RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 PDE8BO95263 885 aa17.23■□□□□ 0.35
SDF2-201ENST00000247020 MAP4K4O95819 1239 aaPredicted RBP17.23■□□□□ 0.35
SDF2-201ENST00000247020 CCDC158Q5M9N0 1113 aa17.23■□□□□ 0.35
SDF2-201ENST00000247020 FLAD1Q8NFF5 587 aa17.23■□□□□ 0.35
SDF2-201ENST00000247020 MPHOSPH8Q99549 860 aa17.23■□□□□ 0.35
SDF2-201ENST00000247020 BOLA2Q9H3K6 86 aa17.23■□□□□ 0.35
SDF2-201ENST00000247020 TIMM10P62072 90 aa17.22■□□□□ 0.35
SDF2-201ENST00000247020 ATP2B3Q16720 1220 aa17.22■□□□□ 0.35
SDF2-201ENST00000247020 BICDL1Q6ZP65 573 aa17.22■□□□□ 0.35
SDF2-201ENST00000247020 IL27Q8NEV9 243 aa17.22■□□□□ 0.35
SDF2-201ENST00000247020 ZNF512BQ96KM6 892 aaPredicted RBP17.22■□□□□ 0.35
SDF2-201ENST00000247020 NLRP3Q96P20 1036 aa17.22■□□□□ 0.35
SDF2-201ENST00000247020 DIAPH3Q9NSV4 1193 aa17.22■□□□□ 0.35
SDF2-201ENST00000247020 GYS1P13807 737 aa17.21■□□□□ 0.35
SDF2-201ENST00000247020 SMIM5Q71RC9 77 aa17.21■□□□□ 0.35
SDF2-201ENST00000247020 DAXXQ9UER7 740 aaPredicted RBP17.21■□□□□ 0.35
SDF2-201ENST00000247020 MYH7P12883 1935 aa17.21■□□□□ 0.34
SDF2-201ENST00000247020 TNRC6CQ9HCJ0 1690 aaKnown RBP17.2■□□□□ 0.34
SDF2-201ENST00000247020 MSH5O43196 834 aa17.2■□□□□ 0.34
SDF2-201ENST00000247020 MCCP23508 829 aa17.2■□□□□ 0.34
SDF2-201ENST00000247020 PUM3Q15397 648 aaKnown RBP17.2■□□□□ 0.34
SDF2-201ENST00000247020 AKT1S1Q96B36 256 aa17.2■□□□□ 0.34
SDF2-201ENST00000247020 XAGE2Q96GT9 111 aa17.2■□□□□ 0.34
SDF2-201ENST00000247020 SNRKQ9NRH2 765 aa17.2■□□□□ 0.34
SDF2-201ENST00000247020 NRXN2Q9P2S2 1712 aa17.2■□□□□ 0.34
SDF2-201ENST00000247020 AKAP11Q9UKA4 1901 aa17.2■□□□□ 0.34
SDF2-201ENST00000247020 EP400Q96L91 3159 aa17.2■□□□□ 0.34
SDF2-201ENST00000247020 NFIXQ14938 502 aa17.19■□□□□ 0.34
SDF2-201ENST00000247020 LPIN2Q92539 896 aa17.19■□□□□ 0.34
SDF2-201ENST00000247020 FSD1Q9BTV5 496 aa17.19■□□□□ 0.34
SDF2-201ENST00000247020 SEC31BQ9NQW1 1179 aa17.19■□□□□ 0.34
SDF2-201ENST00000247020 IFIT1P09914 478 aaKnown RBP17.19■□□□□ 0.34
SDF2-201ENST00000247020 FGFR2P21802 821 aa17.19■□□□□ 0.34
SDF2-201ENST00000247020 ANAPC15P60006 121 aa17.19■□□□□ 0.34
SDF2-201ENST00000247020 GORABQ5T7V8 394 aa17.19■□□□□ 0.34
SDF2-201ENST00000247020 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
SDF2-201ENST00000247020 SNX21Q969T3 373 aa17.19■□□□□ 0.34
SDF2-201ENST00000247020 IL17RAQ96F46 866 aa17.19■□□□□ 0.34
SDF2-201ENST00000247020 KIF2CQ99661 725 aa17.19■□□□□ 0.34
SDF2-201ENST00000247020 BSDC1Q9NW68 430 aaPredicted RBP17.19■□□□□ 0.34
SDF2-201ENST00000247020 TM4SF1P30408 202 aa17.18■□□□□ 0.34
SDF2-201ENST00000247020 TTC39AQ5SRH9 613 aa17.18■□□□□ 0.34
SDF2-201ENST00000247020 CNBD1Q8NA66 436 aa17.18■□□□□ 0.34
SDF2-201ENST00000247020 KBTBD3Q8NAB2 608 aa17.18■□□□□ 0.34
SDF2-201ENST00000247020 ANO2Q9NQ90 1003 aa17.18■□□□□ 0.34
SDF2-201ENST00000247020 PAG1Q9NWQ8 432 aa17.18■□□□□ 0.34
SDF2-201ENST00000247020 SLC5A1P13866 664 aa17.17■□□□□ 0.34
SDF2-201ENST00000247020 RABEP1Q15276 862 aa17.17■□□□□ 0.34
SDF2-201ENST00000247020 LRRFIP1Q32MZ4 808 aaKnown RBP17.17■□□□□ 0.34
SDF2-201ENST00000247020 TAF1P21675 1872 aa17.17■□□□□ 0.34
SDF2-201ENST00000247020 UQCRFS1P1P0C7P4 283 aa17.16■□□□□ 0.34
SDF2-201ENST00000247020 CWC27Q6UX04 472 aaKnown RBP17.16■□□□□ 0.34
SDF2-201ENST00000247020 KIAA1211Q6ZU35 1233 aa17.16■□□□□ 0.34
SDF2-201ENST00000247020 TFCP2L1Q9NZI6 479 aa17.16■□□□□ 0.34
SDF2-201ENST00000247020 COL4A1P02462 1669 aa17.16■□□□□ 0.34
SDF2-201ENST00000247020 NPHP1O15259 732 aa17.15■□□□□ 0.34
SDF2-201ENST00000247020 ARID4AP29374 1257 aaPredicted RBP17.15■□□□□ 0.34
SDF2-201ENST00000247020 ST5P78524 1137 aa17.15■□□□□ 0.34
SDF2-201ENST00000247020 ZNF827Q17R98 1081 aa17.15■□□□□ 0.34
SDF2-201ENST00000247020 C3orf67Q6ZVT6 689 aa17.15■□□□□ 0.34
SDF2-201ENST00000247020 DNAJC2Q99543 621 aaKnown RBP17.15■□□□□ 0.34
SDF2-201ENST00000247020 DOCK2Q92608 1830 aa17.15■□□□□ 0.34
SDF2-201ENST00000247020 ADORA1P30542 326 aa17.15■□□□□ 0.34
SDF2-201ENST00000247020 CHRNDQ07001 517 aa17.15■□□□□ 0.34
SDF2-201ENST00000247020 PRR5LQ6MZQ0 368 aa17.15■□□□□ 0.34
SDF2-201ENST00000247020 NLGN1Q8N2Q7 840 aa17.15■□□□□ 0.34
SDF2-201ENST00000247020 LSG1Q9H089 658 aaKnown RBP17.15■□□□□ 0.34
SDF2-201ENST00000247020 MED23Q9ULK4 1368 aa17.14■□□□□ 0.34
SDF2-201ENST00000247020 SERPINB2P05120 415 aa17.14■□□□□ 0.33
SDF2-201ENST00000247020 NMIQ13287 307 aaPredicted RBP17.14■□□□□ 0.33
SDF2-201ENST00000247020 UBE4AQ14139 1066 aa17.14■□□□□ 0.33
SDF2-201ENST00000247020 DDX46Q7L014 1031 aaKnown RBP17.14■□□□□ 0.33
SDF2-201ENST00000247020 HSPA4P34932 840 aa17.13■□□□□ 0.33
SDF2-201ENST00000247020 RPS8P62241 208 aaKnown RBP17.13■□□□□ 0.33
SDF2-201ENST00000247020 HSCBQ8IWL3 235 aa17.13■□□□□ 0.33
SDF2-201ENST00000247020 TBC1D2Q9BYX2 928 aa17.13■□□□□ 0.33
SDF2-201ENST00000247020 IL25Q9H293 177 aa17.13■□□□□ 0.33
SDF2-201ENST00000247020 GOLIM4O00461 696 aa17.12■□□□□ 0.33
SDF2-201ENST00000247020 ZFYP08048 801 aaPredicted RBP17.12■□□□□ 0.33
SDF2-201ENST00000247020 TTF1Q15361 905 aaPredicted RBP17.12■□□□□ 0.33
SDF2-201ENST00000247020 ERICH6Q7L0X2 663 aa17.12■□□□□ 0.33
SDF2-201ENST00000247020 ANKRD2Q9GZV1 360 aa17.12■□□□□ 0.33
SDF2-201ENST00000247020 HELLSQ9NRZ9 838 aa17.12■□□□□ 0.33
SDF2-201ENST00000247020 CCDC171Q6TFL3 1326 aa17.11■□□□□ 0.33
SDF2-201ENST00000247020 POLRMTO00411 1230 aaKnown RBP17.11■□□□□ 0.33
SDF2-201ENST00000247020 ZBTB22O15209 634 aa17.11■□□□□ 0.33
SDF2-201ENST00000247020 CRY2Q49AN0 593 aa17.11■□□□□ 0.33
SDF2-201ENST00000247020 CCDC102BQ68D86 513 aa17.11■□□□□ 0.33
SDF2-201ENST00000247020 CELF1Q92879 486 aaKnown RBP17.11■□□□□ 0.33
SDF2-201ENST00000247020 EDC3Q96F86 508 aaKnown RBP17.11■□□□□ 0.33
SDF2-201ENST00000247020 CAMKK2Q96RR4 588 aa17.11■□□□□ 0.33
SDF2-201ENST00000247020 MYH13Q9UKX3 1938 aa17.11■□□□□ 0.33
SDF2-201ENST00000247020 ANKRD31Q8N7Z5 1873 aa17.11■□□□□ 0.33
SDF2-201ENST00000247020 A0A0D9SFI3 127 aa17.11■□□□□ 0.33
SDF2-201ENST00000247020 GRAPQ13588 217 aa17.11■□□□□ 0.33
SDF2-201ENST00000247020 COL23A1Q86Y22 540 aaPredicted RBP17.11■□□□□ 0.33
SDF2-201ENST00000247020 HELBQ8NG08 1087 aaPredicted RBP17.11■□□□□ 0.33
SDF2-201ENST00000247020 GRAPLQ8TC17 118 aaPredicted RBP17.11■□□□□ 0.33
SDF2-201ENST00000247020 FAM227BQ96M60 508 aa17.11■□□□□ 0.33
SDF2-201ENST00000247020 MINPP1Q9UNW1 487 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms