RNA–Protein interactions for RNA: ENSMUST00000031628.9

Ptcd1-201, Transcript of Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptcd1, Length 3,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1-201ENSMUST00000031628 Leo1Q5XJE5 667 aa12.57□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Rbm17Q8JZX4 405 aaKnown RBP12.57□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 InsrrQ9WTL4 1300 aa12.57□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Abca15E9PWH4 1668 aa12.57□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Pde3bQ61409 1100 aa12.57□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Zfp113Q8C689 439 aa12.57□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Spata31d1bE9QA57 1361 aa12.56□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Kansl3A2RSY1 903 aaKnown RBP12.56□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Nfatc2ipO09130 412 aa12.56□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 CebpzP53569 1052 aaKnown RBP12.56□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Anp32cQ64G17 123 aa12.56□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Syde2E9PUP1 1314 aa12.56□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Usp25P57080 1055 aa12.56□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Ankib1Q6ZPS6 1085 aa12.56□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Fam177a1Q8BR63 207 aa12.56□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Ssr1Q9CY50 286 aaKnown RBP12.56□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Mctp2Q5RJH2 878 aa12.56□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Mx2Q9WVP9 655 aa12.56□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Anxa1P10107 346 aaKnown RBP12.55□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Ano1Q8BHY3 960 aa12.55□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Slit1Q80TR4 1531 aa12.55□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Cavin1O54724 392 aa12.55□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Gnat3Q3V3I2 354 aa12.55□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Zpr1Q62384 459 aa12.55□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Ccdc158Q8CDI6 1109 aa12.55□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Tns2Q8CGB6 1400 aa12.55□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 TnmdQ9EP64 317 aa12.55□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Sh3bgrQ9WUZ7 214 aa12.55□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 FocadA2AKG8 1798 aa12.54□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Stat1P42225 749 aa12.54□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Cadps2Q8BYR5 1297 aa12.54□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Cep57l1Q8VDS7 400 aa12.54□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Igbp1bQ9QZ29 343 aa12.54□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 IncenpQ9WU62 880 aa12.54□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Ubap1lG3UW59 384 aa12.54□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Sult6b1P0CC03 303 aa12.54□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Cyp2d10P24456 504 aa12.54□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 4930572O03RikQ8C5Y0 211 aa12.54□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 E2f4Q8R0K9 410 aa12.54□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Tnks1bp1P58871 1720 aa12.54□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 BcorQ8CGN4 1759 aa12.54□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Fez2Q6TYB5 348 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Nxf7Q80SZ6 620 aaKnown RBP12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Trim56Q80VI1 734 aaKnown RBP12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Tmem87bQ8BKU8 555 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Nrbp1Q99J45 535 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Myd88P22366 296 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 U2af2P26369 475 aaKnown RBP12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Hvcn1Q3U2S8 269 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Spty2d1Q68FG3 682 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Ptcd1Q8C2E4 695 aaKnown RBP12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Mb21d2Q8C525 428 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Hnrnpul1Q8VDM6 859 aaKnown RBP12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Ncoa5Q91W39 579 aaKnown RBP12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Tyro3P55144 880 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Fam170aQ66LM6 333 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Fsd1Q7TPM6 496 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Nek11Q8C0Q4 628 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Rhot2Q8JZN7 620 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Pms1Q8K119 917 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Flad1Q8R123 492 aa12.53□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Ccdc173A0JLY1 547 aa12.52□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Ankle2Q6P1H6 964 aa12.52□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Krt85Q9Z2T6 507 aa12.52□□□□□ -0.4
Ptcd1-201ENSMUST00000031628 Kif3aP28741 701 aa12.52□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Irx2P81066 474 aa12.52□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Lins1Q3U1D0 764 aa12.52□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ice2Q3UZ18 988 aaKnown RBP12.52□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ano6Q6P9J9 911 aa12.52□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Atp1a3Q6PIC6 1013 aa12.52□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ddx58Q6Q899 926 aa12.52□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Smim5Q8BT42 78 aa12.52□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Eif3bQ8JZQ9 803 aaKnown RBP12.52□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 PhaxQ9JJT9 385 aaKnown RBP12.52□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Mybbp1aQ7TPV4 1344 aaKnown RBP12.52□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Fam184aE9PW83 1143 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Zfp317Q8C0Q5 607 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 GptQ8QZR5 496 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Tbc1d7Q9D0K0 293 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Stard3nlQ9DCI3 235 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Add3Q9QYB5 706 aaKnown RBP12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Col4a1P02463 1669 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Tmem67Q8BR76 992 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ints5Q8CHT3 1018 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Plcd1Q8R3B1 756 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ltb4r2Q9JJL9 360 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 PdcQ9QW08 244 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Zkscan7E9PVW1 718 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Zbtb21E9Q444 1094 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Znf771Q8BJ90 317 aa12.51□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Atg9aQ68FE2 551 aa12.5□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Zbtb40Q6PCS8 1258 aa12.5□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Kcnf1Q7TSH7 493 aa12.5□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Rab3gap1Q80UJ7 981 aa12.5□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Cwc25Q9DBF7 416 aa12.5□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Cnpy2Q9QXT0 182 aa12.5□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Zfp142G5E869 1843 aa12.5□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Prl3d3A0A0M6L0J6 224 aa12.5□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 1700006A11RikB9EHI3 544 aa12.5□□□□□ -0.41
Ptcd1-201ENSMUST00000031628 Ptgs1P22437 602 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms