RNA–Protein interactions for RNA: ENST00000216274.9

RIPK3-201, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK3, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-201ENST00000216274 GPR108Q9NPR9 543 aa15.42■□□□□ 0.06
RIPK3-201ENST00000216274 CHMP3Q9Y3E7 222 aa15.42■□□□□ 0.06
RIPK3-201ENST00000216274 SCN7AQ01118 1682 aa15.42■□□□□ 0.06
RIPK3-201ENST00000216274 RGL2O15211 777 aa15.41■□□□□ 0.06
RIPK3-201ENST00000216274 ZPR1O75312 459 aa15.41■□□□□ 0.06
RIPK3-201ENST00000216274 TRIM28Q13263 835 aaKnown RBP15.41■□□□□ 0.06
RIPK3-201ENST00000216274 TCIRG1Q13488 830 aa15.41■□□□□ 0.06
RIPK3-201ENST00000216274 MSL1Q68DK7 614 aa15.41■□□□□ 0.06
RIPK3-201ENST00000216274 CCDC171Q6TFL3 1326 aa15.41■□□□□ 0.06
RIPK3-201ENST00000216274 IL15P40933 162 aaPredicted RBP15.41■□□□□ 0.06
RIPK3-201ENST00000216274 NMIQ13287 307 aaPredicted RBP15.41■□□□□ 0.06
RIPK3-201ENST00000216274 UPF3BQ9BZI7 483 aaKnown RBP15.41■□□□□ 0.06
RIPK3-201ENST00000216274 TM6SF1Q9BZW5 370 aa15.41■□□□□ 0.06
RIPK3-201ENST00000216274 BCORQ6W2J9 1755 aa15.4■□□□□ 0.06
RIPK3-201ENST00000216274 DBNLQ9UJU6 430 aaKnown RBP15.4■□□□□ 0.06
RIPK3-201ENST00000216274 CIAO1O76071 339 aa15.39■□□□□ 0.05
RIPK3-201ENST00000216274 ZKSCAN1P17029 563 aaPredicted RBP15.39■□□□□ 0.05
RIPK3-201ENST00000216274 ISY1Q9ULR0 285 aaKnown RBP15.39■□□□□ 0.05
RIPK3-201ENST00000216274 GOLGA6L3A6NEY3 463 aa15.39■□□□□ 0.05
RIPK3-201ENST00000216274 PTH1RQ03431 593 aa15.39■□□□□ 0.05
RIPK3-201ENST00000216274 HSP90AB3PQ58FF7 597 aa15.39■□□□□ 0.05
RIPK3-201ENST00000216274 TICAM2Q86XR7 235 aa15.39■□□□□ 0.05
RIPK3-201ENST00000216274 TTC14Q96N46 770 aa15.39■□□□□ 0.05
RIPK3-201ENST00000216274 SRP68Q9UHB9 627 aaKnown RBP15.39■□□□□ 0.05
RIPK3-201ENST00000216274 PCCAP05165 728 aaPredicted RBP15.38■□□□□ 0.05
RIPK3-201ENST00000216274 KCNJ4P48050 445 aa15.38■□□□□ 0.05
RIPK3-201ENST00000216274 USPL1Q5W0Q7 1092 aa15.38■□□□□ 0.05
RIPK3-201ENST00000216274 PRPF40BQ6NWY9 871 aaKnown RBP15.38■□□□□ 0.05
RIPK3-201ENST00000216274 RASEFQ8IZ41 740 aa15.38■□□□□ 0.05
RIPK3-201ENST00000216274 FHDC1Q9C0D6 1143 aaPredicted RBP15.38■□□□□ 0.05
RIPK3-201ENST00000216274 GZF1Q9H116 711 aaPredicted RBP15.38■□□□□ 0.05
RIPK3-201ENST00000216274 FBXO3Q9UK99 471 aa15.38■□□□□ 0.05
RIPK3-201ENST00000216274 MED23Q9ULK4 1368 aa15.38■□□□□ 0.05
RIPK3-201ENST00000216274 EYA2O00167 538 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 MMP10P09238 476 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 NECTIN1Q15223 517 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 RNF20Q5VTR2 975 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 NOL8Q76FK4 1167 aaKnown RBP15.37■□□□□ 0.05
RIPK3-201ENST00000216274 MAP4K1Q92918 833 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 FAM227BQ96M60 508 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 HAUS7Q99871 368 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 DBNDD2Q9BQY9 259 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 PLA2G12BQ9BX93 195 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 LIMCH1Q9UPQ0 1083 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 RBM8AQ9Y5S9 174 aaKnown RBP15.37■□□□□ 0.05
RIPK3-201ENST00000216274 MAP3K15Q6ZN16 1313 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 KIF13BQ9NQT8 1826 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 ATG9AQ7Z3C6 839 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 SYT17Q9BSW7 474 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 ZNF330Q9Y3S2 320 aaPredicted RBP15.37■□□□□ 0.05
RIPK3-201ENST00000216274 CD2APQ9Y5K6 639 aa15.37■□□□□ 0.05
RIPK3-201ENST00000216274 FSD2A1L4K1 749 aa15.36■□□□□ 0.05
RIPK3-201ENST00000216274 CASTP20810 708 aaKnown RBP15.36■□□□□ 0.05
RIPK3-201ENST00000216274 PSMA5P28066 241 aa15.36■□□□□ 0.05
RIPK3-201ENST00000216274 VPS53Q5VIR6 699 aa15.36■□□□□ 0.05
RIPK3-201ENST00000216274 CREB3L3Q68CJ9 461 aa15.36■□□□□ 0.05
RIPK3-201ENST00000216274 MCTP1Q6DN14 999 aa15.36■□□□□ 0.05
RIPK3-201ENST00000216274 DZIP3Q86Y13 1208 aaKnown RBP15.36■□□□□ 0.05
RIPK3-201ENST00000216274 ZSCAN31Q96LW9 406 aaPredicted RBP15.36■□□□□ 0.05
RIPK3-201ENST00000216274 JAKMIP1Q96N16 626 aaKnown RBP15.36■□□□□ 0.05
RIPK3-201ENST00000216274 BCL2L12Q9HB09 334 aa15.36■□□□□ 0.05
RIPK3-201ENST00000216274 CYP46A1Q9Y6A2 500 aa15.36■□□□□ 0.05
RIPK3-201ENST00000216274 A0A0D9SFI3 127 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 CAMTA2O94983 1202 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 BRD1O95696 1058 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 TM4SF1P30408 202 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 AK2P54819 239 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 CCDC57Q2TAC2 916 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 CLEC4GQ6UXB4 293 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 GIGYF2Q6Y7W6 1299 aaKnown RBP15.35■□□□□ 0.05
RIPK3-201ENST00000216274 ZBTB38Q8NAP3 1195 aaPredicted RBP15.35■□□□□ 0.05
RIPK3-201ENST00000216274 ZSWIM6Q9HCJ5 1215 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 PDRG1Q9NUG6 133 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 HMG20BQ9P0W2 317 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 ZDHHC9Q9Y397 364 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 PARP3Q9Y6F1 533 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 ZNF609O15014 1411 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 NRXN2Q9P2S2 1712 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 CDHR2Q9BYE9 1310 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 PKP1Q13835 747 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 KLHL40Q2TBA0 621 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 TBC1D2BQ9UPU7 963 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 ZNF652Q9Y2D9 606 aa15.35■□□□□ 0.05
RIPK3-201ENST00000216274 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.35■□□□□ 0.05
RIPK3-201ENST00000216274 DNAJC2Q99543 621 aaKnown RBP15.34■□□□□ 0.05
RIPK3-201ENST00000216274 SH2B1Q9NRF2 756 aaPredicted RBP15.34■□□□□ 0.05
RIPK3-201ENST00000216274 C10orf71Q711Q0 1435 aa15.34■□□□□ 0.05
RIPK3-201ENST00000216274 SLC27A2O14975 620 aa15.33■□□□□ 0.05
RIPK3-201ENST00000216274 RUFY3Q7L099 469 aa15.33■□□□□ 0.05
RIPK3-201ENST00000216274 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.33■□□□□ 0.05
RIPK3-201ENST00000216274 NEUROD6Q96NK8 337 aa15.33■□□□□ 0.05
RIPK3-201ENST00000216274 CEP126Q9P2H0 1117 aa15.33■□□□□ 0.05
RIPK3-201ENST00000216274 AKAP2Q9Y2D5 859 aa15.33■□□□□ 0.05
RIPK3-201ENST00000216274 DDX49Q9Y6V7 483 aaKnown RBP15.33■□□□□ 0.05
RIPK3-201ENST00000216274 WDR33Q9C0J8 1336 aaKnown RBP15.33■□□□□ 0.04
RIPK3-201ENST00000216274 ERVV-1B6SEH8 477 aa15.33■□□□□ 0.04
RIPK3-201ENST00000216274 POLRMTO00411 1230 aaKnown RBP15.33■□□□□ 0.04
RIPK3-201ENST00000216274 NFIXQ14938 502 aa15.33■□□□□ 0.04
RIPK3-201ENST00000216274 KBTBD3Q8NAB2 608 aa15.33■□□□□ 0.04
RIPK3-201ENST00000216274 RPAP1Q9BWH6 1393 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms