RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 SowahdQ8BY98 327 aa9.04□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ppil4Q9CXG3 492 aaKnown RBP9.04□□□□□ -0.96
Trim40-201ENSMUST00000087158 GakQ99KY4 1305 aa9.04□□□□□ -0.96
Trim40-201ENSMUST00000087158 4930523C07RikE9Q2T4 99 aa9.04□□□□□ -0.96
Trim40-201ENSMUST00000087158 Slc4a1P04919 929 aa9.04□□□□□ -0.96
Trim40-201ENSMUST00000087158 Smarcc1P97496 1104 aa9.04□□□□□ -0.96
Trim40-201ENSMUST00000087158 Itga6Q61739 1091 aa9.04□□□□□ -0.96
Trim40-201ENSMUST00000087158 Slfnl1Q8BHW9 410 aa9.04□□□□□ -0.96
Trim40-201ENSMUST00000087158 Sugp2Q8CH09 1067 aa9.04□□□□□ -0.96
Trim40-201ENSMUST00000087158 Slx4ipQ9D7Y9 413 aa9.04□□□□□ -0.96
Trim40-201ENSMUST00000087158 Rbm8a2A0A0N4SUH6 174 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 TsksO54887 585 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Gjb2Q00977 226 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Snai1Q02085 264 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ifit1bl2Q3U687 466 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ddx46Q569Z5 1032 aaKnown RBP9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Rnf20Q5DTM8 973 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Susd4Q8BH32 490 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Zkscan8Q8BSL0 588 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Nek11Q8C0Q4 628 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Afg3l2Q8JZQ2 802 aaKnown RBP9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Kiaa0319lQ8K135 1048 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Cchcr1Q8K2I2 770 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Erc1Q99MI1 1120 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Rbm8aQ9CWZ3 174 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Zcrb1Q9CZ96 217 aaKnown RBP9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 PtmsQ9D0J8 101 aaKnown RBP9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 NgdnQ9DB96 315 aaKnown RBP9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Dpf1Q9QX66 387 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ak2Q9WTP6 239 aa9.03□□□□□ -0.96
Trim40-201ENSMUST00000087158 Npc1l1Q6T3U4 1333 aa9.02□□□□□ -0.96
Trim40-201ENSMUST00000087158 Kcnb2A6H8H5 907 aa9.02□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ddx19aQ61655 478 aaKnown RBP9.02□□□□□ -0.96
Trim40-201ENSMUST00000087158 Sgsm2Q80U12 1005 aa9.02□□□□□ -0.96
Trim40-201ENSMUST00000087158 Ddrgk1Q80WW9 315 aa9.02□□□□□ -0.96
Trim40-201ENSMUST00000087158 Golim4Q8BXA1 655 aa9.02□□□□□ -0.96
Trim40-201ENSMUST00000087158 StrbpQ91WM1 672 aaKnown RBP9.02□□□□□ -0.96
Trim40-201ENSMUST00000087158 Dmrtc1Q9D9R7 182 aa9.02□□□□□ -0.96
Trim40-201ENSMUST00000087158 Kcnq5Q9JK45 933 aa9.02□□□□□ -0.96
Trim40-201ENSMUST00000087158 Trip6Q9Z1Y4 480 aa9.02□□□□□ -0.96
Trim40-201ENSMUST00000087158 C4bP01029 1738 aa9.02□□□□□ -0.97
Trim40-201ENSMUST00000087158 Dctn1O08788 1281 aa9.02□□□□□ -0.97
Trim40-201ENSMUST00000087158 Ppfibp2O35711 882 aa9.02□□□□□ -0.97
Trim40-201ENSMUST00000087158 Anxa1P10107 346 aaKnown RBP9.02□□□□□ -0.97
Trim40-201ENSMUST00000087158 Vgll3P85442 326 aa9.02□□□□□ -0.97
Trim40-201ENSMUST00000087158 Plbd2Q3TCN2 594 aa9.02□□□□□ -0.97
Trim40-201ENSMUST00000087158 Slc38a10Q5I012 1090 aa9.02□□□□□ -0.97
Trim40-201ENSMUST00000087158 PogkQ80TC5 607 aa9.02□□□□□ -0.97
Trim40-201ENSMUST00000087158 Tmx3Q8BXZ1 456 aa9.02□□□□□ -0.97
Trim40-201ENSMUST00000087158 Taok3Q8BYC6 898 aa9.02□□□□□ -0.97
Trim40-201ENSMUST00000087158 Plekho1Q9JIY0 408 aa9.02□□□□□ -0.97
Trim40-201ENSMUST00000087158 Hmg20bQ9Z104 317 aa9.02□□□□□ -0.97
Trim40-201ENSMUST00000087158 Lrp5Q91VN0 1614 aa9.02□□□□□ -0.97
Trim40-201ENSMUST00000087158 TnksQ6PFX9 1320 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Gm13023A2A8N2 498 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 1700006A11RikB9EHI3 544 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Bin2D3Z6Q9 489 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Snrpa1P57784 255 aaKnown RBP9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Atp2b3Q0VF55 1220 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Rtkn2Q14B46 604 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 RubcnlQ3TD16 648 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Zc3h12cQ5DTV4 884 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 St18Q80TY4 1045 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Atf7Q8R0S1 413 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 SnrkQ8VDU5 748 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Ppp4r3bQ922R5 820 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Q9D9S1 216 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Mapk8ip1Q9WVI9 707 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Cfap44E9Q5M6 1843 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 4931408C20RikE9PWP9 1381 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Cyp3a57D3YYZ0 503 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Pde8bE9Q4S1 865 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 NpeppsQ11011 920 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Abcb7Q61102 752 aaKnown RBP9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Rab3gap1Q80UJ7 981 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Tti2Q8BGV4 512 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Ift57Q8BXG3 429 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Mb21d2Q8C525 428 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Bag4Q8CI61 457 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Lrit1Q8K099 624 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Trim44Q9QXA7 346 aa9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 Psma5Q9Z2U1 241 aaKnown RBP9.01□□□□□ -0.97
Trim40-201ENSMUST00000087158 CoblQ5NBX1 1337 aaKnown RBP9□□□□□ -0.97
Trim40-201ENSMUST00000087158 Ugt1a5B2RT14 529 aa9□□□□□ -0.97
Trim40-201ENSMUST00000087158 Cyp2c23E9Q5K4 494 aa9□□□□□ -0.97
Trim40-201ENSMUST00000087158 SlkO54988 1233 aa9□□□□□ -0.97
Trim40-201ENSMUST00000087158 Npy5rO70342 466 aa9□□□□□ -0.97
Trim40-201ENSMUST00000087158 Gimap8Q75N62 688 aa9□□□□□ -0.97
Trim40-201ENSMUST00000087158 Fam160b2Q80YR2 744 aa9□□□□□ -0.97
Trim40-201ENSMUST00000087158 Bloc1s4Q8VED2 215 aa9□□□□□ -0.97
Trim40-201ENSMUST00000087158 Riok1Q922Q2 567 aa9□□□□□ -0.97
Trim40-201ENSMUST00000087158 Ccne2Q9Z238 404 aa9□□□□□ -0.97
Trim40-201ENSMUST00000087158 Arhgap33Q80YF9 1305 aa9□□□□□ -0.97
Trim40-201ENSMUST00000087158 Rufy3Q9D394 469 aa8.99□□□□□ -0.97
Trim40-201ENSMUST00000087158 Plch1Q4KWH5 1682 aa8.99□□□□□ -0.97
Trim40-201ENSMUST00000087158 Fbxl16A2RT62 479 aa8.99□□□□□ -0.97
Trim40-201ENSMUST00000087158 Elmsan1E9Q2I4 1089 aaKnown RBP8.99□□□□□ -0.97
Trim40-201ENSMUST00000087158 Dhx16G3X8X0 1044 aaKnown RBP8.99□□□□□ -0.97
Trim40-201ENSMUST00000087158 Sept1P42209 366 aa8.99□□□□□ -0.97
Trim40-201ENSMUST00000087158 Tpm2P58774 284 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms