RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 PsapQ61207 557 aaKnown RBP12.67□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Trerf1Q8BXJ2 1205 aa12.67□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Nlrp3Q8R4B8 1033 aa12.67□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Polr3dQ91WD1 398 aa12.67□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Adcy9P51830 1353 aa12.67□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Wdr33Q8K4P0 1330 aaKnown RBP12.67□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Rbm8a2A0A0N4SUH6 174 aa12.67□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Cfap157Q0VFX2 523 aa12.67□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Znf771Q8BJ90 317 aa12.67□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Rbm8aQ9CWZ3 174 aa12.67□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Gm45140A0A0N4SUM8 220 aa12.66□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Lnx1O70263 728 aa12.66□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Taf5lQ91WQ5 589 aa12.66□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Col1a2Q01149 1372 aa12.66□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Tomm22Q9CPQ3 142 aa12.66□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Nphp3Q7TNH6 1325 aa12.66□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Kansl3A2RSY1 903 aaKnown RBP12.66□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Fam228bQ497Q6 232 aa12.66□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Pde3bQ61409 1100 aa12.66□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Arid5bQ8BM75 1188 aaKnown RBP12.66□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Slc5a1Q8C3K6 665 aa12.66□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Iffo2Q8R2V2 512 aa12.66□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Dnajc2P54103 621 aaKnown RBP12.65□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Ddx11Q6AXC6 880 aa12.65□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Ercc6lQ8BHK9 1240 aa12.65□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 GckrQ91X44 587 aa12.65□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Cnpy2Q9QXT0 182 aa12.65□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Rab3gap1Q80UJ7 981 aa12.65□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Me3Q8BMF3 604 aa12.65□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Eif3bQ8JZQ9 803 aaKnown RBP12.65□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Zbtb3Q91X45 518 aa12.65□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Ak2Q9WTP6 239 aa12.65□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Abcc4E9Q236 1325 aa12.65□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Leo1Q5XJE5 667 aa12.64□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Sgsm2Q80U12 1005 aa12.64□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Nfatc2ipO09130 412 aa12.64□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Tpm3P21107 285 aaKnown RBP12.64□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ccdc129Q14B48 1034 aa12.64□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ugt1a5B2RT14 529 aa12.64□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 1700122O11RikJ3QPW6 241 aa12.64□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Lins1Q3U1D0 764 aa12.64□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ubash3aQ3V3E1 624 aa12.64□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Zfp113Q8C689 439 aa12.64□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 PigbQ9JJQ0 542 aa12.64□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ets1P27577 440 aa12.63□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Taf3Q5HZG4 932 aa12.63□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ifi35Q9D8C4 286 aa12.63□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ap5z1Q3U829 807 aa12.63□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 TrhQ62361 256 aa12.63□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Gtpbp4Q99ME9 634 aaKnown RBP12.63□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Krt85Q9Z2T6 507 aa12.63□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Eif3aP23116 1344 aaKnown RBP12.63□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Dync1i1O88485 628 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Mdm2P23804 489 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Mtx1P47802 317 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Irf9Q61179 399 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Nyap1Q6PFX7 833 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ccz1Q8C1Y8 480 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Bicc1Q99MQ1 977 aaKnown RBP12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Znf704Q9ERQ3 566 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Syt10Q9R0N4 523 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 BcorQ8CGN4 1759 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Hmx1O70218 332 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Mkrn3Q60764 544 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ints5Q8CHT3 1018 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Slc26a8Q8R0C3 999 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Bloc1s2Q9CWG9 143 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Hmgn5Q9JL35 406 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Eef2kO08796 724 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Sema6bO54951 886 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Zeb2Q9R0G7 1215 aa12.62□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 1700006A11RikB9EHI3 544 aa12.61□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 FanccP50652 591 aa12.61□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 TfrcQ62351 763 aaKnown RBP12.61□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 SympkQ80X82 1284 aa12.61□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 4930504O13RikQ8C5Z9 145 aa12.61□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 ZwintQ9CQU5 252 aa12.61□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Grm8P47743 908 aa12.61□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Sf3b2Q3UJB0 878 aaKnown RBP12.61□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ifit1Q64282 463 aa12.61□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 CtifQ6PEE2 600 aaKnown RBP12.61□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Tmem119Q8R138 280 aa12.61□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ca8P28651 291 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Map2k1P31938 393 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Frat1P70339 274 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Cnnm1Q0GA42 951 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Cep57l1Q8VDS7 400 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ssfa2Q922B9 1252 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Kcnb2A6H8H5 907 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 HellsQ60848 821 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Prkab2Q6PAM0 271 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Zfp397Q7TNK4 527 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 MypopQ8R4U1 393 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Hnrnpul1Q8VDM6 859 aaKnown RBP12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Efcab2Q9CQ46 164 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Lmbr1lQ9D1E5 489 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ccnl1Q52KE7 532 aaKnown RBP12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Cep135Q6P5D4 1140 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Ano1Q8BHY3 960 aa12.6□□□□□ -0.39
Prpf40b-202ENSMUST00000118287 Plcd1Q8R3B1 756 aa12.6□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms