RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 ZNF496Q96IT1 587 aaPredicted RBP16.4■□□□□ 0.22
TUBGCP3-201ENST00000261965 ALDH1L1O75891 902 aa16.4■□□□□ 0.22
TUBGCP3-201ENST00000261965 KCNF1Q9H3M0 494 aa16.4■□□□□ 0.22
TUBGCP3-201ENST00000261965 MTMR7Q9Y216 660 aa16.4■□□□□ 0.22
TUBGCP3-201ENST00000261965 LMBR1LQ6UX01 489 aa16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 SPATA31D1Q6ZQQ2 1576 aa16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 ITSN1Q15811 1721 aa16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 A0A0G2JLW4 131 aa16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 ZBTB22O15209 634 aa16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 CFAP100Q494V2 611 aa16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 NFXL1Q6ZNB6 911 aa16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 ANKRD13DQ6ZTN6 518 aa16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 ZNF594Q96JF6 807 aaPredicted RBP16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 ZBTB3Q9H5J0 574 aa16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 DBNLQ9UJU6 430 aaKnown RBP16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 MRVI1Q9Y6F6 885 aa16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 REREQ9P2R6 1566 aa16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 CCAR1Q8IX12 1150 aaKnown RBP16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 AOPEPQ8N6M6 819 aa16.39■□□□□ 0.21
TUBGCP3-201ENST00000261965 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 HIP1O00291 1037 aa16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 TPM3P06753 285 aa16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 LMOD1P29536 600 aaPredicted RBP16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 PDE4CQ08493 712 aa16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 RRP12Q5JTH9 1297 aaKnown RBP16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 RNF216Q9NWF9 866 aaPredicted RBP16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 NRKQ7Z2Y5 1582 aa16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 TECPR2O15040 1411 aa16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 CPLX3Q8WVH0 158 aa16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 DDX21Q9NR30 783 aaKnown RBP eCLIP16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 TOB2Q14106 344 aaPredicted RBP16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 KCNH5Q8NCM2 988 aa16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 RASSF8Q8NHQ8 419 aa16.38■□□□□ 0.21
TUBGCP3-201ENST00000261965 AMOTQ4VCS5 1084 aa16.37■□□□□ 0.21
TUBGCP3-201ENST00000261965 TEX35Q5T0J7 233 aa16.37■□□□□ 0.21
TUBGCP3-201ENST00000261965 SCAND2PQ9GZW5 306 aaPredicted RBP16.37■□□□□ 0.21
TUBGCP3-201ENST00000261965 ANKRD1Q15327 319 aa16.37■□□□□ 0.21
TUBGCP3-201ENST00000261965 ZNF790Q6PG37 636 aa16.37■□□□□ 0.21
TUBGCP3-201ENST00000261965 NRXN3Q9Y4C0 1643 aa16.37■□□□□ 0.21
TUBGCP3-201ENST00000261965 ELF2Q15723 593 aa16.37■□□□□ 0.21
TUBGCP3-201ENST00000261965 SMAP1Q8IYB5 467 aaPredicted RBP16.37■□□□□ 0.21
TUBGCP3-201ENST00000261965 CEP57L1Q8IYX8 460 aa16.37■□□□□ 0.21
TUBGCP3-201ENST00000261965 UBXN4Q92575 508 aa16.37■□□□□ 0.21
TUBGCP3-201ENST00000261965 C3P01024 1663 aa16.36■□□□□ 0.21
TUBGCP3-201ENST00000261965 GCKRQ14397 625 aa16.36■□□□□ 0.21
TUBGCP3-201ENST00000261965 KIF18AQ8NI77 898 aa16.36■□□□□ 0.21
TUBGCP3-201ENST00000261965 GPHNQ9NQX3 736 aaPredicted RBP16.36■□□□□ 0.21
TUBGCP3-201ENST00000261965 NEURL1BA8MQ27 555 aa16.36■□□□□ 0.21
TUBGCP3-201ENST00000261965 TAF5LO75529 589 aa16.36■□□□□ 0.21
TUBGCP3-201ENST00000261965 TMEM87AQ8NBN3 555 aa16.36■□□□□ 0.21
TUBGCP3-201ENST00000261965 SFPQP23246 707 aaKnown RBP eCLIP16.36■□□□□ 0.21
TUBGCP3-201ENST00000261965 RALYLQ86SE5 291 aaKnown RBP16.36■□□□□ 0.21
TUBGCP3-201ENST00000261965 MARCKSP29966 332 aaPredicted RBP16.35■□□□□ 0.21
TUBGCP3-201ENST00000261965 PGBD1Q96JS3 809 aa16.35■□□□□ 0.21
TUBGCP3-201ENST00000261965 DNAI1Q9UI46 699 aa16.35■□□□□ 0.21
TUBGCP3-201ENST00000261965 CYP21A2P08686 494 aa16.35■□□□□ 0.21
TUBGCP3-201ENST00000261965 KLHL10Q6JEL2 608 aa16.35■□□□□ 0.21
TUBGCP3-201ENST00000261965 SYT10Q6XYQ8 523 aa16.35■□□□□ 0.21
TUBGCP3-201ENST00000261965 A0A1B0GVL5 298 aa16.35■□□□□ 0.21
TUBGCP3-201ENST00000261965 CCDC69A6NI79 296 aa16.35■□□□□ 0.21
TUBGCP3-201ENST00000261965 TNNI3KQ59H18 835 aa16.35■□□□□ 0.21
TUBGCP3-201ENST00000261965 KRT28Q7Z3Y7 464 aa16.35■□□□□ 0.21
TUBGCP3-201ENST00000261965 PROSER2Q86WR7 435 aaPredicted RBP16.35■□□□□ 0.21
TUBGCP3-201ENST00000261965 FPGT-TNNI3KV9GXZ4 949 aa16.35■□□□□ 0.21
TUBGCP3-201ENST00000261965 ANKLE2Q86XL3 938 aa16.34■□□□□ 0.21
TUBGCP3-201ENST00000261965 TM6SF1Q9BZW5 370 aa16.34■□□□□ 0.21
TUBGCP3-201ENST00000261965 NAT10Q9H0A0 1025 aaKnown RBP16.34■□□□□ 0.21
TUBGCP3-201ENST00000261965 GJB4Q9NTQ9 266 aa16.34■□□□□ 0.21
TUBGCP3-201ENST00000261965 RXRAP19793 462 aa16.34■□□□□ 0.21
TUBGCP3-201ENST00000261965 KIAA1524Q8TCG1 905 aa16.34■□□□□ 0.21
TUBGCP3-201ENST00000261965 TATP17735 454 aaPredicted RBP16.34■□□□□ 0.21
TUBGCP3-201ENST00000261965 CCDC34Q96HJ3 373 aa16.34■□□□□ 0.21
TUBGCP3-201ENST00000261965 TERF1P54274 439 aa16.33■□□□□ 0.21
TUBGCP3-201ENST00000261965 CABP4P57796 275 aa16.33■□□□□ 0.21
TUBGCP3-201ENST00000261965 BABAM1Q9NWV8 329 aa16.33■□□□□ 0.21
TUBGCP3-201ENST00000261965 MON2Q7Z3U7 1717 aa16.33■□□□□ 0.2
TUBGCP3-201ENST00000261965 CFAP45Q9UL16 551 aa16.33■□□□□ 0.2
TUBGCP3-201ENST00000261965 SCRN1Q12765 414 aa16.33■□□□□ 0.2
TUBGCP3-201ENST00000261965 ZNF710Q8N1W2 664 aa16.33■□□□□ 0.2
TUBGCP3-201ENST00000261965 ZNF215Q9UL58 517 aaPredicted RBP16.33■□□□□ 0.2
TUBGCP3-201ENST00000261965 NPHP3Q7Z494 1330 aa16.32■□□□□ 0.2
TUBGCP3-201ENST00000261965 PTPDC1A2A3K4 754 aa16.32■□□□□ 0.2
TUBGCP3-201ENST00000261965 SNW1Q13573 536 aaKnown RBP16.32■□□□□ 0.2
TUBGCP3-201ENST00000261965 FUCA2Q9BTY2 467 aa16.32■□□□□ 0.2
TUBGCP3-201ENST00000261965 ARGLU1Q9NWB6 273 aaPredicted RBP16.32■□□□□ 0.2
TUBGCP3-201ENST00000261965 HOXB7P09629 217 aa16.32■□□□□ 0.2
TUBGCP3-201ENST00000261965 C11orf57Q6ZUT1 292 aaPredicted RBP16.32■□□□□ 0.2
TUBGCP3-201ENST00000261965 DDX19AQ9NUU7 478 aaKnown RBP16.32■□□□□ 0.2
TUBGCP3-201ENST00000261965 CCDC66A2RUB6 948 aa16.31■□□□□ 0.2
TUBGCP3-201ENST00000261965 MCMDC2Q4G0Z9 681 aa16.31■□□□□ 0.2
TUBGCP3-201ENST00000261965 IBSPP21815 317 aaPredicted RBP16.31■□□□□ 0.2
TUBGCP3-201ENST00000261965 USP28Q96RU2 1077 aa16.31■□□□□ 0.2
TUBGCP3-201ENST00000261965 ZNF75DP51815 510 aa16.3■□□□□ 0.2
TUBGCP3-201ENST00000261965 FAM193AP78312 1265 aa16.3■□□□□ 0.2
TUBGCP3-201ENST00000261965 CACTINQ8WUQ7 758 aaKnown RBP16.3■□□□□ 0.2
TUBGCP3-201ENST00000261965 IFIT1P09914 478 aaKnown RBP16.3■□□□□ 0.2
TUBGCP3-201ENST00000261965 TRDNQ13061 729 aa16.3■□□□□ 0.2
TUBGCP3-201ENST00000261965 MTX1Q13505 466 aa16.3■□□□□ 0.2
TUBGCP3-201ENST00000261965 CCDC144BQ3MJ40 725 aa16.3■□□□□ 0.2
TUBGCP3-201ENST00000261965 ARHGEF25Q86VW2 580 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms