000262018 SPINK5Q9NQ38 1064 aaPredicted RBP17.03■□□□□ 0.32
SGCA-201ENST00000262018 DLG5Q8TDM6 1919 aa17.03■□□□□ 0.32
SGCA-201ENST00000262018 PITPNM2Q9BZ72 1349 aa17.02■□□□□ 0.32
SGCA-201ENST00000262018 KDM3BQ7LBC6 1761 aa17.02■□□□□ 0.31
SGCA-201ENST00000262018 ANXA1P04083 346 aa17.02■□□□□ 0.31
SGCA-201ENST00000262018 RSBN1LQ6PCB5 846 aaPredicted RBP17.02■□□□□ 0.31
SGCA-201ENST00000262018 LRP10Q7Z4F1 713 aa17.02■□□□□ 0.31
SGCA-201ENST00000262018 TBC1D16Q8TBP0 767 aa17.02■□□□□ 0.31
SGCA-201ENST00000262018 MYOZ2Q9NPC6 264 aa17.02■□□□□ 0.31
SGCA-201ENST00000262018 TRIOBPQ9H2D6 2365 aa17.01■□□□□ 0.31
SGCA-201ENST00000262018 DDX60Q8IY21 1712 aaKnown RBP17.01■□□□□ 0.31
SGCA-201ENST00000262018 MKI67P46013 3256 aaKnown RBP17.01■□□□□ 0.31
SGCA-201ENST00000262018 EIF2S2P20042 333 aaKnown RBP17.01■□□□□ 0.31
SGCA-201ENST00000262018 LMOD3Q0VAK6 560 aa17.01■□□□□ 0.31
SGCA-201ENST00000262018 TCIRG1Q13488 830 aa17.01■□□□□ 0.31
SGCA-201ENST00000262018 AGBL3Q8NEM8 1001 aa17.01■□□□□ 0.31
SGCA-201ENST00000262018 SCN9AQ15858 1988 aa17.01■□□□□ 0.31
SGCA-201ENST00000262018 ALDH1A1P00352 501 aa17■□□□□ 0.31
SGCA-201ENST00000262018 NF2P35240 595 aa17■□□□□ 0.31
SGCA-201ENST00000262018 RIPK4P57078 832 aa17■□□□□ 0.31
SGCA-201ENST00000262018 AIMP1Q12904 312 aaKnown RBP17■□□□□ 0.31
SGCA-201ENST00000262018 PDIA6Q15084 440 aa17■□□□□ 0.31
SGCA-201ENST00000262018 PROSER3Q2NL68 480 aa17■□□□□ 0.31
SGCA-201ENST00000262018 SLC17A8Q8NDX2 589 aa17■□□□□ 0.31
SGCA-201ENST00000262018 USP17L8P0C7I0 530 aa16.99■□□□□ 0.31
SGCA-201ENST00000262018 PTPN12Q05209 780 aaKnown RBP16.99■□□□□ 0.31
SGCA-201ENST00000262018 TRIM35Q9UPQ4 493 aa16.99■□□□□ 0.31
SGCA-201ENST00000262018 PTPN22Q9Y2R2 807 aa16.99■□□□□ 0.31
SGCA-201ENST00000262018 PRKG1Q13976 671 aa16.98■□□□□ 0.31
SGCA-201ENST00000262018 COPS6Q7L5N1 327 aa16.98■□□□□ 0.31
SGCA-201ENST00000262018 RBBP6Q7Z6E9 1792 aaKnown RBP16.97■□□□□ 0.31
SGCA-201ENST00000262018 UFL1O94874 794 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms