RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Ccdc181Q80ZU5 509 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 St5Q924W7 1134 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Atg3Q9CPX6 314 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Lekr1B2RVN1 116 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Tmem266Q8BZB3 538 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Slc39a6Q8C145 765 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ccdc73Q8CDM4 1066 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Tshz3Q8CGV9 1081 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ripk4Q9ERK0 786 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Spg7Q3ULF4 781 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ccdc93Q7TQK5 629 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ccdc158Q8CDI6 1109 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Tyro3P55144 880 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Anp32cQ64G17 123 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Tmem67Q8BR76 992 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ttc14Q9CSP9 761 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Rims2Q9EQZ7 1530 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Tubb5P99024 444 aaKnown RBP11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Esco1Q69Z69 843 aa11.44□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Izumo3A6PWV3 263 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Gm7347D3YYI9 267 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Speer4aF8VPX6 267 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Foxp4Q9DBY0 795 aaKnown RBP11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Kcnn1Q9EQR3 537 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 ParvgQ9ERD8 331 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Rlbp1Q9Z275 317 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 CebpzP53569 1052 aaKnown RBP11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ankrd23Q812A3 306 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Abcc12Q80WJ6 1366 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Trim30cD3YVI9 513 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Esyt1Q3U7R1 1092 aaKnown RBP11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Mindy4Q3UQI9 744 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Cyp27a1Q9DBG1 533 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ppp1r3fQ9JIG4 799 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Sel1lQ9Z2G6 790 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 4930407I10RikD3Z5T8 1512 aa11.43□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Clul1Q3ZRW6 464 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Tacc1Q6Y685 774 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Miga2Q8BK03 593 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Smtnl1Q99LM3 459 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 AceP09470 1312 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ier5O89113 308 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ms4a1P19437 291 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 NppbP40753 121 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ppp1r10Q80W00 888 aaKnown RBP11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Slc14a2Q8R4T9 930 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Krt25Q8VCW2 446 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Stk36Q69ZM6 1316 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Zkscan4Q5SZT6 480 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Pard3Q99NH2 1333 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Rbm8a2A0A0N4SUH6 174 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Serpinb6bO08804 377 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Rad23bP54728 416 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 AcrbpQ3V140 540 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Gzf1Q4VBD9 706 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Vps18Q8R307 973 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Rbm8aQ9CWZ3 174 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Zcrb1Q9CZ96 217 aaKnown RBP11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Dydc2Q9D3X8 139 aa11.42□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Syt1P46096 421 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Lrrc45Q8CIM1 670 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Hdac6Q9Z2V5 1149 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Cep170bQ80U49 1574 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Erbb4Q61527 1308 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Igsf1Q7TQA1 1317 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 CalcaP70160 136 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Rnf187Q8BFX1 236 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Rnf41Q8BH75 317 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Serpina10Q8R121 448 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Gtpbp4Q99ME9 634 aaKnown RBP11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Zkscan16A2ALW2 728 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Gng11P61953 73 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ltv1Q6NSQ7 470 aaKnown RBP11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Jade2Q6ZQF7 829 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Fam160b2Q80YR2 744 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Baiap2l1Q9DBJ3 514 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Syt10Q9R0N4 523 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 P2rx7Q9Z1M0 595 aa11.41□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Gadd45bP22339 160 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Atp2b3Q0VF55 1220 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Utp18Q5SSI6 552 aaKnown RBP11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 TxlnaQ6PAM1 554 aaKnown RBP11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Fam76aQ922G2 307 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 MaddQ80U28 1577 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Igflr1Q3U4N7 345 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Pdzrn3Q69ZS0 1063 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Exoc8Q6PGF7 716 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ccdc172Q810N9 267 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Krt23Q99PS0 422 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Smco2Q9DA21 347 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Il1rapl2Q9ERS6 686 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Aifm3Q3TY86 605 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Tspyl3Q3UYP3 334 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Wdr93Q402B2 695 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Tmem143Q8VD26 458 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Dip2bQ3UH60 1574 aa11.4□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Atf5O70191 283 aa11.4□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Ppp1r21Q3TDD9 780 aa11.4□□□□□ -0.59
Ldlr-201ENSMUST00000034713 Tmem119Q8R138 280 aa11.4□□□□□ -0.59
Ldlr-201ENSMUST00000034713 RestQ8VIG1 1082 aa11.4□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms