RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 ANKRD13DQ6ZTN6 518 aa11.72□□□□□ -0.53
PALB2-201ENST00000261584 ABCF2Q9UG63 623 aa11.72□□□□□ -0.53
PALB2-201ENST00000261584 GTF2E1P29083 439 aaPredicted RBP11.72□□□□□ -0.53
PALB2-201ENST00000261584 ZCCHC17Q9NP64 241 aaKnown RBP11.72□□□□□ -0.53
PALB2-201ENST00000261584 MAPK8IP1Q9UQF2 711 aa11.71□□□□□ -0.53
PALB2-201ENST00000261584 U3KPZ7 1027 aaPredicted RBP11.71□□□□□ -0.53
PALB2-201ENST00000261584 RGS12O14924 1447 aa11.71□□□□□ -0.53
PALB2-201ENST00000261584 ARHGEF5Q12774 1597 aa11.71□□□□□ -0.53
PALB2-201ENST00000261584 POLR1AO95602 1720 aaPredicted RBP11.71□□□□□ -0.53
PALB2-201ENST00000261584 MATR3P43243 847 aaKnown RBP eCLIP11.71□□□□□ -0.53
PALB2-201ENST00000261584 SYKP43405 635 aa11.71□□□□□ -0.53
PALB2-201ENST00000261584 NOC3LQ8WTT2 800 aaKnown RBP11.71□□□□□ -0.53
PALB2-201ENST00000261584 SLC26A6Q9BXS9 759 aa11.71□□□□□ -0.53
PALB2-201ENST00000261584 TERF1P54274 439 aa11.71□□□□□ -0.54
PALB2-201ENST00000261584 PPFIBP1Q86W92 1011 aa11.71□□□□□ -0.54
PALB2-201ENST00000261584 PGBD1Q96JS3 809 aa11.71□□□□□ -0.54
PALB2-201ENST00000261584 PHF8Q9UPP1 1060 aa11.71□□□□□ -0.54
PALB2-201ENST00000261584 CASQ1P31415 396 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 ADKP55263 362 aaKnown RBP11.7□□□□□ -0.54
PALB2-201ENST00000261584 IMMTQ16891 758 aaKnown RBP11.7□□□□□ -0.54
PALB2-201ENST00000261584 DPCR1Q3MIW9 517 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 AIFM3Q96NN9 605 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 PLEKHA4Q9H4M7 779 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 TPM1P09493 284 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 ZSCAN20P17040 1043 aaPredicted RBP11.7□□□□□ -0.54
PALB2-201ENST00000261584 MCMDC2Q4G0Z9 681 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 LRRC8AQ8IWT6 810 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 ZNF397Q8NF99 534 aaPredicted RBP11.7□□□□□ -0.54
PALB2-201ENST00000261584 GTPBP4Q9BZE4 634 aaKnown RBP11.7□□□□□ -0.54
PALB2-201ENST00000261584 CENPHQ9H3R5 247 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 A0A0G2JLW4 131 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 SPTLC2O15270 562 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 ATP1A3P13637 1013 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
PALB2-201ENST00000261584 DNAJC21Q5F1R6 531 aaKnown RBP11.7□□□□□ -0.54
PALB2-201ENST00000261584 DRC1Q96MC2 740 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 ZSWIM6Q9HCJ5 1215 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 FAM135BQ49AJ0 1406 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 ZMYM3Q14202 1370 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 ZNF213O14771 459 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 EVA1CP58658 441 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 SCRN1Q12765 414 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 BEND3Q5T5X7 828 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 ANKRD24Q8TF21 1146 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 CLIC6Q96NY7 704 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 OSBPL3Q9H4L5 887 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 CDC42BPBQ9Y5S2 1711 aa11.7□□□□□ -0.54
PALB2-201ENST00000261584 KCNA6P17658 529 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 METTL24Q5JXM2 366 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 FBXO38Q6PIJ6 1188 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 TIGD1Q96MW7 591 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 NCOA3Q9Y6Q9 1424 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 MADDQ8WXG6 1647 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 DHX16O60231 1041 aaKnown RBP11.69□□□□□ -0.54
PALB2-201ENST00000261584 NDUFA8P51970 172 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 EVCP57679 992 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 EIF4A1P60842 406 aaKnown RBP11.69□□□□□ -0.54
PALB2-201ENST00000261584 PI16Q6UXB8 463 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 PLIN2Q99541 437 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 ALG1Q9BT22 464 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 TRPM2O94759 1503 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 PRC1O43663 620 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 CYP21A2P08686 494 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 TATP17735 454 aaPredicted RBP11.69□□□□□ -0.54
PALB2-201ENST00000261584 CLIC4Q9Y696 253 aa11.69□□□□□ -0.54
PALB2-201ENST00000261584 SETD1BQ9UPS6 1966 aaKnown RBP11.69□□□□□ -0.54
PALB2-201ENST00000261584 PTCH1Q13635 1447 aa11.68□□□□□ -0.54
PALB2-201ENST00000261584 ERICH2A1L162 156 aa11.68□□□□□ -0.54
PALB2-201ENST00000261584 TDO2P48775 406 aa11.68□□□□□ -0.54
PALB2-201ENST00000261584 PNOCQ13519 176 aa11.68□□□□□ -0.54
PALB2-201ENST00000261584 BMS1Q14692 1282 aaKnown RBP11.68□□□□□ -0.54
PALB2-201ENST00000261584 SAMD1Q6SPF0 538 aaPredicted RBP11.68□□□□□ -0.54
PALB2-201ENST00000261584 CLSTN1O94985 981 aa11.68□□□□□ -0.54
PALB2-201ENST00000261584 LTKP29376 864 aa11.68□□□□□ -0.54
PALB2-201ENST00000261584 LEKR1Q6ZMV7 388 aa11.68□□□□□ -0.54
PALB2-201ENST00000261584 CLEC17AQ6ZS10 378 aa11.68□□□□□ -0.54
PALB2-201ENST00000261584 LINS1Q8NG48 757 aa11.68□□□□□ -0.54
PALB2-201ENST00000261584 RPAP1Q9BWH6 1393 aaPredicted RBP11.68□□□□□ -0.54
PALB2-201ENST00000261584 ZFYVE9O95405 1425 aa11.68□□□□□ -0.54
PALB2-201ENST00000261584 YEATS2Q9ULM3 1422 aa11.68□□□□□ -0.54
PALB2-201ENST00000261584 SF3A3Q12874 501 aaKnown RBP eCLIP11.68□□□□□ -0.54
PALB2-201ENST00000261584 PAG1Q9NWQ8 432 aa11.68□□□□□ -0.54
PALB2-201ENST00000261584 IFIT3O14879 490 aaKnown RBP11.67□□□□□ -0.54
PALB2-201ENST00000261584 SASH1O94885 1247 aa11.67□□□□□ -0.54
PALB2-201ENST00000261584 ADD1P35611 737 aaKnown RBP11.67□□□□□ -0.54
PALB2-201ENST00000261584 MTX1Q13505 466 aa11.67□□□□□ -0.54
PALB2-201ENST00000261584 DHX32Q7L7V1 743 aaKnown RBP11.67□□□□□ -0.54
PALB2-201ENST00000261584 CAPZA3Q96KX2 299 aa11.67□□□□□ -0.54
PALB2-201ENST00000261584 LRRC7Q96NW7 1537 aa11.67□□□□□ -0.54
PALB2-201ENST00000261584 MAP3K5Q99683 1374 aa11.67□□□□□ -0.54
PALB2-201ENST00000261584 VPS37DQ86XT2 251 aa11.67□□□□□ -0.54
PALB2-201ENST00000261584 STAP2Q9UGK3 403 aa11.67□□□□□ -0.54
PALB2-201ENST00000261584 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.67□□□□□ -0.54
PALB2-201ENST00000261584 TTC41PQ6P2S7 1318 aa11.67□□□□□ -0.54
PALB2-201ENST00000261584 FLT4P35916 1363 aa11.67□□□□□ -0.54
PALB2-201ENST00000261584 EPHA10Q5JZY3 1008 aa11.67□□□□□ -0.54
PALB2-201ENST00000261584 TOM1L2Q6ZVM7 507 aa11.67□□□□□ -0.54
PALB2-201ENST00000261584 PUS7Q96PZ0 661 aaKnown RBP11.67□□□□□ -0.54
PALB2-201ENST00000261584 ZSCAN16Q9H4T2 348 aaPredicted RBP11.67□□□□□ -0.54
PALB2-201ENST00000261584 VPS18Q9P253 973 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms