RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 PALLDQ8WX93 1383 aa10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 JCADQ9P266 1359 aa10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 PTMAP06454 111 aaKnown RBP10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 ATP5JP18859 108 aa10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 CASTP20810 708 aaKnown RBP10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 ANAPC15P60006 121 aa10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 PTH1RQ03431 593 aa10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 BARGINQ6ZT62 677 aa10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 NIP7Q9Y221 180 aaKnown RBP eCLIP10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 RAD50Q92878 1312 aa10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 HSPA4P34932 840 aa10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 JAKMIP1Q96N16 626 aaKnown RBP10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 GREM2Q9H772 168 aa10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 AKAP2Q9Y2D5 859 aa10.63□□□□□ -0.71
MTHFD1-201ENST00000216605 GOLGA6L22H0YM25 854 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 CPA1P15085 419 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 MCM2P49736 904 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 FAM193AP78312 1265 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 TRIM28Q13263 835 aaKnown RBP10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 ATG9AQ7Z3C6 839 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 ZGPATQ8N5A5 531 aaKnown RBP10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 TNPO1Q92973 898 aaKnown RBP10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 LSG1Q9H089 658 aaKnown RBP10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 ARFGEF2Q9Y6D5 1785 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 COL16A1Q07092 1604 aaPredicted RBP10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 A0A0D9SFI3 127 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 ITPK1Q13572 414 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 TMX3Q96JJ7 454 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 RBM8AQ9Y5S9 174 aaKnown RBP10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 SSFA2P28290 1259 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 CTSWP56202 376 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 VPS72Q15906 364 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 RNF20Q5VTR2 975 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 MPHOSPH8Q99549 860 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 SNX14Q9Y5W7 946 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 LAMB4A4D0S4 1761 aa10.62□□□□□ -0.71
MTHFD1-201ENST00000216605 PDE8AO60658 829 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 DMTNQ08495 405 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 WASHC4Q2M389 1173 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 HELBQ8NG08 1087 aaPredicted RBP10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 UTP14AQ9BVJ6 771 aaKnown RBP10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 PAG1Q9NWQ8 432 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 TOGARAM1Q9Y4F4 1720 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 CCDC171Q6TFL3 1326 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 SH3TC1Q8TE82 1336 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 ERVV-1B6SEH8 477 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 KDM4AO75164 1064 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 DDIT3P35638 169 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 FAM43BQ6ZT52 329 aaPredicted RBP10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 SMIM5Q71RC9 77 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 RASEFQ8IZ41 740 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 TTLL11Q8NHH1 800 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 ZNF652Q9Y2D9 606 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 SHANK3Q9BYB0 1731 aa10.61□□□□□ -0.71
MTHFD1-201ENST00000216605 EIF5P55010 431 aaKnown RBP10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 ATP2B3Q16720 1220 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 INTS5Q6P9B9 1019 aaKnown RBP10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 CCDC129Q6ZRS4 1044 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 CYP46A1Q9Y6A2 500 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 NUCB2P80303 420 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 CCDC173Q0VFZ6 552 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 RAB3GAP1Q15042 981 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 FOXD4L6Q3SYB3 417 aaPredicted RBP10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 SUSD4Q5VX71 490 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 FOXD4L3Q6VB84 417 aaPredicted RBP10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 XAGE2Q96GT9 111 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 AK9Q5TCS8 1911 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 CIAO1O76071 339 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 KIF20AO95235 890 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 CHGBP05060 677 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 ADORA1P30542 326 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 DNTTIP2Q5QJE6 756 aaKnown RBP10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 SEC62Q99442 399 aaKnown RBP10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 HAUS7Q99871 368 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 ITGB4P16144 1822 aa10.6□□□□□ -0.71
MTHFD1-201ENST00000216605 COL15A1P39059 1388 aa10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 PATL2C9JE40 543 aaKnown RBP10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 CLSTN1O94985 981 aa10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 TAF3Q5VWG9 929 aa10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 CERKQ8TCT0 537 aa10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 PDRG1Q9NUG6 133 aa10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 CREB3L3Q68CJ9 461 aa10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 PTF1AQ7RTS3 328 aa10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 ZNF589Q86UQ0 364 aaPredicted RBP10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 GAS2L3Q86XJ1 694 aa10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 TCEANC2Q96MN5 208 aa10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 PLCH1Q4KWH8 1693 aa10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 COL22A1Q8NFW1 1626 aaPredicted RBP10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 UBR2Q8IWV8 1755 aa10.59□□□□□ -0.71
MTHFD1-201ENST00000216605 UBN2Q6ZU65 1347 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 HSPA1LP34931 641 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 MMP14P50281 582 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 SLFNL1Q499Z3 407 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 MCMDC2Q4G0Z9 681 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 KBTBD3Q8NAB2 608 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 PHF14O94880 888 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 APPP05067 770 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 PSMA5P28066 241 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 AK2P54819 239 aa10.58□□□□□ -0.72
MTHFD1-201ENST00000216605 ADCK5Q3MIX3 580 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms