RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 THRAP3Q9Y2W1 955 aaKnown RBP30.08■■■□□ 2.41
TMEM55B-201ENST00000250489 KAT6BQ8WYB5 2073 aa30.08■■■□□ 2.41
TMEM55B-201ENST00000250489 IL6STP40189 918 aaPredicted RBP30.08■■■□□ 2.41
TMEM55B-201ENST00000250489 TAF7LQ5H9L4 462 aa30.08■■■□□ 2.41
TMEM55B-201ENST00000250489 MBD3O95983 291 aa30.07■■■□□ 2.4
TMEM55B-201ENST00000250489 GJB2P29033 226 aa30.07■■■□□ 2.4
TMEM55B-201ENST00000250489 NUP98P52948 1817 aa30.06■■■□□ 2.4
TMEM55B-201ENST00000250489 ERVV-1B6SEH8 477 aa30.06■■■□□ 2.4
TMEM55B-201ENST00000250489 ZMYM1Q5SVZ6 1142 aa30.06■■■□□ 2.4
TMEM55B-201ENST00000250489 DDB1Q16531 1140 aa30.05■■■□□ 2.4
TMEM55B-201ENST00000250489 NECAB1Q8N987 351 aa30.05■■■□□ 2.4
TMEM55B-201ENST00000250489 TTLL11Q8NHH1 800 aa30.05■■■□□ 2.4
TMEM55B-201ENST00000250489 NSFL1CQ9UNZ2 370 aaKnown RBP30.05■■■□□ 2.4
TMEM55B-201ENST00000250489 RIC1Q4ADV7 1423 aa30.05■■■□□ 2.4
TMEM55B-201ENST00000250489 ADORA1P30542 326 aa30.04■■■□□ 2.4
TMEM55B-201ENST00000250489 TOB2Q14106 344 aaPredicted RBP30.04■■■□□ 2.4
TMEM55B-201ENST00000250489 DZIP3Q86Y13 1208 aaKnown RBP30.04■■■□□ 2.4
TMEM55B-201ENST00000250489 XAGE2Q96GT9 111 aa30.04■■■□□ 2.4
TMEM55B-201ENST00000250489 TCEANC2Q96MN5 208 aa30.04■■■□□ 2.4
TMEM55B-201ENST00000250489 RBM27Q9P2N5 1060 aaKnown RBP30.04■■■□□ 2.4
TMEM55B-201ENST00000250489 CCDC158Q5M9N0 1113 aa30.04■■■□□ 2.4
TMEM55B-201ENST00000250489 CYP21A2P08686 494 aa30.03■■■□□ 2.4
TMEM55B-201ENST00000250489 CTSWP56202 376 aa30.03■■■□□ 2.4
TMEM55B-201ENST00000250489 FOXD4L6Q3SYB3 417 aaPredicted RBP30.03■■■□□ 2.4
TMEM55B-201ENST00000250489 SLFNL1Q499Z3 407 aa30.03■■■□□ 2.4
TMEM55B-201ENST00000250489 FOXD4L3Q6VB84 417 aaPredicted RBP30.03■■■□□ 2.4
TMEM55B-201ENST00000250489 RTN4Q9NQC3 1192 aaKnown RBP30.03■■■□□ 2.4
TMEM55B-201ENST00000250489 NEK1Q96PY6 1258 aa30.03■■■□□ 2.4
TMEM55B-201ENST00000250489 GREM2Q9H772 168 aa30.03■■■□□ 2.4
TMEM55B-201ENST00000250489 TBC1D2BQ9UPU7 963 aa30.03■■■□□ 2.4
TMEM55B-201ENST00000250489 MYH3P11055 1940 aa30.02■■■□□ 2.4
TMEM55B-201ENST00000250489 IRS4O14654 1257 aaPredicted RBP30.02■■■□□ 2.4
TMEM55B-201ENST00000250489 RNF113AO15541 343 aaKnown RBP30.02■■■□□ 2.4
TMEM55B-201ENST00000250489 F13A1P00488 732 aa30.02■■■□□ 2.4
TMEM55B-201ENST00000250489 ITGA6P23229 1130 aa30.02■■■□□ 2.4
TMEM55B-201ENST00000250489 TTC39AQ5SRH9 613 aa30.02■■■□□ 2.4
TMEM55B-201ENST00000250489 TMEM63CQ9P1W3 806 aa30.02■■■□□ 2.4
TMEM55B-201ENST00000250489 TRMT112Q9UI30 125 aaKnown RBP30.02■■■□□ 2.4
TMEM55B-201ENST00000250489 GORABQ5T7V8 394 aa30.01■■■□□ 2.4
TMEM55B-201ENST00000250489 DSCC1Q9BVC3 393 aa30.01■■■□□ 2.4
TMEM55B-201ENST00000250489 RIPOR2Q9Y4F9 1068 aa30.01■■■□□ 2.4
TMEM55B-201ENST00000250489 TMEM87AQ8NBN3 555 aa30.01■■■□□ 2.39
TMEM55B-201ENST00000250489 ZNF34Q8IZ26 560 aa30■■■□□ 2.39
TMEM55B-201ENST00000250489 MTMR6Q9Y217 621 aa30■■■□□ 2.39
TMEM55B-201ENST00000250489 UBN2Q6ZU65 1347 aa30■■■□□ 2.39
TMEM55B-201ENST00000250489 ANKRD18BA2A2Z9 1011 aa29.99■■■□□ 2.39
TMEM55B-201ENST00000250489 GDPD2Q9HCC8 539 aa29.99■■■□□ 2.39
TMEM55B-201ENST00000250489 MAST3O60307 1309 aa29.99■■■□□ 2.39
TMEM55B-201ENST00000250489 USP48Q86UV5 1035 aa29.99■■■□□ 2.39
TMEM55B-201ENST00000250489 MARCH10Q8NA82 808 aaPredicted RBP29.99■■■□□ 2.39
TMEM55B-201ENST00000250489 SPATA31A5Q5VU36 1347 aa29.99■■■□□ 2.39
TMEM55B-201ENST00000250489 SPATA31A7Q8IWB4 1347 aa29.99■■■□□ 2.39
TMEM55B-201ENST00000250489 PDE8AO60658 829 aa29.98■■■□□ 2.39
TMEM55B-201ENST00000250489 DTNBO60941 627 aa29.98■■■□□ 2.39
TMEM55B-201ENST00000250489 EIF5P55010 431 aaKnown RBP29.98■■■□□ 2.39
TMEM55B-201ENST00000250489 FKBP4Q02790 459 aaKnown RBP eCLIP29.98■■■□□ 2.39
TMEM55B-201ENST00000250489 METTL24Q5JXM2 366 aa29.98■■■□□ 2.39
TMEM55B-201ENST00000250489 LDHAL6AQ6ZMR3 332 aa29.98■■■□□ 2.39
TMEM55B-201ENST00000250489 ATP2B3Q16720 1220 aa29.97■■■□□ 2.39
TMEM55B-201ENST00000250489 INTS5Q6P9B9 1019 aaKnown RBP29.97■■■□□ 2.39
TMEM55B-201ENST00000250489 ATP6V1DQ9Y5K8 247 aa29.97■■■□□ 2.39
TMEM55B-201ENST00000250489 ACSBG1Q96GR2 724 aa29.97■■■□□ 2.39
TMEM55B-201ENST00000250489 CCDC87Q9NVE4 849 aa29.97■■■□□ 2.39
TMEM55B-201ENST00000250489 ABCC12Q96J65 1359 aa29.97■■■□□ 2.39
TMEM55B-201ENST00000250489 SLIT2O94813 1529 aa29.96■■■□□ 2.39
TMEM55B-201ENST00000250489 NWD2Q9ULI1 1742 aa29.96■■■□□ 2.39
TMEM55B-201ENST00000250489 CNPY2Q9Y2B0 182 aa29.96■■■□□ 2.39
TMEM55B-201ENST00000250489 RREB1Q92766 1687 aa29.96■■■□□ 2.39
TMEM55B-201ENST00000250489 GADD45BO75293 160 aaPredicted RBP29.95■■■□□ 2.39
TMEM55B-201ENST00000250489 SCARF1Q14162 830 aa29.95■■■□□ 2.39
TMEM55B-201ENST00000250489 STOX1Q6ZVD7 989 aa29.95■■■□□ 2.39
TMEM55B-201ENST00000250489 TCHHQ07283 1943 aa29.95■■■□□ 2.38
TMEM55B-201ENST00000250489 NUTM2BA6NNL0 878 aaPredicted RBP29.95■■■□□ 2.38
TMEM55B-201ENST00000250489 NUTM2EB1AL46 878 aaPredicted RBP29.95■■■□□ 2.38
TMEM55B-201ENST00000250489 HSPD1P10809 573 aaKnown RBP29.95■■■□□ 2.38
TMEM55B-201ENST00000250489 LRRFIP1Q32MZ4 808 aaKnown RBP29.95■■■□□ 2.38
TMEM55B-201ENST00000250489 NUTM2AQ8IVF1 878 aaPredicted RBP29.95■■■□□ 2.38
TMEM55B-201ENST00000250489 FAM43AQ8N2R8 423 aa29.95■■■□□ 2.38
TMEM55B-201ENST00000250489 A0A0G2JS52 829 aa29.94■■■□□ 2.38
TMEM55B-201ENST00000250489 M0R2C6 588 aa29.94■■■□□ 2.38
TMEM55B-201ENST00000250489 CNNM1Q9NRU3 951 aa29.94■■■□□ 2.38
TMEM55B-201ENST00000250489 CICQ96RK0 1608 aaPredicted RBP29.94■■■□□ 2.38
TMEM55B-201ENST00000250489 PDIA4P13667 645 aaKnown RBP29.94■■■□□ 2.38
TMEM55B-201ENST00000250489 ATP6V1AP38606 617 aa29.94■■■□□ 2.38
TMEM55B-201ENST00000250489 BARGINQ6ZT62 677 aa29.94■■■□□ 2.38
TMEM55B-201ENST00000250489 VGLL2Q8N8G2 317 aa29.94■■■□□ 2.38
TMEM55B-201ENST00000250489 CRKLP46109 303 aaKnown RBP29.93■■■□□ 2.38
TMEM55B-201ENST00000250489 NASPP49321 788 aaPredicted RBP29.93■■■□□ 2.38
TMEM55B-201ENST00000250489 Q6ZUG5 572 aa29.93■■■□□ 2.38
TMEM55B-201ENST00000250489 OSBP2Q969R2 916 aa29.93■■■□□ 2.38
TMEM55B-201ENST00000250489 LRP5O75197 1615 aa29.93■■■□□ 2.38
TMEM55B-201ENST00000250489 LAMA4Q16363 1823 aa29.92■■■□□ 2.38
TMEM55B-201ENST00000250489 LOC102724428A0A0B4J2F2 783 aa29.92■■■□□ 2.38
TMEM55B-201ENST00000250489 ZFYP08048 801 aaPredicted RBP29.92■■■□□ 2.38
TMEM55B-201ENST00000250489 HMGB1P09429 215 aaKnown RBP29.92■■■□□ 2.38
TMEM55B-201ENST00000250489 ZAP70P43403 619 aa29.92■■■□□ 2.38
TMEM55B-201ENST00000250489 SIK1P57059 783 aa29.92■■■□□ 2.38
TMEM55B-201ENST00000250489 VPS37CA5D8V6 355 aaPredicted RBP29.91■■■□□ 2.38
TMEM55B-201ENST00000250489 LARP1BQ659C4 914 aaKnown RBP29.91■■■□□ 2.38
TMEM55B-201ENST00000250489 LRSAM1Q6UWE0 723 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 514.3 ms