RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 NME9Q86XW9 330 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 JAKMIP2Q96AA8 810 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 KAT14Q9H8E8 782 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 IDH1O75874 414 aaKnown RBP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 NEK1Q96PY6 1258 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 IBTKQ9P2D0 1353 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 CCDC102BQ68D86 513 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 CWC27Q6UX04 472 aaKnown RBP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 ZSCAN30Q86W11 494 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 PDILTQ8N807 584 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 TMEM87BQ96K49 555 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 NBPF14Q5TI25 921 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 PAXIP1Q6ZW49 1069 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 PDCL3Q9H2J4 239 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 DDX21Q9NR30 783 aaKnown RBP eCLIP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 MAP3K2Q9Y2U5 619 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 LRRFIP2Q9Y608 721 aaKnown RBP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 MROH5Q6ZUA9 1318 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 NUTM2GQ5VZR2 741 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 GALNT17Q6IS24 598 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 ZNF713Q8N859 430 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 MYD88Q99836 296 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 BCAR3O75815 825 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 UBE2Q2Q8WVN8 375 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 KIAA1328Q86T90 577 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 OGFOD1Q8N543 542 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 SLC17A8Q8NDX2 589 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 PLBD2Q8NHP8 589 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 DCTPP1Q9H773 170 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 RGS12O14924 1447 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 EIF5P55010 431 aaKnown RBP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 NCBP1Q09161 790 aaKnown RBP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 KLHL40Q2TBA0 621 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 NBPF6Q5VWK0 638 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 NBPF5PQ86XG9 351 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 FAM177A1Q8N128 213 aaPredicted RBP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 NBPF4Q96M43 638 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 PRPF40AO75400 957 aaKnown RBP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 IARSP41252 1262 aaKnown RBP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 RBM5P52756 815 aaKnown RBP eCLIP4.95□□□□□ -1.62
VPS13C-202ENST00000261517 WDR66Q8TBY9 1149 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 CDCA7LQ96GN5 454 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 GOLGA8AA7E2F4 631 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 GOLGA8BA8MQT2 603 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 TBC1D5Q92609 795 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 FIBPO43427 364 aa4.95□□□□□ -1.62
VPS13C-202ENST00000261517 SSFA2P28290 1259 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 SMC5Q8IY18 1101 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 WAPLQ7Z5K2 1190 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 RBM17Q96I25 401 aaKnown RBP4.94□□□□□ -1.62
VPS13C-202ENST00000261517 FOXD4L1Q9NU39 408 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 IFIT3O14879 490 aaKnown RBP4.94□□□□□ -1.62
VPS13C-202ENST00000261517 SPATA31E1Q6ZUB1 1445 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 STX6O43752 255 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 POLD1P28340 1107 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 PAFAH1B1P43034 410 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 NUP133Q8WUM0 1156 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 DDB1Q16531 1140 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 VWA3BQ502W6 1294 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 MRPL50Q8N5N7 158 aaKnown RBP4.94□□□□□ -1.62
VPS13C-202ENST00000261517 CGNQ9P2M7 1197 aaKnown RBP4.94□□□□□ -1.62
VPS13C-202ENST00000261517 EIF3DO15371 548 aaKnown RBP eCLIP4.94□□□□□ -1.625e-6■□□□□ 8.9
VPS13C-202ENST00000261517 METAP2P50579 478 aaKnown RBP eCLIP4.94□□□□□ -1.62
VPS13C-202ENST00000261517 SEMA3EO15041 775 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 PPP1R2P3Q6NXS1 205 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 LDHAL6AQ6ZMR3 332 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 GABPB2Q8TAK5 448 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-202ENST00000261517 MAGEF1Q9HAY2 307 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 C6orf50Q9HD87 102 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 RTCBQ9Y3I0 505 aaKnown RBP4.94□□□□□ -1.62
VPS13C-202ENST00000261517 ATP2B3Q16720 1220 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 TTC6Q86TZ1 520 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 THRAP3Q9Y2W1 955 aaKnown RBP4.94□□□□□ -1.62
VPS13C-202ENST00000261517 SEMA3FQ13275 785 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 WTAPQ15007 396 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 ZNF592Q92610 1267 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 RASAL2Q9UJF2 1139 aa4.94□□□□□ -1.62
VPS13C-202ENST00000261517 TMEM67Q5HYA8 995 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 RHPN1Q8TCX5 695 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 ATG3Q9NT62 314 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 AK9Q5TCS8 1911 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 H0YCG3 227 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 RRP9O43818 475 aaKnown RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 ZNF771Q7L3S4 317 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 NAP1L3Q99457 506 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 NUCKS1Q9H1E3 243 aaKnown RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 ARHGEF40Q8TER5 1519 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 RPL13P26373 211 aaKnown RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 UBA7P41226 1012 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 PPP2R5EQ16537 467 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 FCHSD1Q86WN1 690 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 ZSCAN29Q8IWY8 852 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 MAP4K4O95819 1239 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 TOP1P11387 765 aaKnown RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 RABGAP1Q9Y3P9 1069 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 KDM6BO15054 1643 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 RTN1Q16799 776 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-202ENST00000261517 PSMA7O14818 248 aa4.93□□□□□ -1.62
VPS13C-202ENST00000261517 STAMBPO95630 424 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms