RNA–Protein interactions for RNA: ENSMUST00000078680.12

Ush1c-202, Transcript of Harmonin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ush1c, Length 2,047 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1c-202ENSMUST00000078680 Zbtb3Q91X45 518 aa17.86■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Sf3b3Q921M3 1217 aaKnown RBP17.86■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Casz1Q9CWL2 1761 aa17.86■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Col4a5Q63ZW6 1691 aa17.85■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Cyp2c67Q569X9 491 aa17.85■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Nol10Q5RJG1 687 aaKnown RBP17.85■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Erc2Q6PH08 957 aa17.85■□□□□ 0.45
Ush1c-202ENSMUST00000078680 EappQ5BU09 281 aa17.84■□□□□ 0.45
Ush1c-202ENSMUST00000078680 IarsQ8BU30 1262 aa17.84■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Tango6Q8C3S2 1079 aa17.84■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Pnma3Q8JZW8 466 aa17.84■□□□□ 0.45
Ush1c-202ENSMUST00000078680 RestQ8VIG1 1082 aa17.84■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Rcan3Q9JKK0 239 aa17.84■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Usp21Q9QZL6 566 aa17.84■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Kif4P33174 1231 aa17.84■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Hirip3Q8BLH7 601 aa17.84■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Gripap1Q8VD04 806 aa17.84■□□□□ 0.45
Ush1c-202ENSMUST00000078680 4931408C20RikE9PWP9 1381 aa17.84■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Prl3d2F6R3P9 224 aa17.83■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Vwa3bJ9JI28 736 aa17.83■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Magea6O89010 325 aa17.83■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Itga6Q61739 1091 aa17.83■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Magea3Q6T340 320 aa17.83■□□□□ 0.45
Ush1c-202ENSMUST00000078680 Sh3tc1G3X9F6 1346 aa17.83■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Gm45015A0A140LII9 184 aa17.82■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Gm18336A0A140LIU8 765 aa17.82■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Lekr1B2RVN1 116 aa17.82■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Tgfb2P27090 414 aa17.82■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Pa2g4P50580 394 aaKnown RBP17.82■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Gzf1Q4VBD9 706 aa17.82■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Zkscan16A2ALW2 728 aa17.82■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Zscan25B2RX31 543 aa17.82■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Gm7347D3YYI9 267 aa17.82■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Speer4aF8VPX6 267 aa17.82■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Lmnb1P14733 588 aaKnown RBP17.82■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Syce3B5KM66 88 aa17.81■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Atp6v1dP57746 247 aa17.81■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Mindy4Q3UQI9 744 aa17.81■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Rbm27Q5SFM8 1060 aaKnown RBP17.81■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Tpx2A2APB8 745 aaKnown RBP17.81■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Atp6v0a2P15920 856 aa17.81■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Fhdc1Q3ULZ2 1149 aa17.81■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Taf1dQ9D4V4 322 aa17.81■□□□□ 0.44
Ush1c-202ENSMUST00000078680 NcapgE9PWG6 1004 aa17.8■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Irf5P56477 497 aa17.8■□□□□ 0.44
Ush1c-202ENSMUST00000078680 VeztQ3ZK22 780 aa17.8■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Sf3a1Q8K4Z5 791 aaKnown RBP17.8■□□□□ 0.44
Ush1c-202ENSMUST00000078680 LlphQ9D945 130 aaKnown RBP17.8■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Lgr5Q9Z1P4 907 aa17.8■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Ccdc173A0JLY1 547 aa17.79■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Hsp90b1P08113 802 aaKnown RBP17.79■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Ppp4r3aQ6P2K6 820 aa17.79■□□□□ 0.44
Ush1c-202ENSMUST00000078680 AnlnQ8K298 1121 aaKnown RBP17.79■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Gdpd2Q9ESM6 539 aa17.79■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Tbc1d4Q8BYJ6 1307 aa17.79■□□□□ 0.44
Ush1c-202ENSMUST00000078680 EgfrQ01279 1210 aa17.79■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Stk11ipQ3TAA7 1072 aa17.79■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Anp32cQ64G17 123 aa17.79■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Q8C5K5 320 aa17.79■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Sde2Q8K1J5 448 aaKnown RBP17.79■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Snrpa1P57784 255 aaKnown RBP17.78■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Anapc15P60007 132 aa17.78■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Pank2Q3U4S0 443 aa17.78■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Nol8Q3UHX0 1147 aaKnown RBP17.78■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Tbc1d31Q6NXY1 996 aa17.78■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Cypt1Q8CH20 168 aa17.78■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Popdc2Q9ES82 367 aa17.78■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Prl3d3A0A0M6L0J6 224 aa17.77■□□□□ 0.44
Ush1c-202ENSMUST00000078680 MccE9PWI3 1003 aa17.77■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Psd3Q2PFD7 1037 aa17.77■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Tbc1d30Q69ZT9 766 aa17.77■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Rbm17Q8JZX4 405 aaKnown RBP17.77■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Ciapin1Q8WTY4 309 aa17.77■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Mrps5Q99N87 432 aaKnown RBP17.77■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Adarb2Q9JI20 745 aa17.77■□□□□ 0.44
Ush1c-202ENSMUST00000078680 Dok7Q18PE0 504 aa17.77■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Slc38a10Q5I012 1090 aa17.77■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Rps6ka5Q8C050 863 aa17.77■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Camkk2Q8C078 588 aa17.77■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Rhot2Q8JZN7 620 aa17.77■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Chmp3Q9CQ10 224 aa17.77■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Anxa1P10107 346 aaKnown RBP17.76■□□□□ 0.43
Ush1c-202ENSMUST00000078680 AppP12023 770 aa17.76■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Gpr182P43142 395 aa17.76■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Dhx38Q80X98 1228 aa17.76■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Slc39a11Q8BWY7 342 aa17.76■□□□□ 0.43
Ush1c-202ENSMUST00000078680 LratQ9JI60 231 aa17.76■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Bag3Q9JLV1 577 aaKnown RBP17.76■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Oas2E9Q9A9 742 aa17.76■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Smarce1O54941 411 aaKnown RBP17.76■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Rps8P62242 208 aaKnown RBP17.76■□□□□ 0.43
Ush1c-202ENSMUST00000078680 St18Q80TY4 1045 aa17.76■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Taf5lQ91WQ5 589 aa17.76■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Znf609Q8BZ47 1413 aa17.75■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Wdr78E9PYY5 807 aa17.75■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Sult6b1P0CC03 303 aa17.75■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Nlrp1aQ2LKU9 1182 aa17.75■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Ncoa5Q91W39 579 aaKnown RBP17.75■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Bin2D3Z6Q9 489 aa17.74■□□□□ 0.43
Ush1c-202ENSMUST00000078680 Fam184aE9PW83 1143 aa17.74■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms