RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 KIF6Q6ZMV9 814 aa11.03□□□□□ -0.64
IFT43-201ENST00000238628 CD99L2Q8TCZ2 262 aa11.03□□□□□ -0.64
IFT43-201ENST00000238628 PRDM6Q9NQX0 595 aa11.03□□□□□ -0.64
IFT43-201ENST00000238628 MAP3K15Q6ZN16 1313 aa11.03□□□□□ -0.64
IFT43-201ENST00000238628 WTIPA6NIX2 430 aaPredicted RBP11.02□□□□□ -0.65
IFT43-201ENST00000238628 MYL6BP14649 208 aa11.02□□□□□ -0.65
IFT43-201ENST00000238628 GPTP24298 496 aa11.02□□□□□ -0.65
IFT43-201ENST00000238628 PPP2R1AP30153 589 aa11.02□□□□□ -0.65
IFT43-201ENST00000238628 SLC9C1Q4G0N8 1177 aa11.02□□□□□ -0.65
IFT43-201ENST00000238628 SUSD4Q5VX71 490 aa11.02□□□□□ -0.65
IFT43-201ENST00000238628 TTLL7Q6ZT98 887 aa11.02□□□□□ -0.65
IFT43-201ENST00000238628 SP8Q8IXZ3 490 aa11.02□□□□□ -0.65
IFT43-201ENST00000238628 PNISRQ8TF01 805 aaKnown RBP11.02□□□□□ -0.65
IFT43-201ENST00000238628 NLRP3Q96P20 1036 aa11.02□□□□□ -0.65
IFT43-201ENST00000238628 PRO3102Q9H379 93 aa11.02□□□□□ -0.65
IFT43-201ENST00000238628 DBNDD1Q9H9R9 158 aa11.02□□□□□ -0.65
IFT43-201ENST00000238628 STXBP5LQ9Y2K9 1186 aa11.02□□□□□ -0.65
IFT43-201ENST00000238628 LAMB4A4D0S4 1761 aa11.01□□□□□ -0.65
IFT43-201ENST00000238628 A0A1W2PPC1 479 aa11.01□□□□□ -0.65
IFT43-201ENST00000238628 BBOX1O75936 387 aa11.01□□□□□ -0.65
IFT43-201ENST00000238628 NEFMP07197 916 aa11.01□□□□□ -0.65
IFT43-201ENST00000238628 SCARF1Q14162 830 aa11.01□□□□□ -0.65
IFT43-201ENST00000238628 C3orf67Q6ZVT6 689 aa11.01□□□□□ -0.65
IFT43-201ENST00000238628 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.01□□□□□ -0.65
IFT43-201ENST00000238628 ZNF34Q8IZ26 560 aa11.01□□□□□ -0.65
IFT43-201ENST00000238628 DEFB123Q8N688 67 aa11.01□□□□□ -0.65
IFT43-201ENST00000238628 ZBTB3Q9H5J0 574 aa11.01□□□□□ -0.65
IFT43-201ENST00000238628 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
IFT43-201ENST00000238628 WASHC4Q2M389 1173 aa11□□□□□ -0.65
IFT43-201ENST00000238628 PRAMEF18Q5VWM3 479 aa11□□□□□ -0.65
IFT43-201ENST00000238628 PPP1R42Q7Z4L9 355 aa11□□□□□ -0.65
IFT43-201ENST00000238628 SCAF8Q9UPN6 1271 aaKnown RBP11□□□□□ -0.65
IFT43-201ENST00000238628 NR2E3Q9Y5X4 410 aa11□□□□□ -0.65
IFT43-201ENST00000238628 ABCC4O15439 1325 aa11□□□□□ -0.65
IFT43-201ENST00000238628 UBN2Q6ZU65 1347 aa11□□□□□ -0.65
IFT43-201ENST00000238628 RIMBP2O15034 1052 aa10.99□□□□□ -0.65
IFT43-201ENST00000238628 NF2P35240 595 aa10.99□□□□□ -0.65
IFT43-201ENST00000238628 INHBEP58166 350 aa10.99□□□□□ -0.65
IFT43-201ENST00000238628 EIF4A1P60842 406 aaKnown RBP10.99□□□□□ -0.65
IFT43-201ENST00000238628 GIGYF2Q6Y7W6 1299 aaKnown RBP10.99□□□□□ -0.65
IFT43-201ENST00000238628 IFNL1Q8IU54 200 aa10.99□□□□□ -0.65
IFT43-201ENST00000238628 CNKSR2Q8WXI2 1034 aa10.99□□□□□ -0.65
IFT43-201ENST00000238628 HTATIP2Q9BUP3 242 aa10.99□□□□□ -0.65
IFT43-201ENST00000238628 KCNQ5Q9NR82 932 aa10.99□□□□□ -0.65
IFT43-201ENST00000238628 IBTKQ9P2D0 1353 aaPredicted RBP10.99□□□□□ -0.65
IFT43-201ENST00000238628 MANSC4A6NHS7 340 aaPredicted RBP10.98□□□□□ -0.65
IFT43-201ENST00000238628 NTSR2O95665 410 aa10.98□□□□□ -0.65
IFT43-201ENST00000238628 COL9A1P20849 921 aa10.98□□□□□ -0.65
IFT43-201ENST00000238628 SP3Q02447 781 aa10.98□□□□□ -0.65
IFT43-201ENST00000238628 PTPN12Q05209 780 aaKnown RBP10.98□□□□□ -0.65
IFT43-201ENST00000238628 SPRYD7Q5W111 196 aa10.98□□□□□ -0.65
IFT43-201ENST00000238628 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.98□□□□□ -0.65
IFT43-201ENST00000238628 PTCH2Q9Y6C5 1203 aa10.98□□□□□ -0.65
IFT43-201ENST00000238628 ZNF609O15014 1411 aa10.98□□□□□ -0.65
IFT43-201ENST00000238628 KDM3BQ7LBC6 1761 aa10.98□□□□□ -0.65
IFT43-201ENST00000238628 HTTP42858 3142 aa10.98□□□□□ -0.65
IFT43-201ENST00000238628 RANBP2P49792 3224 aaKnown RBP10.97□□□□□ -0.65
IFT43-201ENST00000238628 ECE2O60344 883 aa10.97□□□□□ -0.65
IFT43-201ENST00000238628 PRKG1Q13976 671 aa10.97□□□□□ -0.65
IFT43-201ENST00000238628 ARHGEF6Q15052 776 aa10.97□□□□□ -0.65
IFT43-201ENST00000238628 DOK7Q18PE1 504 aa10.97□□□□□ -0.65
IFT43-201ENST00000238628 PARP10Q53GL7 1025 aa10.97□□□□□ -0.65
IFT43-201ENST00000238628 SLC10A5Q5PT55 438 aa10.97□□□□□ -0.65
IFT43-201ENST00000238628 Q7L0L9 218 aa10.97□□□□□ -0.65
IFT43-201ENST00000238628 ARMC9Q7Z3E5 817 aa10.97□□□□□ -0.65
IFT43-201ENST00000238628 UTP14AQ9BVJ6 771 aaKnown RBP10.97□□□□□ -0.65
IFT43-201ENST00000238628 CENPFP49454 3210 aa10.97□□□□□ -0.65
IFT43-201ENST00000238628 OTUD7BQ6GQQ9 843 aa10.96□□□□□ -0.65
IFT43-201ENST00000238628 GPR153Q6NV75 609 aa10.96□□□□□ -0.65
IFT43-201ENST00000238628 THUMPD2Q9BTF0 503 aaKnown RBP10.96□□□□□ -0.65
IFT43-201ENST00000238628 BRCA2P51587 3418 aa10.96□□□□□ -0.66
IFT43-201ENST00000238628 RTL9Q8NET4 1388 aa10.95□□□□□ -0.66
IFT43-201ENST00000238628 ERBB4Q15303 1308 aa10.95□□□□□ -0.66
IFT43-201ENST00000238628 C6orf229H3BNL8 230 aa10.95□□□□□ -0.66
IFT43-201ENST00000238628 IGF2BP3O00425 579 aaKnown RBP eCLIP10.95□□□□□ -0.66
IFT43-201ENST00000238628 ZBTB7BO15156 539 aaPredicted RBP10.95□□□□□ -0.66
IFT43-201ENST00000238628 VIL1P09327 827 aaKnown RBP10.95□□□□□ -0.66
IFT43-201ENST00000238628 EIF2S2P20042 333 aaKnown RBP10.95□□□□□ -0.66
IFT43-201ENST00000238628 CRHR2Q13324 411 aa10.95□□□□□ -0.66
IFT43-201ENST00000238628 DDX46Q7L014 1031 aaKnown RBP10.95□□□□□ -0.66
IFT43-201ENST00000238628 SH3TC2Q8TF17 1288 aa10.95□□□□□ -0.66
IFT43-201ENST00000238628 MTMR10Q9NXD2 777 aa10.95□□□□□ -0.66
IFT43-201ENST00000238628 STAP2Q9UGK3 403 aa10.95□□□□□ -0.66
IFT43-201ENST00000238628 NSFL1CQ9UNZ2 370 aaKnown RBP10.95□□□□□ -0.66
IFT43-201ENST00000238628 G3V3G9 751 aa10.94□□□□□ -0.66
IFT43-201ENST00000238628 ZNF280AP59817 542 aaPredicted RBP10.94□□□□□ -0.66
IFT43-201ENST00000238628 CAP1Q01518 475 aa10.94□□□□□ -0.66
IFT43-201ENST00000238628 GRAPQ13588 217 aa10.94□□□□□ -0.66
IFT43-201ENST00000238628 NFE2L2Q16236 605 aa10.94□□□□□ -0.66
IFT43-201ENST00000238628 DCAF8Q5TAQ9 597 aa10.94□□□□□ -0.66
IFT43-201ENST00000238628 GRAPLQ8TC17 118 aaPredicted RBP10.94□□□□□ -0.66
IFT43-201ENST00000238628 SLC10A4Q96EP9 437 aa10.94□□□□□ -0.66
IFT43-201ENST00000238628 PLEKHF1Q96S99 279 aa10.94□□□□□ -0.66
IFT43-201ENST00000238628 PNNQ9H307 717 aaKnown RBP10.94□□□□□ -0.66
IFT43-201ENST00000238628 TAF1P21675 1872 aa10.93□□□□□ -0.66
IFT43-201ENST00000238628 LAMB2P55268 1798 aa10.93□□□□□ -0.66
IFT43-201ENST00000238628 ANKRD36CQ5JPF3 1778 aa10.93□□□□□ -0.66
IFT43-201ENST00000238628 HCLS1P14317 486 aaPredicted RBP10.93□□□□□ -0.66
IFT43-201ENST00000238628 HSP90AB3PQ58FF7 597 aa10.93□□□□□ -0.66
IFT43-201ENST00000238628 EYA3Q99504 573 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms