RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 TYRO3Q06418 890 aa17.56■□□□□ 0.4
UBE2D4-201ENST00000222402 ANO6Q4KMQ2 910 aa17.56■□□□□ 0.4
UBE2D4-201ENST00000222402 DHX32Q7L7V1 743 aaKnown RBP17.56■□□□□ 0.4
UBE2D4-201ENST00000222402 ARHGAP23Q9P227 1491 aa17.56■□□□□ 0.4
UBE2D4-201ENST00000222402 FAM200AQ8TCP9 573 aa17.56■□□□□ 0.4
UBE2D4-201ENST00000222402 EYA2O00167 538 aa17.55■□□□□ 0.4
UBE2D4-201ENST00000222402 GTF2E1P29083 439 aaPredicted RBP17.55■□□□□ 0.4
UBE2D4-201ENST00000222402 TTC6Q86TZ1 520 aa17.55■□□□□ 0.4
UBE2D4-201ENST00000222402 SLIT1O75093 1534 aa17.55■□□□□ 0.4
UBE2D4-201ENST00000222402 RRP12Q5JTH9 1297 aaKnown RBP17.55■□□□□ 0.4
UBE2D4-201ENST00000222402 IL2RBP14784 551 aa17.55■□□□□ 0.4
UBE2D4-201ENST00000222402 ZSCAN16Q9H4T2 348 aaPredicted RBP17.55■□□□□ 0.4
UBE2D4-201ENST00000222402 TMEM94Q12767 1356 aa17.55■□□□□ 0.4
UBE2D4-201ENST00000222402 FAM89AQ96GI7 184 aa17.55■□□□□ 0.4
UBE2D4-201ENST00000222402 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.55■□□□□ 0.4
UBE2D4-201ENST00000222402 GOLGA8BA8MQT2 603 aa17.54■□□□□ 0.4
UBE2D4-201ENST00000222402 LUZP1Q86V48 1076 aa17.54■□□□□ 0.4
UBE2D4-201ENST00000222402 NCOA5Q9HCD5 579 aaKnown RBP17.54■□□□□ 0.4
UBE2D4-201ENST00000222402 C8orf76Q96K31 380 aa17.54■□□□□ 0.4
UBE2D4-201ENST00000222402 TRMT112Q9UI30 125 aaKnown RBP17.54■□□□□ 0.4
UBE2D4-201ENST00000222402 PCDH11XQ9BZA7 1347 aa17.54■□□□□ 0.4
UBE2D4-201ENST00000222402 PCDH11YQ9BZA8 1340 aa17.54■□□□□ 0.4
UBE2D4-201ENST00000222402 SETD1AO15047 1707 aaKnown RBP17.54■□□□□ 0.4
UBE2D4-201ENST00000222402 PTPDC1A2A3K4 754 aa17.54■□□□□ 0.4
UBE2D4-201ENST00000222402 ZNF213O14771 459 aa17.54■□□□□ 0.4
UBE2D4-201ENST00000222402 LIG1P18858 919 aa17.54■□□□□ 0.4
UBE2D4-201ENST00000222402 RNF113AO15541 343 aaKnown RBP17.53■□□□□ 0.4
UBE2D4-201ENST00000222402 POLR3DP05423 398 aaPredicted RBP17.53■□□□□ 0.4
UBE2D4-201ENST00000222402 NOLC1Q14978 699 aaKnown RBP eCLIP17.53■□□□□ 0.4
UBE2D4-201ENST00000222402 FILIP1Q7Z7B0 1213 aa17.53■□□□□ 0.4
UBE2D4-201ENST00000222402 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
UBE2D4-201ENST00000222402 NAT10Q9H0A0 1025 aaKnown RBP17.53■□□□□ 0.4
UBE2D4-201ENST00000222402 DNAJC25Q9H1X3 360 aa17.53■□□□□ 0.4
UBE2D4-201ENST00000222402 FSIP1Q8NA03 581 aa17.53■□□□□ 0.4
UBE2D4-201ENST00000222402 USP42Q9H9J4 1324 aaKnown RBP17.53■□□□□ 0.4
UBE2D4-201ENST00000222402 LRRC24Q50LG9 513 aa17.53■□□□□ 0.4
UBE2D4-201ENST00000222402 C17orf53Q8N3J3 647 aaPredicted RBP17.53■□□□□ 0.4
UBE2D4-201ENST00000222402 LEO1Q8WVC0 666 aaPredicted RBP17.53■□□□□ 0.4
UBE2D4-201ENST00000222402 KAZALD1Q96I82 304 aa17.52■□□□□ 0.4
UBE2D4-201ENST00000222402 HAUS7Q99871 368 aa17.52■□□□□ 0.4
UBE2D4-201ENST00000222402 CCDC191Q8NCU4 936 aa17.52■□□□□ 0.4
UBE2D4-201ENST00000222402 CYP21A2P08686 494 aa17.52■□□□□ 0.39
UBE2D4-201ENST00000222402 TPD52L1Q16890 204 aaPredicted RBP17.52■□□□□ 0.39
UBE2D4-201ENST00000222402 ZSCAN25Q6NSZ9 544 aa17.52■□□□□ 0.39
UBE2D4-201ENST00000222402 GTF3C6Q969F1 213 aa17.51■□□□□ 0.39
UBE2D4-201ENST00000222402 MPHOSPH8Q99549 860 aa17.51■□□□□ 0.39
UBE2D4-201ENST00000222402 ORC3Q9UBD5 711 aaPredicted RBP17.51■□□□□ 0.39
UBE2D4-201ENST00000222402 RPAP1Q9BWH6 1393 aaPredicted RBP17.51■□□□□ 0.39
UBE2D4-201ENST00000222402 KLF18A0A0U1RQI7 1052 aa17.51■□□□□ 0.39
UBE2D4-201ENST00000222402 ATP2B1P20020 1258 aa17.51■□□□□ 0.39
UBE2D4-201ENST00000222402 PDIA6Q15084 440 aa17.51■□□□□ 0.39
UBE2D4-201ENST00000222402 ATP2B3Q16720 1220 aa17.51■□□□□ 0.39
UBE2D4-201ENST00000222402 PDLIM2Q96JY6 352 aa17.51■□□□□ 0.39
UBE2D4-201ENST00000222402 HELLSQ9NRZ9 838 aa17.51■□□□□ 0.39
UBE2D4-201ENST00000222402 ANKRD18BA2A2Z9 1011 aa17.5■□□□□ 0.39
UBE2D4-201ENST00000222402 SLFNL1Q499Z3 407 aa17.5■□□□□ 0.39
UBE2D4-201ENST00000222402 CEP57L1Q8IYX8 460 aa17.5■□□□□ 0.39
UBE2D4-201ENST00000222402 PXDNQ92626 1479 aa17.5■□□□□ 0.39
UBE2D4-201ENST00000222402 AIDAQ96BJ3 306 aa17.5■□□□□ 0.39
UBE2D4-201ENST00000222402 ZNF500O60304 480 aaPredicted RBP17.5■□□□□ 0.39
UBE2D4-201ENST00000222402 SMC2O95347 1197 aa17.5■□□□□ 0.39
UBE2D4-201ENST00000222402 CHGBP05060 677 aa17.5■□□□□ 0.39
UBE2D4-201ENST00000222402 MAP7D2Q96T17 732 aa17.5■□□□□ 0.39
UBE2D4-201ENST00000222402 CLIP2Q9UDT6 1046 aa17.49■□□□□ 0.39
UBE2D4-201ENST00000222402 ERICH2A1L162 156 aa17.49■□□□□ 0.39
UBE2D4-201ENST00000222402 AKAP17AQ02040 695 aaKnown RBP17.49■□□□□ 0.39
UBE2D4-201ENST00000222402 CCDC186Q7Z3E2 898 aa17.49■□□□□ 0.39
UBE2D4-201ENST00000222402 TMEM87AQ8NBN3 555 aa17.49■□□□□ 0.39
UBE2D4-201ENST00000222402 PUS3Q9BZE2 481 aaKnown RBP17.49■□□□□ 0.39
UBE2D4-201ENST00000222402 TAF6LQ9Y6J9 622 aa17.49■□□□□ 0.39
UBE2D4-201ENST00000222402 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.49■□□□□ 0.39
UBE2D4-201ENST00000222402 SAFBQ15424 915 aaKnown RBP eCLIP17.48■□□□□ 0.39
UBE2D4-201ENST00000222402 TTLL5Q6EMB2 1281 aa17.48■□□□□ 0.39
UBE2D4-201ENST00000222402 PIK3C2AO00443 1686 aa17.48■□□□□ 0.39
UBE2D4-201ENST00000222402 VPS37DQ86XT2 251 aa17.48■□□□□ 0.39
UBE2D4-201ENST00000222402 CCDC144CPQ8IYA2 1237 aa17.48■□□□□ 0.39
UBE2D4-201ENST00000222402 NCOA7Q8NI08 942 aa17.48■□□□□ 0.39
UBE2D4-201ENST00000222402 RGPD8O14715 1765 aaPredicted RBP17.48■□□□□ 0.39
UBE2D4-201ENST00000222402 PRC1O43663 620 aa17.48■□□□□ 0.39
UBE2D4-201ENST00000222402 ZFYP08048 801 aaPredicted RBP17.48■□□□□ 0.39
UBE2D4-201ENST00000222402 XAGE2Q96GT9 111 aa17.47■□□□□ 0.39
UBE2D4-201ENST00000222402 TEX13AQ9BXU3 409 aaPredicted RBP17.47■□□□□ 0.39
UBE2D4-201ENST00000222402 TOB2Q14106 344 aaPredicted RBP17.47■□□□□ 0.39
UBE2D4-201ENST00000222402 SLC9C2Q5TAH2 1124 aa17.47■□□□□ 0.39
UBE2D4-201ENST00000222402 DNAJC10Q8IXB1 793 aa17.47■□□□□ 0.39
UBE2D4-201ENST00000222402 ANO10Q9NW15 660 aa17.47■□□□□ 0.39
UBE2D4-201ENST00000222402 E7EWF7 191 aa17.47■□□□□ 0.39
UBE2D4-201ENST00000222402 PTGS1P23219 599 aa17.47■□□□□ 0.39
UBE2D4-201ENST00000222402 OTUD7BQ6GQQ9 843 aa17.47■□□□□ 0.39
UBE2D4-201ENST00000222402 MICU3Q86XE3 530 aa17.47■□□□□ 0.39
UBE2D4-201ENST00000222402 CTAGE5O15320 804 aa17.46■□□□□ 0.39
UBE2D4-201ENST00000222402 HSPD1P10809 573 aaKnown RBP17.46■□□□□ 0.39
UBE2D4-201ENST00000222402 HELBQ8NG08 1087 aaPredicted RBP17.46■□□□□ 0.39
UBE2D4-201ENST00000222402 BIN1O00499 593 aa17.46■□□□□ 0.39
UBE2D4-201ENST00000222402 NR1I2O75469 434 aa17.46■□□□□ 0.39
UBE2D4-201ENST00000222402 CCDC82Q8N4S0 544 aa17.46■□□□□ 0.39
UBE2D4-201ENST00000222402 SCRN1Q12765 414 aa17.46■□□□□ 0.38
UBE2D4-201ENST00000222402 C16orf45Q96MC5 204 aaPredicted RBP17.46■□□□□ 0.38
UBE2D4-201ENST00000222402 TDO2P48775 406 aa17.45■□□□□ 0.38
UBE2D4-201ENST00000222402 SART3Q15020 963 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms