RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Lztfl1Q9JHQ5 299 aa15.84■□□□□ 0.13
Col3a1-201ENSMUST00000087883 Gm10563F6WIE4 79 aa15.84■□□□□ 0.13
Col3a1-201ENSMUST00000087883 Ift74Q8BKE9 600 aa15.84■□□□□ 0.13
Col3a1-201ENSMUST00000087883 Pik3ap1Q9EQ32 811 aa15.84■□□□□ 0.13
Col3a1-201ENSMUST00000087883 Tacc3Q9JJ11 631 aa15.84■□□□□ 0.13
Col3a1-201ENSMUST00000087883 Psmb7P70195 277 aa15.84■□□□□ 0.13
Col3a1-201ENSMUST00000087883 Nucb1Q02819 459 aaKnown RBP15.84■□□□□ 0.13
Col3a1-201ENSMUST00000087883 Asic3Q6X1Y6 530 aa15.84■□□□□ 0.13
Col3a1-201ENSMUST00000087883 Naip5Q9R016 1403 aa15.83■□□□□ 0.13
Col3a1-201ENSMUST00000087883 Camk4P08414 469 aa15.83■□□□□ 0.13
Col3a1-201ENSMUST00000087883 ZfxP17012 799 aa15.83■□□□□ 0.13
Col3a1-201ENSMUST00000087883 Igbp1Q61249 340 aa15.83■□□□□ 0.13
Col3a1-201ENSMUST00000087883 Pdzrn3Q69ZS0 1063 aa15.83■□□□□ 0.13
Col3a1-201ENSMUST00000087883 Calcoco1Q8CGU1 691 aa15.83■□□□□ 0.13
Col3a1-201ENSMUST00000087883 CadpsQ80TJ1 1355 aa15.83■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Gtf3c5Q8R2T8 520 aa15.83■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Gys2Q8VCB3 704 aa15.83■□□□□ 0.12
Col3a1-201ENSMUST00000087883 VimP20152 466 aaKnown RBP15.83■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Fam83gQ5SWY7 812 aa15.83■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Kiaa1328Q6NZK5 612 aa15.83■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Slf2Q6P9P0 1278 aa15.83■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Cnnm2Q3TWN3 875 aa15.83■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Taok3Q8BYC6 898 aa15.83■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ccdc38Q8CDN8 563 aa15.83■□□□□ 0.12
Col3a1-201ENSMUST00000087883 RarsQ9D0I9 660 aaKnown RBP15.83■□□□□ 0.12
Col3a1-201ENSMUST00000087883 SynmQ70IV5 1561 aa15.83■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Tubb5P99024 444 aaKnown RBP15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Rassf2Q8BMS9 326 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Frat2Q8K025 231 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Eef1dP57776 281 aaKnown RBP15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Syce1Q9D495 329 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Gm14025A2AP89 1413 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Oas2E9Q9A9 742 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Slc4a4O88343 1079 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Idi2Q8BFZ6 227 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Tti2Q8BGV4 512 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Nol11Q8BJW5 723 aaKnown RBP15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Apol7cQ8C6E1 369 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Klc3Q91W40 508 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Nsfl1cQ9CZ44 370 aaKnown RBP15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Plekho1Q9JIY0 408 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Kif5bQ61768 963 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Naa25Q8BWZ3 972 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Slc14a2Q8R4T9 930 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ebag9Q9D0V7 213 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Rsrc1Q9DBU6 334 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Crocc2F6XLV1 1638 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Mug1P28665 1476 aa15.82■□□□□ 0.12
Col3a1-201ENSMUST00000087883 AU019823E9PUQ3 292 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 MarcksP26645 309 aaKnown RBP15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Tcerg1lQ3B807 590 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ifit1bl2Q3U687 466 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Mindy4Q3UQI9 744 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Caprin2Q05A80 1031 aaKnown RBP15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Rufy3Q9D394 469 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Acot9Q9R0X4 439 aaKnown RBP15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ptgs1P22437 602 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Rapgef3Q8VCC8 918 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Jade3Q6IE82 823 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Fam160b2Q80YR2 744 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Trak2Q6P9N8 913 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Atp1a2Q6PIE5 1020 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ttc5Q99LG4 440 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Lmbr1lQ9D1E5 489 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Capn12Q9ER56 720 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Irx4Q9QY61 515 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ak2Q9WTP6 239 aa15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Rprd2Q6NXI6 1469 aaKnown RBP15.81■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Snd1Q78PY7 910 aaKnown RBP15.8■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Cnpy2Q9QXT0 182 aa15.8■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ppp1r9aH3BJD6 1292 aa15.8■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Hmgb1P63158 215 aaKnown RBP15.8■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ttc12Q8BW49 704 aa15.8■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Terf2ipQ91VL8 393 aa15.8■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Cib2Q9Z309 187 aa15.8■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Mcmdc2E9Q956 681 aa15.8■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Akr1c19G3X9Y6 323 aa15.8■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ccdc82Q6PG04 518 aa15.8■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ptcd1Q8C2E4 695 aaKnown RBP15.8■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Plb1Q3TTY0 1478 aa15.8■□□□□ 0.12
Col3a1-201ENSMUST00000087883 RestQ8VIG1 1082 aa15.79■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Tsnaxip1Q99P25 704 aa15.79■□□□□ 0.12
Col3a1-201ENSMUST00000087883 HellsQ60848 821 aa15.79■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Rab3il1Q8VDV3 383 aa15.79■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Rfx7F8VPJ6 1459 aa15.79■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Kif5cP28738 956 aaKnown RBP15.79■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Eef2P58252 858 aaKnown RBP15.79■□□□□ 0.12
Col3a1-201ENSMUST00000087883 SncbQ91ZZ3 133 aa15.79■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Rfc1P35601 1131 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 GphnQ8BUV3 769 aaKnown RBP15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Tacc2Q9JJG0 1149 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ccdc114Q3UX62 658 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Ifit2Q64112 472 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Krt77Q6IFZ6 572 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 GlmnQ8BZM1 596 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Tnip1Q9WUU8 647 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 ChkbO55229 394 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Adcy3Q8VHH7 1145 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Znf568E9PYI1 671 aa15.78■□□□□ 0.12
Col3a1-201ENSMUST00000087883 Pa2g4P50580 394 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 22,080 RNA–protein pairs in 46.6 ms