RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Cyb5rlB1AS42 316 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 FerP70451 823 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Specc1lQ2KN98 1118 aaKnown RBP10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ifit1bl2Q3U687 466 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Tbc1d31Q6NXY1 996 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ccdc14Q8K2J4 934 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Vps37cQ8R105 352 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Slc14a2Q8R4T9 930 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Golga1Q9CW79 758 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Q9D5Q8 446 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Letm1Q9Z2I0 738 aa10.37□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Rbbp8nlA2ABX0 614 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Map3k2Q61083 619 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Nek11Q8C0Q4 628 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ubxn1Q922Y1 297 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 ScribQ80U72 1612 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Camk4P08414 469 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Mtus1Q5HZI1 1210 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 RarsQ9D0I9 660 aaKnown RBP10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Amotl1Q9D4H4 968 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Il1rapl2Q9ERS6 686 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Taf7Q9R1C0 341 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Fam135aQ6NS59 1506 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 KdrP35918 1367 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Kif5cP28738 956 aaKnown RBP10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Sos2Q02384 1333 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 SsbP32067 415 aaKnown RBP10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ncf1Q09014 390 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Chpf2Q3UU43 768 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ranbp6Q8BIV3 1105 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Arhgap24Q8C4V1 747 aa10.36□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Rprd2Q6NXI6 1469 aaKnown RBP10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Rbm8a2A0A0N4SUH6 174 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Mcmdc2E9Q956 681 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Nek5Q7TSC3 627 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Sec62Q8BU14 398 aaKnown RBP10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Gtpbp10Q8K013 366 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Rbm8aQ9CWZ3 174 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Tbc1d7Q9D0K0 293 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Tyro3P55144 880 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Mcm6P97311 821 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Atp2b3Q0VF55 1220 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Pabpn1lQ5XFR0 273 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Asic1Q6NXK8 526 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Kdm4aQ8BW72 1064 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Stac3Q8BZ71 360 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Nsfl1cQ9CZ44 370 aaKnown RBP10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Riok3Q9DBU3 519 aaKnown RBP10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Dpf1Q9QX66 387 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Mcm5P49718 733 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 IqceQ6PCQ0 778 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 HomezQ80W88 542 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ssx2ipQ8VC66 615 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Tbc1d8Q9Z1A9 1134 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Mrc2Q64449 1479 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Esyt1Q3U7R1 1092 aaKnown RBP10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ccne1Q61457 408 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Vps16Q920Q4 839 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Syt10Q9R0N4 523 aa10.35□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Lcmt1A0A0U1RNF2 332 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Prim1P20664 417 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 MarcksP26645 309 aaKnown RBP10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Traf1P39428 409 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Nkx1-2P42580 305 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Snx25Q3ZT31 840 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Krt77Q6IFZ6 572 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Calml3Q9D6P8 149 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Mrpl12Q9DB15 201 aaKnown RBP10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 InsrP15208 1372 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Abcc5Q9R1X5 1436 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Eps15P42567 897 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Akr1b8P45377 316 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ltv1Q6NSQ7 470 aaKnown RBP10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Snx13Q6PHS6 957 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ano1Q8BHY3 960 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 NsmfQ99NF2 532 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Syap1Q9D5V6 365 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Cabp5Q9JLK3 173 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Irx4Q9QY61 515 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Gm10563F6WIE4 79 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Zc3h12cQ5DTV4 884 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Cyp7a1Q64505 503 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Cplx4Q80WM3 160 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Lin9Q8C735 542 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Gapvd1Q6PAR5 1458 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Heatr4E9Q357 955 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Grm8P47743 908 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ppp2r5eQ61151 467 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Ctnna3Q65CL1 895 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Hirip3Q8BLH7 601 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Cfap57Q9D180 1249 aa10.34□□□□□ -0.75
Ccdc47-201ENSMUST00000002043 Krt13P08730 437 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Gm5935Q497S0 212 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Tsga10Q6NY15 697 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Mpp4Q6P7F1 635 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Kdm1aQ6ZQ88 853 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Cnot6lQ8VEG6 555 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Grpel1Q99LP6 217 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Mxra7Q9CZH7 178 aa10.33□□□□□ -0.76
Ccdc47-201ENSMUST00000002043 Trim27Q62158 513 aa10.33□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms