RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 DIAPH3Q9NSV4 1193 aa18.47■□□□□ 0.55
HDHD3-201ENST00000238379 CARMIL3Q8ND23 1372 aa18.47■□□□□ 0.55
HDHD3-201ENST00000238379 SLC4A3P48751 1232 aa18.46■□□□□ 0.55
HDHD3-201ENST00000238379 CWC27Q6UX04 472 aaKnown RBP18.46■□□□□ 0.55
HDHD3-201ENST00000238379 IGHMBP2P38935 993 aaKnown RBP18.46■□□□□ 0.55
HDHD3-201ENST00000238379 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.46■□□□□ 0.55
HDHD3-201ENST00000238379 AKT1S1Q96B36 256 aa18.46■□□□□ 0.55
HDHD3-201ENST00000238379 CDC5LQ99459 802 aaKnown RBP18.46■□□□□ 0.55
HDHD3-201ENST00000238379 NDUFB9Q9Y6M9 179 aa18.46■□□□□ 0.55
HDHD3-201ENST00000238379 TNS1Q9HBL0 1735 aaKnown RBP18.46■□□□□ 0.54
HDHD3-201ENST00000238379 COL4A1P02462 1669 aa18.45■□□□□ 0.54
HDHD3-201ENST00000238379 HIP1O00291 1037 aa18.45■□□□□ 0.54
HDHD3-201ENST00000238379 EPB41L2O43491 1005 aaKnown RBP18.45■□□□□ 0.54
HDHD3-201ENST00000238379 ZNF827Q17R98 1081 aa18.45■□□□□ 0.54
HDHD3-201ENST00000238379 NLRP3Q96P20 1036 aa18.45■□□□□ 0.54
HDHD3-201ENST00000238379 FSD1Q9BTV5 496 aa18.45■□□□□ 0.54
HDHD3-201ENST00000238379 ANO2Q9NQ90 1003 aa18.45■□□□□ 0.54
HDHD3-201ENST00000238379 FGFR2P21802 821 aa18.44■□□□□ 0.54
HDHD3-201ENST00000238379 BECN1Q14457 450 aa18.44■□□□□ 0.54
HDHD3-201ENST00000238379 CCDC158Q5M9N0 1113 aa18.44■□□□□ 0.54
HDHD3-201ENST00000238379 CCDC24Q8N4L8 307 aa18.44■□□□□ 0.54
HDHD3-201ENST00000238379 HELBQ8NG08 1087 aaPredicted RBP18.44■□□□□ 0.54
HDHD3-201ENST00000238379 RUFY2Q8WXA3 655 aa18.44■□□□□ 0.54
HDHD3-201ENST00000238379 DNAJC2Q99543 621 aaKnown RBP18.44■□□□□ 0.54
HDHD3-201ENST00000238379 TM4SF1P30408 202 aa18.44■□□□□ 0.54
HDHD3-201ENST00000238379 GORABQ5T7V8 394 aa18.44■□□□□ 0.54
HDHD3-201ENST00000238379 TBC1D2Q9BYX2 928 aa18.44■□□□□ 0.54
HDHD3-201ENST00000238379 CASZ1Q86V15 1759 aa18.43■□□□□ 0.54
HDHD3-201ENST00000238379 IFIT1P09914 478 aaKnown RBP18.43■□□□□ 0.54
HDHD3-201ENST00000238379 PUM3Q15397 648 aaKnown RBP18.43■□□□□ 0.54
HDHD3-201ENST00000238379 TFCP2L1Q9NZI6 479 aa18.43■□□□□ 0.54
HDHD3-201ENST00000238379 DAXXQ9UER7 740 aaPredicted RBP18.43■□□□□ 0.54
HDHD3-201ENST00000238379 RFX7Q2KHR2 1363 aa18.42■□□□□ 0.54
HDHD3-201ENST00000238379 NMIQ13287 307 aaPredicted RBP18.42■□□□□ 0.54
HDHD3-201ENST00000238379 TTC39AQ5SRH9 613 aa18.42■□□□□ 0.54
HDHD3-201ENST00000238379 ANKRD18AQ8IVF6 992 aa18.42■□□□□ 0.54
HDHD3-201ENST00000238379 KBTBD3Q8NAB2 608 aa18.42■□□□□ 0.54
HDHD3-201ENST00000238379 LPIN2Q92539 896 aa18.42■□□□□ 0.54
HDHD3-201ENST00000238379 FAM227BQ96M60 508 aa18.42■□□□□ 0.54
HDHD3-201ENST00000238379 PAG1Q9NWQ8 432 aa18.42■□□□□ 0.54
HDHD3-201ENST00000238379 DDX46Q7L014 1031 aaKnown RBP18.42■□□□□ 0.54
HDHD3-201ENST00000238379 CNBD1Q8NA66 436 aa18.42■□□□□ 0.54
HDHD3-201ENST00000238379 ZNF512BQ96KM6 892 aaPredicted RBP18.42■□□□□ 0.54
HDHD3-201ENST00000238379 LSG1Q9H089 658 aaKnown RBP18.42■□□□□ 0.54
HDHD3-201ENST00000238379 SNRKQ9NRH2 765 aa18.42■□□□□ 0.54
HDHD3-201ENST00000238379 BSDC1Q9NW68 430 aaPredicted RBP18.42■□□□□ 0.54
HDHD3-201ENST00000238379 RGPD3A6NKT7 1758 aaPredicted RBP18.41■□□□□ 0.54
HDHD3-201ENST00000238379 RGPD4Q7Z3J3 1758 aa18.41■□□□□ 0.54
HDHD3-201ENST00000238379 GOLIM4O00461 696 aa18.41■□□□□ 0.54
HDHD3-201ENST00000238379 TAF5LO75529 589 aa18.41■□□□□ 0.54
HDHD3-201ENST00000238379 PRR5LQ6MZQ0 368 aa18.41■□□□□ 0.54
HDHD3-201ENST00000238379 SPEF2Q9C093 1822 aa18.41■□□□□ 0.54
HDHD3-201ENST00000238379 NPHP1O15259 732 aa18.4■□□□□ 0.54
HDHD3-201ENST00000238379 CHRNDQ07001 517 aa18.4■□□□□ 0.54
HDHD3-201ENST00000238379 SCARF1Q14162 830 aa18.4■□□□□ 0.54
HDHD3-201ENST00000238379 TICAM2Q86XR7 235 aa18.4■□□□□ 0.54
HDHD3-201ENST00000238379 COL23A1Q86Y22 540 aaPredicted RBP18.4■□□□□ 0.54
HDHD3-201ENST00000238379 CELF1Q92879 486 aaKnown RBP18.4■□□□□ 0.54
HDHD3-201ENST00000238379 SNX21Q969T3 373 aa18.4■□□□□ 0.54
HDHD3-201ENST00000238379 RAD50Q92878 1312 aa18.4■□□□□ 0.54
HDHD3-201ENST00000238379 A0A0D9SFI3 127 aa18.39■□□□□ 0.54
HDHD3-201ENST00000238379 SERPINB2P05120 415 aa18.39■□□□□ 0.54
HDHD3-201ENST00000238379 KIAA1211Q6ZU35 1233 aa18.39■□□□□ 0.54
HDHD3-201ENST00000238379 TAF1P21675 1872 aa18.39■□□□□ 0.54
HDHD3-201ENST00000238379 TNRC6CQ9HCJ0 1690 aaKnown RBP18.39■□□□□ 0.53
HDHD3-201ENST00000238379 SNAP23O00161 211 aa18.39■□□□□ 0.53
HDHD3-201ENST00000238379 RPS8P62241 208 aaKnown RBP18.39■□□□□ 0.53
HDHD3-201ENST00000238379 RABEP1Q15276 862 aa18.39■□□□□ 0.53
HDHD3-201ENST00000238379 ARAP2Q8WZ64 1704 aa18.38■□□□□ 0.53
HDHD3-201ENST00000238379 SLC5A1P13866 664 aa18.38■□□□□ 0.53
HDHD3-201ENST00000238379 MCCP23508 829 aa18.38■□□□□ 0.53
HDHD3-201ENST00000238379 HSPA4P34932 840 aa18.38■□□□□ 0.53
HDHD3-201ENST00000238379 DDR1Q08345 913 aa18.38■□□□□ 0.53
HDHD3-201ENST00000238379 CCDC102BQ68D86 513 aa18.38■□□□□ 0.53
HDHD3-201ENST00000238379 FLAD1Q8NFF5 587 aa18.38■□□□□ 0.53
HDHD3-201ENST00000238379 ANTXR1Q9H6X2 564 aa18.38■□□□□ 0.53
HDHD3-201ENST00000238379 MINPP1Q9UNW1 487 aa18.38■□□□□ 0.53
HDHD3-201ENST00000238379 MED23Q9ULK4 1368 aa18.38■□□□□ 0.53
HDHD3-201ENST00000238379 PHKA1P46020 1223 aa18.37■□□□□ 0.53
HDHD3-201ENST00000238379 ANAPC15P60006 121 aa18.37■□□□□ 0.53
HDHD3-201ENST00000238379 FKBP4Q02790 459 aaKnown RBP eCLIP18.37■□□□□ 0.53
HDHD3-201ENST00000238379 IL17RAQ96F46 866 aa18.37■□□□□ 0.53
HDHD3-201ENST00000238379 PALD1Q9ULE6 856 aa18.37■□□□□ 0.53
HDHD3-201ENST00000238379 POLRMTO00411 1230 aaKnown RBP18.37■□□□□ 0.53
HDHD3-201ENST00000238379 CHGBP05060 677 aa18.37■□□□□ 0.53
HDHD3-201ENST00000238379 ARID4AP29374 1257 aaPredicted RBP18.37■□□□□ 0.53
HDHD3-201ENST00000238379 MCAMP43121 646 aa18.37■□□□□ 0.53
HDHD3-201ENST00000238379 ZAP70P43403 619 aa18.37■□□□□ 0.53
HDHD3-201ENST00000238379 PTH1RQ03431 593 aa18.37■□□□□ 0.53
HDHD3-201ENST00000238379 CAMKK2Q96RR4 588 aa18.37■□□□□ 0.53
HDHD3-201ENST00000238379 CD2BP2O95400 341 aaKnown RBP18.36■□□□□ 0.53
HDHD3-201ENST00000238379 PI16Q6UXB8 463 aa18.36■□□□□ 0.53
HDHD3-201ENST00000238379 NLGN1Q8N2Q7 840 aa18.36■□□□□ 0.53
HDHD3-201ENST00000238379 AKAP11Q9UKA4 1901 aa18.36■□□□□ 0.53
HDHD3-201ENST00000238379 UQCRFS1P1P0C7P4 283 aa18.35■□□□□ 0.53
HDHD3-201ENST00000238379 CCDC171Q6TFL3 1326 aa18.35■□□□□ 0.53
HDHD3-201ENST00000238379 PNPLA7Q6ZV29 1317 aa18.35■□□□□ 0.53
HDHD3-201ENST00000238379 ST5P78524 1137 aa18.35■□□□□ 0.53
HDHD3-201ENST00000238379 EN1Q05925 392 aaPredicted RBP18.35■□□□□ 0.53
HDHD3-201ENST00000238379 EZH2Q15910 746 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms