RNA–Protein interactions for RNA: ENSMUST00000036229.12

Ctdp1-201, Transcript of RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdp1, Length 3,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1-201ENSMUST00000036229 Efcab8Q8C9R9 203 aa16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Dydc1Q9D9T0 175 aa16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Speer4f2E9Q366 295 aa16.84■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Skap2Q3UND0 358 aa16.84■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Ccdc82Q6PG04 518 aa16.84■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Znf653Q6YND2 615 aa16.84■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Atf7Q8R0S1 413 aa16.84■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Hps3Q91VB4 1002 aa16.84■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Smc2Q8CG48 1191 aaKnown RBP16.84■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Slc52a2Q9D8F3 450 aa16.84■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Myo3aQ8K3H5 1613 aa16.84■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 XpcP51612 930 aa16.84■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Limch1Q3UH68 1057 aa16.84■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 PpanQ91YU8 470 aaKnown RBP16.84■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Nphp4P59240 1425 aa16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Dnai2A2AC93 623 aa16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Ccdc24E9PUW8 296 aa16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Csrnp1P59054 583 aa16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Anks1aP59672 1150 aa16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Chpf2Q3UU43 768 aa16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Gngt1Q61012 74 aa16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Pde3bQ61409 1100 aa16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Ltv1Q6NSQ7 470 aaKnown RBP16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Snd1Q78PY7 910 aaKnown RBP16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Ccdc186Q8C9S4 917 aa16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Dusp10Q9ESS0 483 aa16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Kank3Q9Z1P7 791 aa16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Abcc3B2RX12 1523 aa16.83■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Odf2A3KGV1 830 aaKnown RBP16.83■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Hand2Q61039 217 aa16.83■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Uggt2E9Q4X2 1504 aa16.83■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Capza3P70190 299 aa16.83■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Nek9Q8K1R7 984 aa16.83■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Mtmr3Q8K296 1196 aa16.83■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Tlr7P58681 1050 aa16.82■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Ube2q2Q8K2Z8 378 aa16.82■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Ppp2r2cQ8BG02 447 aa16.82■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Gpt2Q8BGT5 522 aa16.82■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Ms4a2P20490 235 aa16.82■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 MmeQ61391 750 aa16.82■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Agtpbp1Q641K1 1218 aa16.82■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Dpf1Q9QX66 387 aa16.82■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Fyb1O35601 819 aa16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 LtkP08923 888 aa16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Erlin2Q8BFZ9 340 aa16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Kif2bQ8C0N1 668 aa16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 GzmnQ920S1 248 aa16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Creld2Q9CYA0 350 aa16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Pdcd6ipQ9WU78 869 aaKnown RBP16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Aox4Q3TYQ9 1336 aa16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 MarsQ68FL6 902 aaKnown RBP16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Ptch1Q61115 1434 aa16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Ccdc121E9Q6D3 323 aa16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Atp6v1aP50516 617 aaKnown RBP16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Idi2Q8BFZ6 227 aa16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Tada3Q8R0L9 432 aa16.81■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Sos1Q62245 1319 aa16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Ppp1r15aP17564 657 aa16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Zfp317Q8C0Q5 607 aa16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Rab3il1Q8VDV3 383 aa16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Spty2d1Q68FG3 682 aa16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Abcf1Q6P542 837 aaKnown RBP16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Fnbp4Q6ZQ03 1031 aa16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 TxlnbQ8VBT1 685 aa16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Q8VDP2 222 aa16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Capn15Q9JLG8 1095 aa16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Enc1O35709 589 aa16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 EmbP21995 330 aa16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Pde6bP23440 856 aa16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Ets1P27577 440 aa16.8■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Kdm5aQ3UXZ9 1690 aa16.79■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Ier5O89113 308 aa16.79■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Ddx46Q569Z5 1032 aaKnown RBP16.79■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Gm156Q58A37 223 aa16.79■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Dhx40Q6PE54 779 aaKnown RBP16.79■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 LarsQ8BMJ2 1178 aa16.79■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Srek1Q8BZX4 494 aaKnown RBP16.79■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Cep89Q9CZX2 791 aa16.79■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Bag3Q9JLV1 577 aaKnown RBP16.79■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Bicdl2Q8CHW5 507 aa16.79■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Mrpl44Q9CY73 333 aaKnown RBP16.79■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Cct4P80315 539 aaKnown RBP16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Eif3j1Q3UGC7 261 aaKnown RBP16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Eif3j2Q66JS6 263 aa16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Sgsm2Q80U12 1005 aa16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Kirrel3Q8BR86 778 aa16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Bmp2kQ91Z96 1138 aa16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 IncenpQ9WU62 880 aa16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Atp8b3Q6UQ17 1335 aa16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Kidins220E9Q9B7 1793 aa16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Specc1lQ2KN98 1118 aaKnown RBP16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Cavin2Q63918 418 aaKnown RBP16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Ttc12Q8BW49 704 aa16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Ctdnep1Q3TP92 244 aa16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Tbc1d30Q69ZT9 766 aa16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Sh2b1Q91ZM2 756 aa16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Tnip1Q9WUU8 647 aa16.78■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 ShprhQ7TPQ3 1674 aa16.77■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Hdgfl1Q2VPR5 283 aa16.77■□□□□ 0.28
Ctdp1-201ENSMUST00000036229 Fam170aQ66LM6 333 aa16.77■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms