RNA–Protein interactions for RNA: ENSMUST00000067284.9

Cpsf3-201, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpsf3, Length 2,499 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-201ENSMUST00000067284 Prl7a2O54831 253 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 ZyxQ62523 564 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ankib1Q6ZPS6 1085 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Olfml1Q8BSH2 233 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Zfp113Q8C689 439 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Rhot2Q8JZN7 620 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Tmc2Q8R4P4 888 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Cwc25Q9DBF7 416 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Gm11983V9GXS8 105 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Gm973E9Q295 1059 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 GscQ02591 256 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Sass6Q80UK7 654 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ttc19Q8CC21 365 aa11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ncoa5Q91W39 579 aaKnown RBP11.31□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Fam184aE9PW83 1143 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ube2hP62257 183 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Hvcn1Q3U2S8 269 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 NfkbibQ60778 359 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Nek11Q8C0Q4 628 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Kcnq3Q8K3F6 873 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Cdhr2E9Q7P9 1308 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Lnx1O70263 728 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Slc4a1P04919 929 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ms4a1P19437 291 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Tpm3P21107 285 aaKnown RBP11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Kif2aP28740 705 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Nlrp1aQ2LKU9 1182 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ccnl1Q52KE7 532 aaKnown RBP11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Leo1Q5XJE5 667 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Mybbp1aQ7TPV4 1344 aaKnown RBP11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Tbc1d4Q8BYJ6 1307 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ccdc38Q8CDN8 563 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Rbm17Q8JZX4 405 aaKnown RBP11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Stard3nlQ9DCI3 235 aa11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Psma5Q9Z2U1 241 aaKnown RBP11.3□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 AtrnQ9WU60 1428 aa11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 FosbP13346 338 aa11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Cnnm3Q32NY4 713 aa11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 BcanQ61361 883 aa11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Tbc1d30Q69ZT9 766 aa11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Trim56Q80VI1 734 aaKnown RBP11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Tmx4Q8C0L0 335 aa11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ptcd1Q8C2E4 695 aaKnown RBP11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Bmp2kQ91Z96 1138 aa11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 IncenpQ9WU62 880 aa11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Irgm2A0A140LIF8 407 aa11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Cyp2d34L7N463 504 aa11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Anxa1P10107 346 aaKnown RBP11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Zfp51Q3U4L8 781 aa11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Arglu1Q3UL36 271 aaKnown RBP11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Rnf20Q5DTM8 973 aa11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Usp44Q8C2S0 711 aa11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 AatfQ9JKX4 526 aaKnown RBP11.29□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 CgnP59242 1191 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 TrhQ62361 256 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Fam102bQ8BQS4 339 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Cadps2Q8BYR5 1297 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Bloc1s2Q9CWG9 143 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ndufa8Q9DCJ5 172 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Pard3Q99NH2 1333 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Zfp597E9Q6S0 419 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Eya2O08575 532 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Bach2P97303 839 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Esyt1Q3U7R1 1092 aaKnown RBP11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Gm12185Q5NCB2 835 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ifit1Q64282 463 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ppp4r3aQ6P2K6 820 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Casc1Q6TDU8 730 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Rassf8Q8CJ96 419 aa11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Ddx41Q91VN6 622 aaKnown RBP11.28□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Spata31d1bE9QA57 1361 aa11.27□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Sos2Q02384 1333 aa11.27□□□□□ -0.6
Cpsf3-201ENSMUST00000067284 Nucb2P81117 420 aa11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Ubash3aQ3V3E1 624 aa11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Mctp2Q5RJH2 878 aa11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Shisa4Q8CA71 197 aa11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Nup88Q8CEC0 753 aaKnown RBP11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 NaspQ99MD9 773 aaKnown RBP11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Abca3Q8R420 1704 aa11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Prl3d2F6R3P9 224 aa11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Cavin1O54724 392 aa11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Cers3Q1A3B0 383 aa11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Slx1bQ8BX32 270 aa11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 GptQ8QZR5 496 aa11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Fam213aQ9CYH2 218 aa11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Hmg20bQ9Z104 317 aa11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Mrc1Q61830 1456 aa11.27□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Lmod3E9QA62 571 aa11.26□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 U2af2P26369 475 aaKnown RBP11.26□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Stat1P42225 749 aa11.26□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Ctr9Q62018 1173 aaKnown RBP11.26□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Ccdc158Q8CDI6 1109 aa11.26□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Ulbp1Q8HWA3 334 aa11.26□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 PhaxQ9JJT9 385 aaKnown RBP11.26□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Ccne2Q9Z238 404 aa11.26□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Ric1Q69ZJ7 1422 aa11.26□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Crb1Q8VHS2 1405 aa11.26□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Cyp19a1P28649 503 aa11.26□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Hspd1P63038 573 aaKnown RBP11.26□□□□□ -0.61
Cpsf3-201ENSMUST00000067284 Cct2P80314 535 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms