RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 MCMDC2Q4G0Z9 681 aa15.35■□□□□ 0.05
ALPK3-201ENST00000258888 EIF2AK4Q9P2K8 1649 aaKnown RBP15.35■□□□□ 0.05
ALPK3-201ENST00000258888 PRAG1Q86YV5 1406 aa15.35■□□□□ 0.05
ALPK3-201ENST00000258888 ATP2B3Q16720 1220 aa15.35■□□□□ 0.05
ALPK3-201ENST00000258888 EXOC5O00471 708 aa15.35■□□□□ 0.05
ALPK3-201ENST00000258888 HEATR3Q7Z4Q2 680 aa15.35■□□□□ 0.05
ALPK3-201ENST00000258888 GRM8O00222 908 aa15.35■□□□□ 0.05
ALPK3-201ENST00000258888 LMOD1P29536 600 aaPredicted RBP15.35■□□□□ 0.05
ALPK3-201ENST00000258888 ATP8B2P98198 1209 aa15.35■□□□□ 0.05
ALPK3-201ENST00000258888 ZGPATQ8N5A5 531 aaKnown RBP15.35■□□□□ 0.05
ALPK3-201ENST00000258888 SLC4A4Q9Y6R1 1079 aa15.35■□□□□ 0.05
ALPK3-201ENST00000258888 GPATCH8Q9UKJ3 1502 aaKnown RBP15.35■□□□□ 0.05
ALPK3-201ENST00000258888 CYP7A1P22680 504 aa15.35■□□□□ 0.05
ALPK3-201ENST00000258888 COPS6Q7L5N1 327 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 DNAI2Q9GZS0 605 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.34■□□□□ 0.05
ALPK3-201ENST00000258888 RAPGEF6Q8TEU7 1601 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 CLCN1P35523 988 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 MCM6Q14566 821 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 TEX13AQ9BXU3 409 aaPredicted RBP15.34■□□□□ 0.05
ALPK3-201ENST00000258888 ZFYP08048 801 aaPredicted RBP15.34■□□□□ 0.05
ALPK3-201ENST00000258888 ASIC1P78348 528 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 IFIT1BQ5T764 474 aaKnown RBP15.34■□□□□ 0.05
ALPK3-201ENST00000258888 NBPF6Q5VWK0 638 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 NBPF5PQ86XG9 351 aaPredicted RBP15.34■□□□□ 0.05
ALPK3-201ENST00000258888 NBPF4Q96M43 638 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.34■□□□□ 0.05
ALPK3-201ENST00000258888 LDHCP07864 332 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 UQCRFS1P1P0C7P4 283 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 ATP2C2O75185 946 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 DCAF8L1A6NGE4 600 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 ERMNQ8TAM6 284 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 ARFGAP3Q9NP61 516 aa15.34■□□□□ 0.05
ALPK3-201ENST00000258888 RAB3GAP1Q15042 981 aa15.33■□□□□ 0.05
ALPK3-201ENST00000258888 ESR2Q92731 530 aa15.33■□□□□ 0.05
ALPK3-201ENST00000258888 CCDC97Q96F63 343 aaPredicted RBP15.33■□□□□ 0.05
ALPK3-201ENST00000258888 BIVM-ERCC5R4GMW8 1640 aa15.33■□□□□ 0.05
ALPK3-201ENST00000258888 HLA-DOAP06340 250 aa15.33■□□□□ 0.05
ALPK3-201ENST00000258888 STXBP4Q6ZWJ1 553 aa15.33■□□□□ 0.04
ALPK3-201ENST00000258888 PAG1Q9NWQ8 432 aa15.33■□□□□ 0.04
ALPK3-201ENST00000258888 HSF2BPO75031 334 aa15.33■□□□□ 0.04
ALPK3-201ENST00000258888 NF2P35240 595 aa15.33■□□□□ 0.04
ALPK3-201ENST00000258888 SPAG5Q96R06 1193 aa15.33■□□□□ 0.04
ALPK3-201ENST00000258888 CTAGE1Q96RT6 745 aa15.33■□□□□ 0.04
ALPK3-201ENST00000258888 CHST3Q7LGC8 479 aa15.33■□□□□ 0.04
ALPK3-201ENST00000258888 TTC21AQ8NDW8 1320 aa15.33■□□□□ 0.04
ALPK3-201ENST00000258888 FSD2A1L4K1 749 aa15.33■□□□□ 0.04
ALPK3-201ENST00000258888 CCDC152Q4G0S7 254 aa15.33■□□□□ 0.04
ALPK3-201ENST00000258888 ALDH1L1O75891 902 aa15.33■□□□□ 0.04
ALPK3-201ENST00000258888 CKAP4Q07065 602 aaKnown RBP15.33■□□□□ 0.04
ALPK3-201ENST00000258888 CTAGE15A4D2H0 777 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 CTAGE8P0CG41 777 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 TSPY3P0CV98 308 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 TSPY8P0CW00 308 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 CTAGE6Q86UF2 777 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 CTAGE4Q8IX94 777 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 IPO4Q8TEX9 1081 aaKnown RBP15.32■□□□□ 0.04
ALPK3-201ENST00000258888 ZKSCAN5Q9Y2L8 839 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 PTPRKQ15262 1439 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 TTLL12Q14166 644 aaPredicted RBP15.32■□□□□ 0.04
ALPK3-201ENST00000258888 SPTLC2O15270 562 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 ZBTB9Q96C00 473 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 FERMT2Q96AC1 680 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 DENND4BO75064 1496 aaPredicted RBP15.32■□□□□ 0.04
ALPK3-201ENST00000258888 BMP15O95972 392 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 CEP85Q6P2H3 762 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 LMBR1LQ6UX01 489 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 CNNM2Q9H8M5 875 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 BICD1Q96G01 975 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 AK2P54819 239 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 SLC9C2Q5TAH2 1124 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 TSPYL6Q8N831 410 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 SBNO2Q9Y2G9 1366 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 NBPF7P0C2Y1 421 aaPredicted RBP15.32■□□□□ 0.04
ALPK3-201ENST00000258888 SPECC1LQ69YQ0 1117 aa15.32■□□□□ 0.04
ALPK3-201ENST00000258888 SYCP2Q9BX26 1530 aa15.31■□□□□ 0.04
ALPK3-201ENST00000258888 EIF4A2Q14240 407 aaKnown RBP15.31■□□□□ 0.04
ALPK3-201ENST00000258888 KSR2Q6VAB6 950 aa15.31■□□□□ 0.04
ALPK3-201ENST00000258888 DHX58Q96C10 678 aa15.31■□□□□ 0.04
ALPK3-201ENST00000258888 UGGT2Q9NYU1 1516 aa15.31■□□□□ 0.04
ALPK3-201ENST00000258888 BBXQ8WY36 941 aaPredicted RBP15.31■□□□□ 0.04
ALPK3-201ENST00000258888 CYLC1P35663 651 aaPredicted RBP15.31■□□□□ 0.04
ALPK3-201ENST00000258888 LRRC27Q9C0I9 530 aa15.31■□□□□ 0.04
ALPK3-201ENST00000258888 ARID5AQ03989 594 aa15.31■□□□□ 0.04
ALPK3-201ENST00000258888 MSH6P52701 1360 aa15.31■□□□□ 0.04
ALPK3-201ENST00000258888 SMC5Q8IY18 1101 aa15.31■□□□□ 0.04
ALPK3-201ENST00000258888 NGLY1Q96IV0 654 aa15.31■□□□□ 0.04
ALPK3-201ENST00000258888 CTAGE9A4FU28 777 aa15.3■□□□□ 0.04
ALPK3-201ENST00000258888 GIGYF2Q6Y7W6 1299 aaKnown RBP15.3■□□□□ 0.04
ALPK3-201ENST00000258888 TBC1D5Q92609 795 aa15.3■□□□□ 0.04
ALPK3-201ENST00000258888 CAPZA3Q96KX2 299 aa15.3■□□□□ 0.04
ALPK3-201ENST00000258888 SEC24BO95487 1268 aa15.3■□□□□ 0.04
ALPK3-201ENST00000258888 SPAG1Q07617 926 aa15.3■□□□□ 0.04
ALPK3-201ENST00000258888 APOBRQ0VD83 1088 aa15.3■□□□□ 0.04
ALPK3-201ENST00000258888 KRT24Q2M2I5 525 aa15.3■□□□□ 0.04
ALPK3-201ENST00000258888 PLEKHM2Q8IWE5 1019 aa15.3■□□□□ 0.04
ALPK3-201ENST00000258888 GSTO1P78417 241 aa15.3■□□□□ 0.04
ALPK3-201ENST00000258888 KIAA0753Q2KHM9 967 aa15.3■□□□□ 0.04
ALPK3-201ENST00000258888 MYCNP04198 464 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms