RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 SYNCQ9H7C4 482 aa13.18□□□□□ -0.3
LAMA4-201ENST00000230538 CYLC1P35663 651 aaPredicted RBP13.18□□□□□ -0.3
LAMA4-201ENST00000230538 NBPF6Q5VWK0 638 aa13.18□□□□□ -0.3
LAMA4-201ENST00000230538 NBPF5PQ86XG9 351 aaPredicted RBP13.18□□□□□ -0.3
LAMA4-201ENST00000230538 NBPF4Q96M43 638 aa13.18□□□□□ -0.3
LAMA4-201ENST00000230538 TMTC2Q8N394 836 aa13.18□□□□□ -0.3
LAMA4-201ENST00000230538 DDX12PQ92771 950 aa13.18□□□□□ -0.3
LAMA4-201ENST00000230538 MEIS3Q99687 375 aa13.18□□□□□ -0.3
LAMA4-201ENST00000230538 HSP90AA4PQ58FG1 418 aa13.18□□□□□ -0.3
LAMA4-201ENST00000230538 ESR2Q92731 530 aa13.18□□□□□ -0.3
LAMA4-201ENST00000230538 A0A1W2PRG0 241 aa13.18□□□□□ -0.3
LAMA4-201ENST00000230538 GRIPAP1Q4V328 841 aa13.18□□□□□ -0.3
LAMA4-201ENST00000230538 PLVAPQ9BX97 442 aa13.18□□□□□ -0.3
LAMA4-201ENST00000230538 C6orf163Q5TEZ5 329 aa13.17□□□□□ -0.3
LAMA4-201ENST00000230538 RALGAPBQ86X10 1494 aa13.17□□□□□ -0.3
LAMA4-201ENST00000230538 C16orf71Q8IYS4 520 aaPredicted RBP13.17□□□□□ -0.3
LAMA4-201ENST00000230538 SPAG5Q96R06 1193 aa13.17□□□□□ -0.3
LAMA4-201ENST00000230538 ACEP12821 1306 aa13.17□□□□□ -0.3
LAMA4-201ENST00000230538 Q6ZUG5 572 aa13.17□□□□□ -0.3
LAMA4-201ENST00000230538 ZGPATQ8N5A5 531 aaKnown RBP13.17□□□□□ -0.3
LAMA4-201ENST00000230538 RBM8AQ9Y5S9 174 aaKnown RBP13.17□□□□□ -0.3
LAMA4-201ENST00000230538 KRT13P13646 458 aa13.17□□□□□ -0.3
LAMA4-201ENST00000230538 MCMDC2Q4G0Z9 681 aa13.17□□□□□ -0.3
LAMA4-201ENST00000230538 ESYT1Q9BSJ8 1104 aa13.17□□□□□ -0.3
LAMA4-201ENST00000230538 PCDHB15Q9Y5E8 787 aa13.17□□□□□ -0.3
LAMA4-201ENST00000230538 IDI1Q13907 227 aa13.16□□□□□ -0.3
LAMA4-201ENST00000230538 USP37Q86T82 979 aa13.16□□□□□ -0.3
LAMA4-201ENST00000230538 TCEANC2Q96MN5 208 aa13.16□□□□□ -0.3
LAMA4-201ENST00000230538 SELENOOQ9BVL4 669 aa13.16□□□□□ -0.3
LAMA4-201ENST00000230538 MRPS27Q92552 414 aaKnown RBP13.16□□□□□ -0.3
LAMA4-201ENST00000230538 PRIMPOLQ96LW4 560 aa13.16□□□□□ -0.3
LAMA4-201ENST00000230538 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
LAMA4-201ENST00000230538 TTC12Q9H892 705 aaPredicted RBP13.16□□□□□ -0.3
LAMA4-201ENST00000230538 DYNC1I1O14576 645 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 PHACTR2O75167 634 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 C14orf93Q9H972 538 aaKnown RBP13.15□□□□□ -0.3
LAMA4-201ENST00000230538 RASAL2Q9UJF2 1139 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 ATP2B3Q16720 1220 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
LAMA4-201ENST00000230538 ZHX1Q9UKY1 873 aaPredicted RBP13.15□□□□□ -0.3
LAMA4-201ENST00000230538 RGS22Q8NE09 1264 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 SREK1Q8WXA9 508 aaKnown RBP13.15□□□□□ -0.3
LAMA4-201ENST00000230538 ARHGAP45Q92619 1136 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 THOC2Q8NI27 1593 aaKnown RBP13.15□□□□□ -0.3
LAMA4-201ENST00000230538 CTAGE15A4D2H0 777 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 CTAGE8P0CG41 777 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 CTAGE6Q86UF2 777 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 CTAGE4Q8IX94 777 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 SSX2IPQ9Y2D8 614 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 PDE1AP54750 535 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 CHRNA2Q15822 529 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 XAGE3Q8WTP9 111 aa13.15□□□□□ -0.3
LAMA4-201ENST00000230538 UTP14AQ9BVJ6 771 aaKnown RBP13.15□□□□□ -0.3
LAMA4-201ENST00000230538 GNAQP50148 359 aa13.14□□□□□ -0.31
LAMA4-201ENST00000230538 TRAF1Q13077 416 aa13.14□□□□□ -0.31
LAMA4-201ENST00000230538 AOPEPQ8N6M6 819 aa13.14□□□□□ -0.31
LAMA4-201ENST00000230538 MRVI1Q9Y6F6 885 aa13.14□□□□□ -0.31
LAMA4-201ENST00000230538 SKILP12757 684 aa13.14□□□□□ -0.31
LAMA4-201ENST00000230538 MARCKSP29966 332 aaPredicted RBP13.14□□□□□ -0.31
LAMA4-201ENST00000230538 NAPAP54920 295 aa13.14□□□□□ -0.31
LAMA4-201ENST00000230538 ASIC1P78348 528 aa13.14□□□□□ -0.31
LAMA4-201ENST00000230538 SPAG1Q07617 926 aa13.14□□□□□ -0.31
LAMA4-201ENST00000230538 PSMA7O14818 248 aa13.14□□□□□ -0.31
LAMA4-201ENST00000230538 CEBPAP49715 358 aaPredicted RBP13.14□□□□□ -0.31
LAMA4-201ENST00000230538 NAA16Q6N069 864 aaPredicted RBP13.14□□□□□ -0.31
LAMA4-201ENST00000230538 LRRC45Q96CN5 670 aa13.14□□□□□ -0.31
LAMA4-201ENST00000230538 F8W031 263 aaPredicted RBP13.14□□□□□ -0.31
LAMA4-201ENST00000230538 DNM1Q05193 864 aaKnown RBP13.14□□□□□ -0.31
LAMA4-201ENST00000230538 PICALMQ13492 652 aa13.14□□□□□ -0.31
LAMA4-201ENST00000230538 C8orf34Q49A92 452 aa13.14□□□□□ -0.31
LAMA4-201ENST00000230538 PAIP2Q9BPZ3 127 aaKnown RBP13.14□□□□□ -0.31
LAMA4-201ENST00000230538 IQSEC3Q9UPP2 1182 aaPredicted RBP13.14□□□□□ -0.31
LAMA4-201ENST00000230538 ATP2C2O75185 946 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 PRPHP41219 470 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 NMIQ13287 307 aaPredicted RBP13.13□□□□□ -0.31
LAMA4-201ENST00000230538 ZNF354CQ86Y25 554 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 DNAJC25Q9H1X3 360 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 DNAI1Q9UI46 699 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 PTGS1P23219 599 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 NOLC1Q14978 699 aaKnown RBP eCLIP13.13□□□□□ -0.31
LAMA4-201ENST00000230538 SETDB2Q96T68 719 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 IQCGQ9H095 443 aaKnown RBP13.13□□□□□ -0.31
LAMA4-201ENST00000230538 NSRP1Q9H0G5 558 aaKnown RBP13.13□□□□□ -0.31
LAMA4-201ENST00000230538 F13A1P00488 732 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 SMARCC2Q8TAQ2 1214 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 TNNQ9UQP3 1299 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 RTL1A6NKG5 1358 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 GRM8O00222 908 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 COPS6Q7L5N1 327 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 C8orf58Q8NAV2 365 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 DHX58Q96C10 678 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 SERPINA10Q9UK55 444 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 HDAC9Q9UKV0 1011 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 CALM1P0DP23 149 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 CALM2P0DP24 149 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 CALM3P0DP25 149 aa13.13□□□□□ -0.31
LAMA4-201ENST00000230538 GRIN2AQ12879 1464 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 MAGEB6P1A0A0J9YX57 407 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 TACC1O75410 805 aa13.12□□□□□ -0.31
LAMA4-201ENST00000230538 SLC9C2Q5TAH2 1124 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms