RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 EIF4A1P60842 406 aaKnown RBP12.72□□□□□ -0.37
COPA-201ENST00000241704 OLFM4Q6UX06 510 aa12.72□□□□□ -0.37
COPA-201ENST00000241704 IL17REQ8NFR9 667 aa12.72□□□□□ -0.37
COPA-201ENST00000241704 TMX3Q96JJ7 454 aa12.72□□□□□ -0.37
COPA-201ENST00000241704 HMG20BQ9P0W2 317 aa12.72□□□□□ -0.37
COPA-201ENST00000241704 TMEM94Q12767 1356 aa12.72□□□□□ -0.37
COPA-201ENST00000241704 CCP110O43303 1012 aa12.72□□□□□ -0.37
COPA-201ENST00000241704 SPATA32Q96LK8 384 aa12.72□□□□□ -0.37
COPA-201ENST00000241704 CLIP2Q9UDT6 1046 aa12.72□□□□□ -0.37
COPA-201ENST00000241704 MYO1BO43795 1136 aa12.72□□□□□ -0.37
COPA-201ENST00000241704 DDX11Q96FC9 970 aa12.72□□□□□ -0.37
COPA-201ENST00000241704 ZBTB22O15209 634 aa12.72□□□□□ -0.37
COPA-201ENST00000241704 UQCRFS1P1P0C7P4 283 aa12.72□□□□□ -0.37
COPA-201ENST00000241704 ANAPC15P60006 121 aa12.72□□□□□ -0.37
COPA-201ENST00000241704 ZNF444Q8N0Y2 327 aaPredicted RBP12.72□□□□□ -0.37
COPA-201ENST00000241704 OGFOD1Q8N543 542 aa12.71□□□□□ -0.37
COPA-201ENST00000241704 NYXQ9GZU5 481 aa12.71□□□□□ -0.37
COPA-201ENST00000241704 SYCP1Q15431 976 aa12.71□□□□□ -0.37
COPA-201ENST00000241704 TRAPPC3LQ5T215 181 aa12.71□□□□□ -0.37
COPA-201ENST00000241704 WASF1Q92558 559 aa12.71□□□□□ -0.37
COPA-201ENST00000241704 PTGS1P23219 599 aa12.71□□□□□ -0.38
COPA-201ENST00000241704 GIMAP6Q6P9H5 292 aa12.71□□□□□ -0.38
COPA-201ENST00000241704 BAG3O95817 575 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 BAG6P46379 1132 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 METTL22Q9BUU2 404 aaPredicted RBP12.7□□□□□ -0.38
COPA-201ENST00000241704 ACBD3Q9H3P7 528 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 SLU7O95391 586 aaKnown RBP12.7□□□□□ -0.38
COPA-201ENST00000241704 CD2BP2O95400 341 aaKnown RBP12.7□□□□□ -0.38
COPA-201ENST00000241704 C10orf67Q8IYJ2 551 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 PLBD2Q8NHP8 589 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 JDP2Q8WYK2 163 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.7□□□□□ -0.387e-6■□□□□ 9.2
COPA-201ENST00000241704 V9GYY5 206 aaPredicted RBP12.7□□□□□ -0.38
COPA-201ENST00000241704 IGSF1Q8N6C5 1336 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 ADGRB3O60242 1522 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 ZFYP08048 801 aaPredicted RBP12.7□□□□□ -0.38
COPA-201ENST00000241704 ZNF76P36508 570 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 CERS3Q8IU89 383 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 UTP14AQ9BVJ6 771 aaKnown RBP12.7□□□□□ -0.38
COPA-201ENST00000241704 KIF24Q5T7B8 1368 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 E9PCH4 1651 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 TERF2Q15554 542 aa12.7□□□□□ -0.38
COPA-201ENST00000241704 ZC3H12CQ9C0D7 883 aaKnown RBP12.7□□□□□ -0.38
COPA-201ENST00000241704 EPS15P42566 896 aa12.69□□□□□ -0.38
COPA-201ENST00000241704 SPTY2D1Q68D10 685 aaPredicted RBP12.69□□□□□ -0.38
COPA-201ENST00000241704 FERMT3Q86UX7 667 aa12.69□□□□□ -0.38
COPA-201ENST00000241704 ARHGEF25Q86VW2 580 aa12.69□□□□□ -0.38
COPA-201ENST00000241704 BICC1Q9H694 974 aaKnown RBP12.69□□□□□ -0.38
COPA-201ENST00000241704 RSPH14Q9UHP6 348 aa12.69□□□□□ -0.38
COPA-201ENST00000241704 RANBP6O60518 1105 aaKnown RBP12.69□□□□□ -0.38
COPA-201ENST00000241704 DHX8Q14562 1220 aaKnown RBP12.69□□□□□ -0.38
COPA-201ENST00000241704 CCDC191Q8NCU4 936 aa12.69□□□□□ -0.38
COPA-201ENST00000241704 ZNF710Q8N1W2 664 aa12.69□□□□□ -0.38
COPA-201ENST00000241704 FAM200AQ8TCP9 573 aa12.69□□□□□ -0.38
COPA-201ENST00000241704 ERO1AQ96HE7 468 aa12.69□□□□□ -0.38
COPA-201ENST00000241704 RNF41Q9H4P4 317 aaPredicted RBP12.69□□□□□ -0.38
COPA-201ENST00000241704 NSFL1CQ9UNZ2 370 aaKnown RBP12.69□□□□□ -0.38
COPA-201ENST00000241704 ABCC4O15439 1325 aa12.69□□□□□ -0.38
COPA-201ENST00000241704 IQCA1Q86XH1 822 aa12.69□□□□□ -0.38
COPA-201ENST00000241704 ZNF496Q96IT1 587 aaPredicted RBP12.69□□□□□ -0.38
COPA-201ENST00000241704 NEK1Q96PY6 1258 aa12.69□□□□□ -0.38
COPA-201ENST00000241704 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.69□□□□□ -0.38
COPA-201ENST00000241704 MADDQ8WXG6 1647 aa12.69□□□□□ -0.38
COPA-201ENST00000241704 USP8P40818 1118 aa12.68□□□□□ -0.38
COPA-201ENST00000241704 CCDC196A0A1B0GTZ2 297 aa12.68□□□□□ -0.38
COPA-201ENST00000241704 USP26Q9BXU7 913 aa12.68□□□□□ -0.38
COPA-201ENST00000241704 HDAC9Q9UKV0 1011 aa12.68□□□□□ -0.38
COPA-201ENST00000241704 DDIT3P35638 169 aa12.68□□□□□ -0.38
COPA-201ENST00000241704 PKP1Q13835 747 aa12.68□□□□□ -0.38
COPA-201ENST00000241704 EFCC1Q9HA90 598 aa12.68□□□□□ -0.38
COPA-201ENST00000241704 CLGNO14967 610 aa12.68□□□□□ -0.38
COPA-201ENST00000241704 CCDC96Q2M329 555 aa12.68□□□□□ -0.38
COPA-201ENST00000241704 KRI1Q8N9T8 703 aaKnown RBP12.68□□□□□ -0.38
COPA-201ENST00000241704 ZHX3Q9H4I2 956 aa12.68□□□□□ -0.38
COPA-201ENST00000241704 RTL1A6NKG5 1358 aa12.67□□□□□ -0.38
COPA-201ENST00000241704 INO80Q9ULG1 1556 aaPredicted RBP12.67□□□□□ -0.38
COPA-201ENST00000241704 APBA3O96018 575 aa12.67□□□□□ -0.38
COPA-201ENST00000241704 SCAND2PQ9GZW5 306 aaPredicted RBP12.67□□□□□ -0.38
COPA-201ENST00000241704 CABP5Q9NP86 173 aa12.67□□□□□ -0.38
COPA-201ENST00000241704 TRMT1Q9NXH9 659 aaKnown RBP12.67□□□□□ -0.38
COPA-201ENST00000241704 ALKQ9UM73 1620 aa12.67□□□□□ -0.38
COPA-201ENST00000241704 HLA-DOAP06340 250 aa12.67□□□□□ -0.38
COPA-201ENST00000241704 GRM1Q13255 1194 aa12.67□□□□□ -0.38
COPA-201ENST00000241704 KIAA1524Q8TCG1 905 aa12.67□□□□□ -0.38
COPA-201ENST00000241704 GTF3C6Q969F1 213 aa12.67□□□□□ -0.38
COPA-201ENST00000241704 DDX41Q9UJV9 622 aaKnown RBP12.67□□□□□ -0.38
COPA-201ENST00000241704 GLI2P10070 1586 aa12.67□□□□□ -0.38
COPA-201ENST00000241704 MCMDC2Q4G0Z9 681 aa12.67□□□□□ -0.38
COPA-201ENST00000241704 AXDND1Q5T1B0 1012 aaPredicted RBP12.67□□□□□ -0.38
COPA-201ENST00000241704 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
COPA-201ENST00000241704 GIGYF1O75420 1035 aaPredicted RBP12.66□□□□□ -0.38
COPA-201ENST00000241704 PHKG2P15735 406 aa12.66□□□□□ -0.38
COPA-201ENST00000241704 CAMK4Q16566 473 aa12.66□□□□□ -0.38
COPA-201ENST00000241704 CT47A1Q5JQC4 288 aaPredicted RBP12.66□□□□□ -0.38
COPA-201ENST00000241704 KRBA2Q6ZNG9 492 aa12.66□□□□□ -0.38
COPA-201ENST00000241704 CTCFLQ8NI51 663 aaPredicted RBP12.66□□□□□ -0.38
COPA-201ENST00000241704 SEC63Q9UGP8 760 aaKnown RBP12.66□□□□□ -0.38
COPA-201ENST00000241704 RBM8AQ9Y5S9 174 aaKnown RBP12.66□□□□□ -0.38
COPA-201ENST00000241704 NCOA3Q9Y6Q9 1424 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms