RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 TBC1D9Q6ZT07 1266 aa20.43■□□□□ 0.86
HLA-F-216ENST00000259951 ANKRD18AQ8IVF6 992 aa20.43■□□□□ 0.86
HLA-F-216ENST00000259951 CNTROBQ8N137 903 aa20.43■□□□□ 0.86
HLA-F-216ENST00000259951 NEUROD6Q96NK8 337 aa20.43■□□□□ 0.86
HLA-F-216ENST00000259951 DBNLQ9UJU6 430 aaKnown RBP20.43■□□□□ 0.86
HLA-F-216ENST00000259951 PRR5LQ6MZQ0 368 aa20.42■□□□□ 0.86
HLA-F-216ENST00000259951 RILPL2Q969X0 211 aa20.42■□□□□ 0.86
HLA-F-216ENST00000259951 TLR7Q9NYK1 1049 aaKnown RBP20.42■□□□□ 0.86
HLA-F-216ENST00000259951 A0A1B0GUL7 405 aa20.42■□□□□ 0.86
HLA-F-216ENST00000259951 ATP5JP18859 108 aa20.42■□□□□ 0.86
HLA-F-216ENST00000259951 POLRMTO00411 1230 aaKnown RBP20.41■□□□□ 0.86
HLA-F-216ENST00000259951 PDE8BO95263 885 aa20.41■□□□□ 0.86
HLA-F-216ENST00000259951 ATP2B3Q16720 1220 aa20.41■□□□□ 0.86
HLA-F-216ENST00000259951 C3orf67Q6ZVT6 689 aa20.41■□□□□ 0.86
HLA-F-216ENST00000259951 DDX46Q7L014 1031 aaKnown RBP20.41■□□□□ 0.86
HLA-F-216ENST00000259951 DBNDD2Q9BQY9 259 aa20.41■□□□□ 0.86
HLA-F-216ENST00000259951 TNRC6CQ9HCJ0 1690 aaKnown RBP20.4■□□□□ 0.86
HLA-F-216ENST00000259951 TIMM10P62072 90 aa20.4■□□□□ 0.86
HLA-F-216ENST00000259951 ANO8Q9HCE9 1232 aaPredicted RBP20.4■□□□□ 0.86
HLA-F-216ENST00000259951 NRXN2Q9P2S2 1712 aa20.4■□□□□ 0.86
HLA-F-216ENST00000259951 DDR1Q08345 913 aa20.39■□□□□ 0.86
HLA-F-216ENST00000259951 GORABQ5T7V8 394 aa20.39■□□□□ 0.86
HLA-F-216ENST00000259951 VGLL2Q8N8G2 317 aa20.39■□□□□ 0.86
HLA-F-216ENST00000259951 EVI5LQ96CN4 794 aa20.39■□□□□ 0.86
HLA-F-216ENST00000259951 BSDC1Q9NW68 430 aaPredicted RBP20.39■□□□□ 0.86
HLA-F-216ENST00000259951 SEC24BO95487 1268 aa20.38■□□□□ 0.85
HLA-F-216ENST00000259951 PUM3Q15397 648 aaKnown RBP20.38■□□□□ 0.85
HLA-F-216ENST00000259951 CCDC158Q5M9N0 1113 aa20.38■□□□□ 0.85
HLA-F-216ENST00000259951 TAF1P21675 1872 aa20.38■□□□□ 0.85
HLA-F-216ENST00000259951 ARAP2Q8WZ64 1704 aa20.38■□□□□ 0.85
HLA-F-216ENST00000259951 RPS8P62241 208 aaKnown RBP20.38■□□□□ 0.85
HLA-F-216ENST00000259951 CCDC24Q8N4L8 307 aa20.38■□□□□ 0.85
HLA-F-216ENST00000259951 PARP3Q9Y6F1 533 aa20.38■□□□□ 0.85
HLA-F-216ENST00000259951 MFAP1P55081 439 aaKnown RBP20.37■□□□□ 0.85
HLA-F-216ENST00000259951 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.37■□□□□ 0.85
HLA-F-216ENST00000259951 LPIN2Q92539 896 aa20.37■□□□□ 0.85
HLA-F-216ENST00000259951 XAGE2Q96GT9 111 aa20.37■□□□□ 0.85
HLA-F-216ENST00000259951 BOLA2Q9H3K6 86 aa20.37■□□□□ 0.85
HLA-F-216ENST00000259951 ANP32AP39687 249 aaKnown RBP20.36■□□□□ 0.85
HLA-F-216ENST00000259951 RPGRQ92834 1020 aaKnown RBP20.36■□□□□ 0.85
HLA-F-216ENST00000259951 A0A1B0GUL6 1792 aa20.36■□□□□ 0.85
HLA-F-216ENST00000259951 MAP4K4O95819 1239 aaPredicted RBP20.35■□□□□ 0.85
HLA-F-216ENST00000259951 SLC5A1P13866 664 aa20.35■□□□□ 0.85
HLA-F-216ENST00000259951 PSDA5PKW4 1024 aaPredicted RBP20.35■□□□□ 0.85
HLA-F-216ENST00000259951 HIP1O00291 1037 aa20.35■□□□□ 0.85
HLA-F-216ENST00000259951 MMP10P09238 476 aa20.35■□□□□ 0.85
HLA-F-216ENST00000259951 CHMLP26374 656 aa20.35■□□□□ 0.85
HLA-F-216ENST00000259951 CHRNDQ07001 517 aa20.35■□□□□ 0.85
HLA-F-216ENST00000259951 CRY2Q49AN0 593 aa20.35■□□□□ 0.85
HLA-F-216ENST00000259951 TTC39AQ5SRH9 613 aa20.35■□□□□ 0.85
HLA-F-216ENST00000259951 CELF1Q92879 486 aaKnown RBP20.35■□□□□ 0.85
HLA-F-216ENST00000259951 HAUS7Q99871 368 aa20.35■□□□□ 0.85
HLA-F-216ENST00000259951 REC8O95072 547 aa20.34■□□□□ 0.85
HLA-F-216ENST00000259951 IFIT1P09914 478 aaKnown RBP20.34■□□□□ 0.85
HLA-F-216ENST00000259951 FGFR2P21802 821 aa20.34■□□□□ 0.85
HLA-F-216ENST00000259951 GRAPQ13588 217 aa20.34■□□□□ 0.85
HLA-F-216ENST00000259951 GRAPLQ8TC17 118 aaPredicted RBP20.34■□□□□ 0.85
HLA-F-216ENST00000259951 RBM17Q96I25 401 aaKnown RBP20.34■□□□□ 0.85
HLA-F-216ENST00000259951 BRIP1Q9BX63 1249 aa20.34■□□□□ 0.85
HLA-F-216ENST00000259951 TICAM2Q86XR7 235 aa20.33■□□□□ 0.84
HLA-F-216ENST00000259951 HELBQ8NG08 1087 aaPredicted RBP20.33■□□□□ 0.84
HLA-F-216ENST00000259951 ANKRD2Q9GZV1 360 aa20.33■□□□□ 0.84
HLA-F-216ENST00000259951 ANKRD31Q8N7Z5 1873 aa20.32■□□□□ 0.84
HLA-F-216ENST00000259951 KLRG2A4D1S0 409 aaPredicted RBP20.32■□□□□ 0.84
HLA-F-216ENST00000259951 RUFY2Q8WXA3 655 aa20.32■□□□□ 0.84
HLA-F-216ENST00000259951 ZNF512BQ96KM6 892 aaPredicted RBP20.32■□□□□ 0.84
HLA-F-216ENST00000259951 MINPP1Q9UNW1 487 aa20.32■□□□□ 0.84
HLA-F-216ENST00000259951 COL4A1P02462 1669 aa20.32■□□□□ 0.84
HLA-F-216ENST00000259951 ADORA1P30542 326 aa20.31■□□□□ 0.84
HLA-F-216ENST00000259951 TBC1D32Q96NH3 1257 aa20.31■□□□□ 0.84
HLA-F-216ENST00000259951 C22orf23Q9BZE7 217 aa20.31■□□□□ 0.84
HLA-F-216ENST00000259951 DIAPH3Q9NSV4 1193 aa20.31■□□□□ 0.84
HLA-F-216ENST00000259951 RFX7Q2KHR2 1363 aa20.31■□□□□ 0.84
HLA-F-216ENST00000259951 TAF5LO75529 589 aa20.31■□□□□ 0.84
HLA-F-216ENST00000259951 UQCRFS1P1P0C7P4 283 aa20.31■□□□□ 0.84
HLA-F-216ENST00000259951 HOXA10P31260 410 aaPredicted RBP20.31■□□□□ 0.84
HLA-F-216ENST00000259951 PDE6BP35913 854 aa20.31■□□□□ 0.84
HLA-F-216ENST00000259951 UBE4AQ14139 1066 aa20.31■□□□□ 0.84
HLA-F-216ENST00000259951 R3HDM1Q15032 1099 aaKnown RBP20.31■□□□□ 0.84
HLA-F-216ENST00000259951 MSL1Q68DK7 614 aa20.31■□□□□ 0.84
HLA-F-216ENST00000259951 SLC16A10Q8TF71 515 aa20.31■□□□□ 0.84
HLA-F-216ENST00000259951 DNAJC2Q99543 621 aaKnown RBP20.31■□□□□ 0.84
HLA-F-216ENST00000259951 ESYT1Q9BSJ8 1104 aa20.31■□□□□ 0.84
HLA-F-216ENST00000259951 FSD1Q9BTV5 496 aa20.31■□□□□ 0.84
HLA-F-216ENST00000259951 CRAMP1Q96RY5 1269 aa20.3■□□□□ 0.84
HLA-F-216ENST00000259951 PAG1Q9NWQ8 432 aa20.29■□□□□ 0.84
HLA-F-216ENST00000259951 BBOX1O75936 387 aa20.28■□□□□ 0.84
HLA-F-216ENST00000259951 LRRFIP1Q32MZ4 808 aaKnown RBP20.28■□□□□ 0.84
HLA-F-216ENST00000259951 TMC4Q7Z404 712 aa20.28■□□□□ 0.84
HLA-F-216ENST00000259951 CCDC102BQ68D86 513 aa20.27■□□□□ 0.84
HLA-F-216ENST00000259951 AKAP11Q9UKA4 1901 aa20.27■□□□□ 0.84
HLA-F-216ENST00000259951 EPB41L2O43491 1005 aaKnown RBP20.27■□□□□ 0.83
HLA-F-216ENST00000259951 ARID4AP29374 1257 aaPredicted RBP20.27■□□□□ 0.83
HLA-F-216ENST00000259951 KCNJ4P48050 445 aa20.27■□□□□ 0.83
HLA-F-216ENST00000259951 KBTBD3Q8NAB2 608 aa20.27■□□□□ 0.83
HLA-F-216ENST00000259951 NPR1P16066 1061 aa20.26■□□□□ 0.83
HLA-F-216ENST00000259951 RBM25P49756 843 aaKnown RBP20.26■□□□□ 0.83
HLA-F-216ENST00000259951 GOLIM4O00461 696 aa20.25■□□□□ 0.83
HLA-F-216ENST00000259951 FKBP4Q02790 459 aaKnown RBP eCLIP20.25■□□□□ 0.83
HLA-F-216ENST00000259951 DDRGK1Q96HY6 314 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms