RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 MAGI1Q96QZ7 1491 aaPredicted RBP12.04□□□□□ -0.48
TRPS1-201ENST00000220888 RBM27Q9P2N5 1060 aaKnown RBP12.04□□□□□ -0.48
TRPS1-201ENST00000220888 CEP83Q9Y592 693 aa12.04□□□□□ -0.48
TRPS1-201ENST00000220888 SHTN1A0MZ66 631 aa12.04□□□□□ -0.48
TRPS1-201ENST00000220888 KLF18A0A0U1RQI7 1052 aa12.04□□□□□ -0.48
TRPS1-201ENST00000220888 LMBR1LQ6UX01 489 aa12.04□□□□□ -0.48
TRPS1-201ENST00000220888 LARGE2Q8N3Y3 721 aa12.04□□□□□ -0.48
TRPS1-201ENST00000220888 ADGRF5Q8IZF2 1346 aa12.04□□□□□ -0.48
TRPS1-201ENST00000220888 SLC9C2Q5TAH2 1124 aa12.04□□□□□ -0.48
TRPS1-201ENST00000220888 BBXQ8WY36 941 aaPredicted RBP12.04□□□□□ -0.48
TRPS1-201ENST00000220888 AKR1B10O60218 316 aa12.03□□□□□ -0.48
TRPS1-201ENST00000220888 RBM25P49756 843 aaKnown RBP12.03□□□□□ -0.48
TRPS1-201ENST00000220888 PTPN14Q15678 1187 aa12.03□□□□□ -0.48
TRPS1-201ENST00000220888 CCDC183Q5T5S1 534 aa12.03□□□□□ -0.48
TRPS1-201ENST00000220888 H0YIN7 160 aa12.03□□□□□ -0.48
TRPS1-201ENST00000220888 BIN1O00499 593 aa12.03□□□□□ -0.48
TRPS1-201ENST00000220888 URI1O94763 535 aaPredicted RBP12.03□□□□□ -0.48
TRPS1-201ENST00000220888 KIF22Q14807 665 aa12.03□□□□□ -0.48
TRPS1-201ENST00000220888 EAPPQ56P03 285 aaPredicted RBP12.03□□□□□ -0.48
TRPS1-201ENST00000220888 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
TRPS1-201ENST00000220888 EP400NLQ6ZTU2 488 aa12.03□□□□□ -0.48
TRPS1-201ENST00000220888 HS2ST1Q7LGA3 356 aa12.03□□□□□ -0.48
TRPS1-201ENST00000220888 IQCGQ9H095 443 aaKnown RBP12.03□□□□□ -0.48
TRPS1-201ENST00000220888 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRPS1-201ENST00000220888 IRS4O14654 1257 aaPredicted RBP12.03□□□□□ -0.48
TRPS1-201ENST00000220888 GNAT2P19087 354 aa12.03□□□□□ -0.48
TRPS1-201ENST00000220888 KRT79Q5XKE5 535 aa12.03□□□□□ -0.48
TRPS1-201ENST00000220888 SLC8A3P57103 927 aa12.02□□□□□ -0.48
TRPS1-201ENST00000220888 SNX16P57768 344 aa12.02□□□□□ -0.48
TRPS1-201ENST00000220888 DDX19AQ9NUU7 478 aaKnown RBP12.02□□□□□ -0.48
TRPS1-201ENST00000220888 CHPF2Q9P2E5 772 aa12.02□□□□□ -0.48
TRPS1-201ENST00000220888 CCDC175P0C221 793 aa12.02□□□□□ -0.49
TRPS1-201ENST00000220888 CCDC87Q9NVE4 849 aa12.02□□□□□ -0.49
TRPS1-201ENST00000220888 SH3BP5O60239 455 aa12.02□□□□□ -0.49
TRPS1-201ENST00000220888 SPOUT1Q5T280 376 aaKnown RBP12.02□□□□□ -0.49
TRPS1-201ENST00000220888 SUPT20HQ8NEM7 779 aa12.02□□□□□ -0.49
TRPS1-201ENST00000220888 SYCE3A1L190 88 aa12.02□□□□□ -0.49
TRPS1-201ENST00000220888 EEF2P13639 858 aaKnown RBP12.02□□□□□ -0.49
TRPS1-201ENST00000220888 RRAGBQ5VZM2 374 aa12.02□□□□□ -0.49
TRPS1-201ENST00000220888 PUS7Q96PZ0 661 aaKnown RBP12.02□□□□□ -0.49
TRPS1-201ENST00000220888 BTG4Q9NY30 223 aa12.02□□□□□ -0.49
TRPS1-201ENST00000220888 N4BP3O15049 544 aa12.01□□□□□ -0.49
TRPS1-201ENST00000220888 RAB3GAP1Q15042 981 aa12.01□□□□□ -0.49
TRPS1-201ENST00000220888 UFL1O94874 794 aa12.01□□□□□ -0.49
TRPS1-201ENST00000220888 GJC1P36383 396 aa12.01□□□□□ -0.49
TRPS1-201ENST00000220888 PRPHP41219 470 aa12.01□□□□□ -0.49
TRPS1-201ENST00000220888 RARSP54136 660 aaKnown RBP12.01□□□□□ -0.49
TRPS1-201ENST00000220888 ASIC1P78348 528 aa12.01□□□□□ -0.49
TRPS1-201ENST00000220888 KIAA1524Q8TCG1 905 aa12.01□□□□□ -0.49
TRPS1-201ENST00000220888 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.01□□□□□ -0.493e-7■□□□□ 10.2
TRPS1-201ENST00000220888 TEX14Q8IWB6 1497 aa12.01□□□□□ -0.49
TRPS1-201ENST00000220888 CALML3P27482 149 aa12.01□□□□□ -0.49
TRPS1-201ENST00000220888 NSD2O96028 1365 aa12.01□□□□□ -0.49
TRPS1-201ENST00000220888 ARHGEF10LQ9HCE6 1279 aa12.01□□□□□ -0.49
TRPS1-201ENST00000220888 NOP56O00567 594 aaKnown RBP12□□□□□ -0.49
TRPS1-201ENST00000220888 AKNAD1Q5T1N1 836 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 ALG1Q9BT22 464 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 GRPEL1Q9HAV7 217 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 M0QZ92 97 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 ALDH1L1O75891 902 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 UQCRHP07919 91 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 GJB2P29033 226 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 SPC25Q9HBM1 224 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 NOS1P29475 1434 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 DPY19L2Q6NUT2 758 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 KIF18AQ8NI77 898 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 CLIP2Q9UDT6 1046 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 RTL9Q8NET4 1388 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 PPFIA3O75145 1194 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 GNA11P29992 359 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 PRKG1Q13976 671 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 TFIP11Q9UBB9 837 aaKnown RBP12□□□□□ -0.49
TRPS1-201ENST00000220888 MAST3O60307 1309 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 GRM8O00222 908 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 NCKAP5LQ9HCH0 1330 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
TRPS1-201ENST00000220888 APBA3O96018 575 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 PLCB3Q01970 1234 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 STX1AQ16623 288 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 LARP6Q9BRS8 491 aaKnown RBP11.99□□□□□ -0.49
TRPS1-201ENST00000220888 GINS2Q9Y248 185 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 UHRF1BP1LA0JNW5 1464 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 PCDH11XQ9BZA7 1347 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 PCDH11YQ9BZA8 1340 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 CCDC14Q49A88 953 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 C6orf163Q5TEZ5 329 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 KSR2Q6VAB6 950 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 NIM1KQ8IY84 436 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 EHBP1Q8NDI1 1231 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.99□□□□□ -0.49
TRPS1-201ENST00000220888 GOLGA1Q92805 767 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 BRF1Q92994 677 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 TRIM6Q9C030 488 aaPredicted RBP11.99□□□□□ -0.49
TRPS1-201ENST00000220888 A0A1W2PRG0 241 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 PSMA7O14818 248 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 ATP2A1O14983 1001 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 TEX11Q8IYF3 940 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 HELBQ8NG08 1087 aaPredicted RBP11.99□□□□□ -0.49
TRPS1-201ENST00000220888 RHPN1Q8TCX5 695 aa11.99□□□□□ -0.49
TRPS1-201ENST00000220888 RNF34Q969K3 372 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms