RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Dnaaf2Q8BPI1 814 aa13.3□□□□□ -0.28
Lig1-211ENSMUST00000177588 4930504O13RikQ8C5Z9 145 aa13.3□□□□□ -0.28
Lig1-211ENSMUST00000177588 Tubb6Q922F4 447 aa13.3□□□□□ -0.28
Lig1-211ENSMUST00000177588 Syt10Q9R0N4 523 aa13.3□□□□□ -0.28
Lig1-211ENSMUST00000177588 Ybx3Q9JKB3 361 aaKnown RBP13.3□□□□□ -0.28
Lig1-211ENSMUST00000177588 Mst1rQ62190 1378 aa13.3□□□□□ -0.28
Lig1-211ENSMUST00000177588 Ms4a1P19437 291 aa13.3□□□□□ -0.28
Lig1-211ENSMUST00000177588 Ppp1r10Q80W00 888 aaKnown RBP13.3□□□□□ -0.28
Lig1-211ENSMUST00000177588 R3hcc1Q8BSI6 488 aa13.3□□□□□ -0.28
Lig1-211ENSMUST00000177588 Rhot2Q8JZN7 620 aa13.3□□□□□ -0.28
Lig1-211ENSMUST00000177588 Cnnm1Q0GA42 951 aa13.29□□□□□ -0.28
Lig1-211ENSMUST00000177588 Usp28Q5I043 1051 aa13.29□□□□□ -0.28
Lig1-211ENSMUST00000177588 Tmem109Q3UBX0 243 aa13.29□□□□□ -0.28
Lig1-211ENSMUST00000177588 Zfp397Q7TNK4 527 aa13.28□□□□□ -0.28
Lig1-211ENSMUST00000177588 Lrrc8aQ80WG5 810 aa13.28□□□□□ -0.28
Lig1-211ENSMUST00000177588 Taf7Q9R1C0 341 aa13.28□□□□□ -0.28
Lig1-211ENSMUST00000177588 Ap5z1Q3U829 807 aa13.28□□□□□ -0.28
Lig1-211ENSMUST00000177588 TfrcQ62351 763 aaKnown RBP13.28□□□□□ -0.28
Lig1-211ENSMUST00000177588 SympkQ80X82 1284 aa13.28□□□□□ -0.28
Lig1-211ENSMUST00000177588 Lmbr1lQ9D1E5 489 aa13.28□□□□□ -0.28
Lig1-211ENSMUST00000177588 Tns2Q8CGB6 1400 aa13.28□□□□□ -0.28
Lig1-211ENSMUST00000177588 Clec11aO88200 328 aa13.28□□□□□ -0.28
Lig1-211ENSMUST00000177588 Ube2oQ6ZPJ3 1288 aa13.28□□□□□ -0.28
Lig1-211ENSMUST00000177588 Znf526Q8BI66 675 aa13.28□□□□□ -0.28
Lig1-211ENSMUST00000177588 Iffo2Q8R2V2 512 aa13.28□□□□□ -0.28
Lig1-211ENSMUST00000177588 TefQ9JLC6 301 aa13.28□□□□□ -0.28
Lig1-211ENSMUST00000177588 Pard3Q99NH2 1333 aa13.27□□□□□ -0.28
Lig1-211ENSMUST00000177588 Fbxl16A2RT62 479 aa13.27□□□□□ -0.28
Lig1-211ENSMUST00000177588 Ggt6Q6PDE7 497 aa13.27□□□□□ -0.28
Lig1-211ENSMUST00000177588 Arid5bQ8BM75 1188 aaKnown RBP13.27□□□□□ -0.28
Lig1-211ENSMUST00000177588 Tbc1d4Q8BYJ6 1307 aa13.27□□□□□ -0.29
Lig1-211ENSMUST00000177588 TrdnE9Q9K5 693 aa13.27□□□□□ -0.29
Lig1-211ENSMUST00000177588 Ssfa2Q922B9 1252 aa13.27□□□□□ -0.29
Lig1-211ENSMUST00000177588 Zfp142G5E869 1843 aa13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 Taf3Q5HZG4 932 aa13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 Cep135Q6P5D4 1140 aa13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 Pcdhb15Q91Y04 786 aa13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 Lrrc59Q922Q8 307 aaKnown RBP13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 PigbQ9JJQ0 542 aa13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 PhaxQ9JJT9 385 aaKnown RBP13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 Ddx60E9PZQ1 1711 aa13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 Ppm1mQ8BU27 406 aa13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 Mtmr3Q8K296 1196 aa13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 Ubxn4Q8VCH8 506 aa13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 Bcl2l12Q9D3J3 255 aa13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 Tjp1P39447 1745 aaKnown RBP13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 Smarcc2Q6PDG5 1213 aa13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 Nek11Q8C0Q4 628 aa13.26□□□□□ -0.29
Lig1-211ENSMUST00000177588 Nlrp9bQ66X22 1003 aa13.25□□□□□ -0.29
Lig1-211ENSMUST00000177588 Prkab2Q6PAM0 271 aa13.25□□□□□ -0.29
Lig1-211ENSMUST00000177588 Ano10Q8BH79 659 aa13.25□□□□□ -0.29
Lig1-211ENSMUST00000177588 Hook1Q8BIL5 728 aa13.25□□□□□ -0.29
Lig1-211ENSMUST00000177588 Fam43aQ8BUP8 424 aa13.25□□□□□ -0.29
Lig1-211ENSMUST00000177588 Kcnk13Q8R1P5 405 aa13.25□□□□□ -0.29
Lig1-211ENSMUST00000177588 Stx1aO35526 288 aa13.25□□□□□ -0.29
Lig1-211ENSMUST00000177588 Iqsec3Q3TES0 1195 aa13.25□□□□□ -0.29
Lig1-211ENSMUST00000177588 Otud6bQ8K2H2 294 aa13.25□□□□□ -0.29
Lig1-211ENSMUST00000177588 Ddx41Q91VN6 622 aaKnown RBP13.25□□□□□ -0.29
Lig1-211ENSMUST00000177588 Efcab2Q9CQ46 164 aa13.25□□□□□ -0.29
Lig1-211ENSMUST00000177588 Cnpy2Q9QXT0 182 aa13.25□□□□□ -0.29
Lig1-211ENSMUST00000177588 Irgm2A0A140LIF8 407 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Rbbp8nlA2ABX0 614 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Hspa1lP16627 641 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Igfbp6P47880 238 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Limch1Q3UH68 1057 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 DbnlQ62418 436 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Ifit1Q64282 463 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Frmd3Q8BHD4 595 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Snw1Q9CSN1 536 aaKnown RBP13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Ccdc112A0AUP1 442 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Mtx1P47802 317 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Rrp1P56183 494 aaKnown RBP13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Jarid2Q62315 1234 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 TrhQ62361 256 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Cdca8Q8BHX3 289 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 CenpqQ9CPQ5 267 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Creld2Q9CYA0 350 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Zkscan4Q5SZT6 480 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Dhx40Q6PE54 779 aaKnown RBP13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Slu7Q8BHJ9 585 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Dnaaf4Q8R368 420 aa13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Pdia6Q922R8 440 aaKnown RBP13.24□□□□□ -0.29
Lig1-211ENSMUST00000177588 Slc39a6Q8C145 765 aa13.23□□□□□ -0.29
Lig1-211ENSMUST00000177588 Usp44Q8C2S0 711 aa13.23□□□□□ -0.29
Lig1-211ENSMUST00000177588 Ints4Q8CIM8 964 aa13.23□□□□□ -0.29
Lig1-211ENSMUST00000177588 Frat1P70339 274 aa13.23□□□□□ -0.29
Lig1-211ENSMUST00000177588 Lrrfip2Q91WK0 415 aa13.23□□□□□ -0.29
Lig1-211ENSMUST00000177588 Vps33aQ9D2N9 598 aa13.23□□□□□ -0.29
Lig1-211ENSMUST00000177588 Dusp10Q9ESS0 483 aa13.23□□□□□ -0.29
Lig1-211ENSMUST00000177588 4930548H24RikQ9D496 437 aa13.22□□□□□ -0.29
Lig1-211ENSMUST00000177588 Surf1P09925 306 aa13.22□□□□□ -0.29
Lig1-211ENSMUST00000177588 FosbP13346 338 aa13.22□□□□□ -0.29
Lig1-211ENSMUST00000177588 Adora1Q60612 326 aa13.22□□□□□ -0.29
Lig1-211ENSMUST00000177588 Mrpl44Q9CY73 333 aaKnown RBP13.22□□□□□ -0.29
Lig1-211ENSMUST00000177588 Zkscan5Q9Z1D8 819 aa13.22□□□□□ -0.29
Lig1-211ENSMUST00000177588 Atp2b1G5E829 1220 aa13.22□□□□□ -0.29
Lig1-211ENSMUST00000177588 Neurod6P48986 337 aa13.22□□□□□ -0.29
Lig1-211ENSMUST00000177588 Anks1aP59672 1150 aa13.22□□□□□ -0.29
Lig1-211ENSMUST00000177588 CrebrfQ8CDG5 640 aaKnown RBP13.22□□□□□ -0.29
Lig1-211ENSMUST00000177588 Ints5Q8CHT3 1018 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 51.1 ms