RNA–Protein interactions for RNA: ENST00000261597.8

NDC80-201, Transcript of NDC80, kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC80, Length 2,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-201ENST00000261597 TTC41PQ6P2S7 1318 aa8.24□□□□□ -1.09
NDC80-201ENST00000261597 C4AP0C0L4 1744 aa8.24□□□□□ -1.09
NDC80-201ENST00000261597 HCLS1P14317 486 aaPredicted RBP8.24□□□□□ -1.09
NDC80-201ENST00000261597 GSPT1P15170 499 aaKnown RBP8.24□□□□□ -1.09
NDC80-201ENST00000261597 ITGA6P23229 1130 aa8.24□□□□□ -1.09
NDC80-201ENST00000261597 TFCP2Q12800 502 aa8.24□□□□□ -1.09
NDC80-201ENST00000261597 TAF7LQ5H9L4 462 aa8.24□□□□□ -1.09
NDC80-201ENST00000261597 TPTE2Q6XPS3 522 aa8.24□□□□□ -1.09
NDC80-201ENST00000261597 BICDL1Q6ZP65 573 aa8.24□□□□□ -1.09
NDC80-201ENST00000261597 GPATCH3Q96I76 525 aa8.24□□□□□ -1.09
NDC80-201ENST00000261597 GPR108Q9NPR9 543 aa8.24□□□□□ -1.09
NDC80-201ENST00000261597 ARIH1Q9Y4X5 557 aaPredicted RBP8.24□□□□□ -1.09
NDC80-201ENST00000261597 TNS1Q9HBL0 1735 aaKnown RBP8.23□□□□□ -1.09
NDC80-201ENST00000261597 RGPD3A6NKT7 1758 aaPredicted RBP8.23□□□□□ -1.09
NDC80-201ENST00000261597 RGPD4Q7Z3J3 1758 aa8.23□□□□□ -1.09
NDC80-201ENST00000261597 ERC2O15083 957 aa8.23□□□□□ -1.09
NDC80-201ENST00000261597 EIF5BO60841 1220 aaKnown RBP8.23□□□□□ -1.09
NDC80-201ENST00000261597 CCDC152Q4G0S7 254 aa8.23□□□□□ -1.09
NDC80-201ENST00000261597 AACSQ86V21 672 aa8.23□□□□□ -1.09
NDC80-201ENST00000261597 NBPF5PQ86XG9 351 aaPredicted RBP8.23□□□□□ -1.09
NDC80-201ENST00000261597 FBXO22Q8NEZ5 403 aa8.23□□□□□ -1.09
NDC80-201ENST00000261597 FLAD1Q8NFF5 587 aa8.23□□□□□ -1.09
NDC80-201ENST00000261597 AKT1S1Q96B36 256 aa8.23□□□□□ -1.09
NDC80-201ENST00000261597 EAF2Q96CJ1 260 aaPredicted RBP8.23□□□□□ -1.09
NDC80-201ENST00000261597 ZNF594Q96JF6 807 aaPredicted RBP8.23□□□□□ -1.09
NDC80-201ENST00000261597 GREM2Q9H772 168 aa8.23□□□□□ -1.09
NDC80-201ENST00000261597 RTL9Q8NET4 1388 aa8.23□□□□□ -1.09
NDC80-201ENST00000261597 CDC45O75419 566 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 SDSP20132 328 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 GTF2E1P29083 439 aaPredicted RBP8.22□□□□□ -1.09
NDC80-201ENST00000261597 ERFEQ4G0M1 354 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 LRRC24Q50LG9 513 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 TNNI3KQ59H18 835 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 CCDC85AQ96PX6 553 aaPredicted RBP8.22□□□□□ -1.09
NDC80-201ENST00000261597 KDM4CQ9H3R0 1056 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 ECHDC1Q9NTX5 307 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.22□□□□□ -1.09
NDC80-201ENST00000261597 FPGT-TNNI3KV9GXZ4 949 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 LAMB2P55268 1798 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 COL24A1Q17RW2 1714 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 DDX60Q8IY21 1712 aaKnown RBP8.22□□□□□ -1.09
NDC80-201ENST00000261597 GLRX3O76003 335 aaKnown RBP8.22□□□□□ -1.09
NDC80-201ENST00000261597 GYS1P13807 737 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 SF3B3Q15393 1217 aaKnown RBP8.22□□□□□ -1.09
NDC80-201ENST00000261597 PI4K2BQ8TCG2 481 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 CAMKK2Q96RR4 588 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 PUS3Q9BZE2 481 aaKnown RBP8.22□□□□□ -1.09
NDC80-201ENST00000261597 TFCP2L1Q9NZI6 479 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 CEP126Q9P2H0 1117 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 RIPOR2Q9Y4F9 1068 aa8.22□□□□□ -1.09
NDC80-201ENST00000261597 NFIXQ14938 502 aa8.21□□□□□ -1.09
NDC80-201ENST00000261597 ZNF827Q17R98 1081 aa8.21□□□□□ -1.09
NDC80-201ENST00000261597 LDHAL6AQ6ZMR3 332 aa8.21□□□□□ -1.09
NDC80-201ENST00000261597 CCDC8Q9H0W5 538 aaPredicted RBP8.21□□□□□ -1.09
NDC80-201ENST00000261597 CLEC11AQ9Y240 323 aa8.21□□□□□ -1.09
NDC80-201ENST00000261597 AKAP2Q9Y2D5 859 aa8.21□□□□□ -1.09
NDC80-201ENST00000261597 CARMIL3Q8ND23 1372 aa8.21□□□□□ -1.1
NDC80-201ENST00000261597 SEC24BO95487 1268 aa8.21□□□□□ -1.1
NDC80-201ENST00000261597 TM4SF1P30408 202 aa8.21□□□□□ -1.1
NDC80-201ENST00000261597 SF3B2Q13435 895 aaKnown RBP8.21□□□□□ -1.1
NDC80-201ENST00000261597 TSHZ3Q63HK5 1081 aa8.21□□□□□ -1.1
NDC80-201ENST00000261597 CASC1Q6TDU7 716 aa8.21□□□□□ -1.1
NDC80-201ENST00000261597 TBC1D9Q6ZT07 1266 aa8.21□□□□□ -1.1
NDC80-201ENST00000261597 NLRP3Q96P20 1036 aa8.21□□□□□ -1.1
NDC80-201ENST00000261597 UPF2Q9HAU5 1272 aaKnown RBP8.21□□□□□ -1.1
NDC80-201ENST00000261597 CNNM1Q9NRU3 951 aa8.21□□□□□ -1.1
NDC80-201ENST00000261597 PCDHB8Q9UN66 801 aa8.21□□□□□ -1.1
NDC80-201ENST00000261597 PCDHB13Q9Y5F0 798 aa8.21□□□□□ -1.1
NDC80-201ENST00000261597 TRIM6-TRIM34B2RNG4 842 aa8.2□□□□□ -1.1
NDC80-201ENST00000261597 NLGN1Q8N2Q7 840 aa8.2□□□□□ -1.1
NDC80-201ENST00000261597 CDC5LQ99459 802 aaKnown RBP8.2□□□□□ -1.1
NDC80-201ENST00000261597 ATP5JP18859 108 aa8.2□□□□□ -1.1
NDC80-201ENST00000261597 IGHMBP2P38935 993 aaKnown RBP8.2□□□□□ -1.1
NDC80-201ENST00000261597 BAG6P46379 1132 aa8.2□□□□□ -1.1
NDC80-201ENST00000261597 EN1Q05925 392 aaPredicted RBP8.2□□□□□ -1.1
NDC80-201ENST00000261597 EZH2Q15910 746 aaKnown RBP8.2□□□□□ -1.1
NDC80-201ENST00000261597 COL23A1Q86Y22 540 aaPredicted RBP8.2□□□□□ -1.1
NDC80-201ENST00000261597 CNTROBQ8N137 903 aa8.2□□□□□ -1.1
NDC80-201ENST00000261597 NEUROD6Q96NK8 337 aa8.2□□□□□ -1.1
NDC80-201ENST00000261597 MPHOSPH8Q99549 860 aa8.2□□□□□ -1.1
NDC80-201ENST00000261597 SEC31BQ9NQW1 1179 aa8.2□□□□□ -1.1
NDC80-201ENST00000261597 DBNLQ9UJU6 430 aaKnown RBP8.2□□□□□ -1.1
NDC80-201ENST00000261597 TUBGCP6Q96RT7 1819 aa8.19□□□□□ -1.1
NDC80-201ENST00000261597 MROH5Q6ZUA9 1318 aa8.19□□□□□ -1.1
NDC80-201ENST00000261597 NPHP1O15259 732 aa8.19□□□□□ -1.1
NDC80-201ENST00000261597 METTL24Q5JXM2 366 aa8.19□□□□□ -1.1
NDC80-201ENST00000261597 CNBD1Q8NA66 436 aa8.19□□□□□ -1.1
NDC80-201ENST00000261597 RILPL2Q969X0 211 aa8.19□□□□□ -1.1
NDC80-201ENST00000261597 ARID3AQ99856 593 aa8.19□□□□□ -1.1
NDC80-201ENST00000261597 TLR7Q9NYK1 1049 aaKnown RBP8.19□□□□□ -1.1
NDC80-201ENST00000261597 ABCC12Q96J65 1359 aa8.19□□□□□ -1.1
NDC80-201ENST00000261597 EP400Q96L91 3159 aa8.19□□□□□ -1.1
NDC80-201ENST00000261597 A0A1B0GUL7 405 aa8.18□□□□□ -1.1
NDC80-201ENST00000261597 SERPINB2P05120 415 aa8.18□□□□□ -1.1
NDC80-201ENST00000261597 PSEN1P49768 467 aa8.18□□□□□ -1.1
NDC80-201ENST00000261597 TIMM10P62072 90 aa8.18□□□□□ -1.1
NDC80-201ENST00000261597 MKRN3Q13064 507 aaKnown RBP8.18□□□□□ -1.1
NDC80-201ENST00000261597 MFSD10Q14728 455 aa8.18□□□□□ -1.1
NDC80-201ENST00000261597 SLC15A2Q16348 729 aa8.18□□□□□ -1.1
NDC80-201ENST00000261597 C3orf67Q6ZVT6 689 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 758.2 ms