RNA–Protein interactions for RNA: ENSMUST00000167671.1

Ckap4-202, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 2,606 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-202ENSMUST00000167671 Ubn2Q80WC1 1314 aa20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Clec11aO88200 328 aa20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Ccdc129Q14B48 1034 aa20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Ano10Q8BH79 659 aa20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Ptcd1Q8C2E4 695 aaKnown RBP20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 TefQ9JLC6 301 aa20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Adamtsl3G3UXC7 1706 aa20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Gpatch3Q8BIY1 525 aa20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Tmem87bQ8BKU8 555 aa20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Golph3lQ8R088 285 aaKnown RBP20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Rrs1Q9CYH6 365 aaKnown RBP20.4■□□□□ 0.86
Ckap4-202ENSMUST00000167671 Iqsec3Q3TES0 1195 aa20.39■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Taf3Q5HZG4 932 aa20.39■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Usp44Q8C2S0 711 aa20.39■□□□□ 0.85
Ckap4-202ENSMUST00000167671 TrdnE9Q9K5 693 aa20.39■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Tmem2Q5FWI3 1383 aa20.38■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Timm10P62073 90 aa20.38■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Snw1Q9CSN1 536 aaKnown RBP20.38■□□□□ 0.85
Ckap4-202ENSMUST00000167671 MypnQ5DTJ9 1315 aa20.38■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Zhx1P70121 873 aa20.38■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Smarcc2Q6PDG5 1213 aa20.38■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Dhx40Q6PE54 779 aaKnown RBP20.38■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Fam50bQ9WTJ8 334 aa20.38■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Robo1O89026 1612 aa20.37■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Ubap1lG3UW59 384 aa20.37■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Gm21985Q6P6P5 1106 aa20.37■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Ccdc82Q6PG04 518 aa20.37■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Ripor2Q80U16 1078 aa20.37■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Ddx60E9PZQ1 1711 aa20.37■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Zkscan4Q5SZT6 480 aa20.37■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Dzip1Q8BMD2 852 aa20.37■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Tomm22Q9CPQ3 142 aa20.37■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Chmp3Q9CQ10 224 aa20.37■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Col15a1O35206 1367 aa20.36■□□□□ 0.85
Ckap4-202ENSMUST00000167671 MyclP10166 368 aa20.36■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Cyp2d10P24456 504 aa20.36■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Tmem109Q3UBX0 243 aa20.36■□□□□ 0.85
Ckap4-202ENSMUST00000167671 ThemisQ8BGW0 636 aa20.36■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Rrp1P56183 494 aaKnown RBP20.36■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Otud6bQ8K2H2 294 aa20.36■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Erc1Q99MI1 1120 aa20.36■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Sipa1l2Q80TE4 1722 aa20.35■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Fkbp5Q64378 456 aa20.35■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Rufy2Q8R4C2 606 aa20.35■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Wdr17E9Q271 1322 aa20.35■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Bin1O08539 588 aaKnown RBP20.35■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Rgs9O54828 675 aa20.35■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Zranb3Q6NZP1 1069 aa20.35■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Rbm17Q8JZX4 405 aaKnown RBP20.35■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Phkg2Q9DB30 406 aa20.35■□□□□ 0.85
Ckap4-202ENSMUST00000167671 CenpqQ9CPQ5 267 aa20.34■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Col4a3bpQ9EQG9 624 aa20.34■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Ift57Q8BXG3 429 aa20.34■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Q8BZJ8 459 aa20.34■□□□□ 0.85
Ckap4-202ENSMUST00000167671 XpcP51612 930 aa20.33■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Gnat3Q3V3I2 354 aa20.33■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Hand2Q61039 217 aa20.33■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Spty2d1Q68FG3 682 aa20.33■□□□□ 0.85
Ckap4-202ENSMUST00000167671 Hps3Q91VB4 1002 aa20.33■□□□□ 0.85
Ckap4-202ENSMUST00000167671 OptnQ8K3K8 584 aa20.33■□□□□ 0.84
Ckap4-202ENSMUST00000167671 L1td1Q587J6 782 aaKnown RBP20.32■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Scaf1Q5U4C3 1256 aaKnown RBP20.32■□□□□ 0.84
Ckap4-202ENSMUST00000167671 BrapQ99MP8 591 aa20.32■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Cyp2d34L7N463 504 aa20.32■□□□□ 0.84
Ckap4-202ENSMUST00000167671 4930548H24RikQ9D496 437 aa20.32■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Sult6b1P0CC03 303 aa20.31■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Hspd1P63038 573 aaKnown RBP20.31■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Tmem67Q8BR76 992 aa20.31■□□□□ 0.84
Ckap4-202ENSMUST00000167671 TnrQ8BYI9 1358 aa20.31■□□□□ 0.84
Ckap4-202ENSMUST00000167671 TkfcQ8VC30 578 aa20.31■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Terf2ipQ91VL8 393 aa20.31■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Cdca8Q8BHX3 289 aa20.31■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Clic4Q9QYB1 253 aa20.31■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Exosc10P56960 887 aaKnown RBP20.3■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Trim56Q80VI1 734 aaKnown RBP20.3■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Znf568E9PYI1 671 aa20.3■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Luzp1Q8R4U7 1068 aaKnown RBP20.3■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Trim59Q922Y2 403 aa20.3■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Elf2Q9JHC9 593 aa20.3■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Stk38Q91VJ4 465 aa20.29■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Zeb2Q9R0G7 1215 aa20.29■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Simc1E9Q6E9 1354 aa20.29■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Pramel3A2AHA7 463 aa20.29■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Gm7903A2AWL1 463 aa20.29■□□□□ 0.84
Ckap4-202ENSMUST00000167671 AV320801A2AWL3 467 aa20.29■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Fbxl16A2RT62 479 aa20.29■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Gm15023L7MUB4 467 aa20.29■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Alg3Q8K2A8 438 aa20.29■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Xpo4Q9ESJ0 1151 aa20.29■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Cfap99A0A140LIX9 648 aa20.28■□□□□ 0.84
Ckap4-202ENSMUST00000167671 U2af1l4Q8BGJ9 220 aa20.28■□□□□ 0.84
Ckap4-202ENSMUST00000167671 GphnQ8BUV3 769 aaKnown RBP20.28■□□□□ 0.84
Ckap4-202ENSMUST00000167671 AidaQ8C4Q6 305 aa20.28■□□□□ 0.84
Ckap4-202ENSMUST00000167671 LyarQ08288 388 aaKnown RBP20.28■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Asic4Q7TNS7 539 aa20.28■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Dnaaf4Q8R368 420 aa20.28■□□□□ 0.84
Ckap4-202ENSMUST00000167671 GnpatP98192 678 aa20.27■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Ddx58Q6Q899 926 aa20.27■□□□□ 0.84
Ckap4-202ENSMUST00000167671 SdsQ8VBT2 327 aa20.27■□□□□ 0.84
Ckap4-202ENSMUST00000167671 Ddx41Q91VN6 622 aaKnown RBP20.27■□□□□ 0.84
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms