RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 SLU7O95391 586 aaKnown RBP7.66□□□□□ -1.18
CSMD2-201ENST00000241312 SLC26A6Q9BXS9 759 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 ASIC1P78348 528 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 IFT74Q96LB3 600 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 PANK2Q9BZ23 570 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 HLA-DOAP06340 250 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 KAT14Q9H8E8 782 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 SWAP70Q9UH65 585 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 MRPS9P82933 396 aaKnown RBP7.66□□□□□ -1.18
CSMD2-201ENST00000241312 MAP7D1Q3KQU3 841 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 IRX3P78415 501 aaPredicted RBP7.66□□□□□ -1.18
CSMD2-201ENST00000241312 IMPG2Q9BZV3 1241 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 RTL9Q8NET4 1388 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 ZFYP08048 801 aaPredicted RBP7.66□□□□□ -1.18
CSMD2-201ENST00000241312 MSANTD4Q8NCY6 345 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 CDC5LQ99459 802 aaKnown RBP7.66□□□□□ -1.18
CSMD2-201ENST00000241312 PAIP2Q9BPZ3 127 aaKnown RBP7.66□□□□□ -1.18
CSMD2-201ENST00000241312 MTRF1LQ9UGC7 380 aaKnown RBP7.66□□□□□ -1.18
CSMD2-201ENST00000241312 NBPF7P0C2Y1 421 aaPredicted RBP7.66□□□□□ -1.18
CSMD2-201ENST00000241312 SERPINA10Q9UK55 444 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 MAGI1Q96QZ7 1491 aaPredicted RBP7.66□□□□□ -1.18
CSMD2-201ENST00000241312 MAP3K1Q13233 1512 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 GSTO1P78417 241 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 B4GALNT4Q76KP1 1039 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 CNGA4Q8IV77 575 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 CCDC144CPQ8IYA2 1237 aa7.66□□□□□ -1.18
CSMD2-201ENST00000241312 NUCB1Q02818 461 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 MKRN1Q9UHC7 482 aaKnown RBP7.65□□□□□ -1.18
CSMD2-201ENST00000241312 CNPY2Q9Y2B0 182 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 ZKSCAN5Q9Y2L8 839 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 ATP5DP30049 168 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 LACTBP83111 547 aaPredicted RBP7.65□□□□□ -1.18
CSMD2-201ENST00000241312 CEP128Q6ZU80 1094 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 ARFGAP2Q8N6H7 521 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 NEK1Q96PY6 1258 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 TNNC1P63316 161 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 CPSF2Q9P2I0 782 aaKnown RBP7.65□□□□□ -1.18
CSMD2-201ENST00000241312 NESP48681 1621 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 HMGXB3Q12766 1538 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 NPHP3Q7Z494 1330 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 KIF5AQ12840 1032 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 GBP6Q6ZN66 633 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 HDXQ7Z353 690 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 CIB2O75838 187 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 HDAC1Q13547 482 aaPredicted RBP7.65□□□□□ -1.18
CSMD2-201ENST00000241312 ANKLE2Q86XL3 938 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 MYD88Q99836 296 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 FAM184BQ9ULE4 1060 aa7.65□□□□□ -1.18
CSMD2-201ENST00000241312 NBPF11Q86T75 865 aa7.65□□□□□ -1.19
CSMD2-201ENST00000241312 PPM1FP49593 454 aaPredicted RBP7.65□□□□□ -1.19
CSMD2-201ENST00000241312 TRAF1Q13077 416 aa7.65□□□□□ -1.19
CSMD2-201ENST00000241312 HSP90AA4PQ58FG1 418 aa7.65□□□□□ -1.19
CSMD2-201ENST00000241312 GSTA5Q7RTV2 222 aa7.65□□□□□ -1.19
CSMD2-201ENST00000241312 CCDC114Q96M63 670 aa7.65□□□□□ -1.19
CSMD2-201ENST00000241312 TYRO3Q06418 890 aa7.65□□□□□ -1.19
CSMD2-201ENST00000241312 CFAP58Q5T655 872 aa7.65□□□□□ -1.19
CSMD2-201ENST00000241312 ZNF526Q8TF50 670 aaPredicted RBP7.65□□□□□ -1.19
CSMD2-201ENST00000241312 CRNKL1Q9BZJ0 848 aaKnown RBP7.65□□□□□ -1.19
CSMD2-201ENST00000241312 ANKRD36BQ8N2N9 1353 aa7.65□□□□□ -1.19
CSMD2-201ENST00000241312 RTN1Q16799 776 aa7.65□□□□□ -1.19
CSMD2-201ENST00000241312 CPLX4Q7Z7G2 160 aa7.65□□□□□ -1.19
CSMD2-201ENST00000241312 ARL1P40616 181 aaPredicted RBP7.64□□□□□ -1.19
CSMD2-201ENST00000241312 WTAPQ15007 396 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 GIMAP6Q6P9H5 292 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 TMTC2Q8N394 836 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 OTUD6BQ8N6M0 293 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 ANKRD24Q8TF21 1146 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 PSMD1Q99460 953 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 AK9Q5TCS8 1911 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 A6NNZ2 444 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 TUBB8Q3ZCM7 444 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 CWC25Q9NXE8 425 aaPredicted RBP7.64□□□□□ -1.19
CSMD2-201ENST00000241312 TRMT112Q9UI30 125 aaKnown RBP7.64□□□□□ -1.19
CSMD2-201ENST00000241312 PRXQ9BXM0 1461 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 IGSF3O75054 1194 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 STMN2Q93045 179 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 CCDC42Q96M95 316 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 PHF23Q9BUL5 403 aaPredicted RBP7.64□□□□□ -1.19
CSMD2-201ENST00000241312 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.64□□□□□ -1.19
CSMD2-201ENST00000241312 UBE3BQ7Z3V4 1068 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 TSPY2A6NKD2 308 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 F6X3S4 739 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 APBB1IPQ7Z5R6 666 aaPredicted RBP7.64□□□□□ -1.19
CSMD2-201ENST00000241312 A0A1B0GUA9 196 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 LDHCP07864 332 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 ESR2Q92731 530 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 UTP14AQ9BVJ6 771 aaKnown RBP7.64□□□□□ -1.19
CSMD2-201ENST00000241312 TOPBP1Q92547 1522 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 PSMC4P43686 418 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 DNAJC21Q5F1R6 531 aaKnown RBP7.64□□□□□ -1.19
CSMD2-201ENST00000241312 POTEDQ86YR6 584 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 CAPZA3Q96KX2 299 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 GMNNO75496 209 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 XRCC6P12956 609 aaKnown RBP eCLIP7.64□□□□□ -1.19
CSMD2-201ENST00000241312 UBXN1Q04323 297 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 SELENOSQ9BQE4 189 aa7.64□□□□□ -1.19
CSMD2-201ENST00000241312 GNAQP50148 359 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 TSNAXIP1Q2TAA8 658 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 BRAPQ7Z569 592 aa7.63□□□□□ -1.19
CSMD2-201ENST00000241312 RPUSD2Q8IZ73 545 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms