RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 ATP2B3Q16720 1220 aa28.84■■■□□ 2.21
RRP9-201ENST00000232888 CARMIL3Q8ND23 1372 aa28.83■■■□□ 2.21
RRP9-201ENST00000232888 MCCP23508 829 aa28.83■■■□□ 2.21
RRP9-201ENST00000232888 KIF2CQ99661 725 aa28.83■■■□□ 2.21
RRP9-201ENST00000232888 RAD50Q92878 1312 aa28.82■■■□□ 2.2
RRP9-201ENST00000232888 XAGE2Q96GT9 111 aa28.82■■■□□ 2.2
RRP9-201ENST00000232888 FSD1Q9BTV5 496 aa28.82■■■□□ 2.2
RRP9-201ENST00000232888 GORABQ5T7V8 394 aa28.81■■■□□ 2.2
RRP9-201ENST00000232888 ERICH6Q7L0X2 663 aa28.81■■■□□ 2.2
RRP9-201ENST00000232888 SNX21Q969T3 373 aa28.81■■■□□ 2.2
RRP9-201ENST00000232888 NLRP3Q96P20 1036 aa28.81■■■□□ 2.2
RRP9-201ENST00000232888 ANO2Q9NQ90 1003 aa28.81■■■□□ 2.2
RRP9-201ENST00000232888 POTEAQ6S8J7 498 aa28.8■■■□□ 2.2
RRP9-201ENST00000232888 IL27Q8NEV9 243 aa28.8■■■□□ 2.2
RRP9-201ENST00000232888 SEC31BQ9NQW1 1179 aa28.8■■■□□ 2.2
RRP9-201ENST00000232888 RABEP1Q15276 862 aa28.79■■■□□ 2.2
RRP9-201ENST00000232888 PUM3Q15397 648 aaKnown RBP28.79■■■□□ 2.2
RRP9-201ENST00000232888 KIAA1211Q6ZU35 1233 aa28.79■■■□□ 2.2
RRP9-201ENST00000232888 ZNF512BQ96KM6 892 aaPredicted RBP28.79■■■□□ 2.2
RRP9-201ENST00000232888 SNRKQ9NRH2 765 aa28.79■■■□□ 2.2
RRP9-201ENST00000232888 ANAPC15P60006 121 aa28.79■■■□□ 2.2
RRP9-201ENST00000232888 NFIXQ14938 502 aa28.79■■■□□ 2.2
RRP9-201ENST00000232888 CWC27Q6UX04 472 aaKnown RBP28.79■■■□□ 2.2
RRP9-201ENST00000232888 LPIN2Q92539 896 aa28.79■■■□□ 2.2
RRP9-201ENST00000232888 IFIT1P09914 478 aaKnown RBP28.78■■■□□ 2.2
RRP9-201ENST00000232888 TTC39AQ5SRH9 613 aa28.78■■■□□ 2.2
RRP9-201ENST00000232888 GYS1P13807 737 aa28.77■■■□□ 2.2
RRP9-201ENST00000232888 ANKRD18AQ8IVF6 992 aa28.77■■■□□ 2.2
RRP9-201ENST00000232888 FLAD1Q8NFF5 587 aa28.77■■■□□ 2.2
RRP9-201ENST00000232888 IL17RAQ96F46 866 aa28.77■■■□□ 2.2
RRP9-201ENST00000232888 SPEF2Q9C093 1822 aa28.77■■■□□ 2.2
RRP9-201ENST00000232888 FGFR2P21802 821 aa28.76■■■□□ 2.19
RRP9-201ENST00000232888 KBTBD3Q8NAB2 608 aa28.76■■■□□ 2.19
RRP9-201ENST00000232888 DNAJC2Q99543 621 aaKnown RBP28.76■■■□□ 2.19
RRP9-201ENST00000232888 TBC1D2Q9BYX2 928 aa28.76■■■□□ 2.19
RRP9-201ENST00000232888 RGPD3A6NKT7 1758 aaPredicted RBP28.76■■■□□ 2.19
RRP9-201ENST00000232888 RGPD4Q7Z3J3 1758 aa28.76■■■□□ 2.19
RRP9-201ENST00000232888 PAG1Q9NWQ8 432 aa28.75■■■□□ 2.19
RRP9-201ENST00000232888 ADORA1P30542 326 aa28.75■■■□□ 2.19
RRP9-201ENST00000232888 LRRFIP1Q32MZ4 808 aaKnown RBP28.75■■■□□ 2.19
RRP9-201ENST00000232888 AKT1S1Q96B36 256 aa28.75■■■□□ 2.19
RRP9-201ENST00000232888 BSDC1Q9NW68 430 aaPredicted RBP28.75■■■□□ 2.19
RRP9-201ENST00000232888 SLC5A1P13866 664 aa28.74■■■□□ 2.19
RRP9-201ENST00000232888 HSCBQ8IWL3 235 aa28.74■■■□□ 2.19
RRP9-201ENST00000232888 LSG1Q9H089 658 aaKnown RBP28.74■■■□□ 2.19
RRP9-201ENST00000232888 TM4SF1P30408 202 aa28.73■■■□□ 2.19
RRP9-201ENST00000232888 C3orf67Q6ZVT6 689 aa28.73■■■□□ 2.19
RRP9-201ENST00000232888 CNBD1Q8NA66 436 aa28.73■■■□□ 2.19
RRP9-201ENST00000232888 IL25Q9H293 177 aa28.73■■■□□ 2.19
RRP9-201ENST00000232888 NPHP1O15259 732 aa28.72■■■□□ 2.19
RRP9-201ENST00000232888 UQCRFS1P1P0C7P4 283 aa28.72■■■□□ 2.19
RRP9-201ENST00000232888 NMIQ13287 307 aaPredicted RBP28.72■■■□□ 2.19
RRP9-201ENST00000232888 HSPA4P34932 840 aa28.71■■■□□ 2.19
RRP9-201ENST00000232888 TFCP2L1Q9NZI6 479 aa28.71■■■□□ 2.19
RRP9-201ENST00000232888 SLC4A3P48751 1232 aa28.71■■■□□ 2.19
RRP9-201ENST00000232888 TNS1Q9HBL0 1735 aaKnown RBP28.7■■■□□ 2.19
RRP9-201ENST00000232888 GOLIM4O00461 696 aa28.7■■■□□ 2.18
RRP9-201ENST00000232888 EDC3Q96F86 508 aaKnown RBP28.7■■■□□ 2.18
RRP9-201ENST00000232888 RPS8P62241 208 aaKnown RBP28.69■■■□□ 2.18
RRP9-201ENST00000232888 CHRNDQ07001 517 aa28.69■■■□□ 2.18
RRP9-201ENST00000232888 DDX46Q7L014 1031 aaKnown RBP28.69■■■□□ 2.18
RRP9-201ENST00000232888 FAM227BQ96M60 508 aa28.69■■■□□ 2.18
RRP9-201ENST00000232888 ARAP2Q8WZ64 1704 aa28.68■■■□□ 2.18
RRP9-201ENST00000232888 MED23Q9ULK4 1368 aa28.68■■■□□ 2.18
RRP9-201ENST00000232888 ARID4AP29374 1257 aaPredicted RBP28.68■■■□□ 2.18
RRP9-201ENST00000232888 ST5P78524 1137 aa28.67■■■□□ 2.18
RRP9-201ENST00000232888 NLGN1Q8N2Q7 840 aa28.67■■■□□ 2.18
RRP9-201ENST00000232888 HELBQ8NG08 1087 aaPredicted RBP28.67■■■□□ 2.18
RRP9-201ENST00000232888 ZFYP08048 801 aaPredicted RBP28.67■■■□□ 2.18
RRP9-201ENST00000232888 UBE4AQ14139 1066 aa28.67■■■□□ 2.18
RRP9-201ENST00000232888 TTF1Q15361 905 aaPredicted RBP28.67■■■□□ 2.18
RRP9-201ENST00000232888 ZNF827Q17R98 1081 aa28.67■■■□□ 2.18
RRP9-201ENST00000232888 HELLSQ9NRZ9 838 aa28.67■■■□□ 2.18
RRP9-201ENST00000232888 CCDC171Q6TFL3 1326 aa28.66■■■□□ 2.18
RRP9-201ENST00000232888 A0A0D9SFI3 127 aa28.66■■■□□ 2.18
RRP9-201ENST00000232888 SERPINB2P05120 415 aa28.66■■■□□ 2.18
RRP9-201ENST00000232888 CCDC102BQ68D86 513 aa28.66■■■□□ 2.18
RRP9-201ENST00000232888 PRR5LQ6MZQ0 368 aa28.66■■■□□ 2.18
RRP9-201ENST00000232888 ST18O60284 1047 aa28.65■■■□□ 2.18
RRP9-201ENST00000232888 FKBP4Q02790 459 aaKnown RBP eCLIP28.65■■■□□ 2.18
RRP9-201ENST00000232888 MCMDC2Q4G0Z9 681 aa28.65■■■□□ 2.18
RRP9-201ENST00000232888 ANKRD2Q9GZV1 360 aa28.65■■■□□ 2.18
RRP9-201ENST00000232888 NDUFB9Q9Y6M9 179 aa28.65■■■□□ 2.18
RRP9-201ENST00000232888 TAF5LO75529 589 aa28.64■■■□□ 2.18
RRP9-201ENST00000232888 CELF1Q92879 486 aaKnown RBP28.64■■■□□ 2.18
RRP9-201ENST00000232888 MAP4K1Q92918 833 aa28.64■■■□□ 2.18
RRP9-201ENST00000232888 MINPP1Q9UNW1 487 aa28.64■■■□□ 2.18
RRP9-201ENST00000232888 CASZ1Q86V15 1759 aa28.64■■■□□ 2.18
RRP9-201ENST00000232888 RNF113AO15541 343 aaKnown RBP28.63■■■□□ 2.17
RRP9-201ENST00000232888 KCNB2Q92953 911 aa28.63■■■□□ 2.17
RRP9-201ENST00000232888 POLRMTO00411 1230 aaKnown RBP28.62■■■□□ 2.17
RRP9-201ENST00000232888 MCAMP43121 646 aa28.62■■■□□ 2.17
RRP9-201ENST00000232888 ZAP70P43403 619 aa28.62■■■□□ 2.17
RRP9-201ENST00000232888 ZMYM1Q5SVZ6 1142 aa28.62■■■□□ 2.17
RRP9-201ENST00000232888 COL23A1Q86Y22 540 aaPredicted RBP28.62■■■□□ 2.17
RRP9-201ENST00000232888 PHKA1P46020 1223 aa28.61■■■□□ 2.17
RRP9-201ENST00000232888 SCARF1Q14162 830 aa28.61■■■□□ 2.17
RRP9-201ENST00000232888 CRY2Q49AN0 593 aa28.61■■■□□ 2.17
RRP9-201ENST00000232888 ZSCAN25Q6NSZ9 544 aa28.61■■■□□ 2.17
RRP9-201ENST00000232888 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms