RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 KIFAP3Q92845 792 aa3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 SEC22AQ96IW7 307 aa3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 CELF6Q96J87 481 aaKnown RBP3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 MS4A14Q96JA4 679 aa3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 IL4I1Q96RQ9 567 aa3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 KRTAP1-5Q9BYS1 174 aa3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 POPDC2Q9HBU9 364 aa3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 PAK1IP1Q9NWT1 392 aaPredicted RBP3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 DEC1Q9P2X7 70 aa3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 SPRR3Q9UBC9 169 aa3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 ZNF639Q9UID6 485 aa3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 RIMS3Q9UJD0 308 aa3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 UBQLN1Q9UMX0 589 aaKnown RBP3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 PLLPQ9Y342 182 aa3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 PCNX1Q96RV3 2341 aa3.89□□□□□ -1.79
TRAPPC9-216ENST00000634178 SCN1AP35498 2009 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 SETD2Q9BYW2 2564 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 F8P00451 2351 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 TCHHQ07283 1943 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 LOC100131303A0A0U1RQF7 123 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 C10orf142B7Z368 130 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 TRDCB7Z8K6 153 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 CACNG3O60359 315 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 ZNF253O75346 499 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 GPX5O75715 221 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 DUSP14O95147 198 aaKnown RBP3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 GP1BAP07359 652 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 NCK1P16333 377 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 CHMLP26374 656 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 TNFSF9P41273 254 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 TPMTP51580 245 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 IST1P53990 364 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 ATP1B3P54709 279 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 OC90Q02509 493 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 MRPL28Q13084 256 aaKnown RBP3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 DNAJC3Q13217 504 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 ASAH1Q13510 395 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 CUL1Q13616 776 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 SLC22A6Q4U2R8 563 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 C14orf177Q52M58 125 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 ARMC12Q5T9G4 340 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 SLC22A10Q63ZE4 541 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 OR2A2Q6IF42 318 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 UFSP1Q6NVU6 142 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 GDPD3Q7L5L3 318 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 EGFL6Q8IUX8 553 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 CD302Q8IX05 232 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 NRMQ8IXM6 262 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 BLIDQ8IZY5 108 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 SVOPLQ8N434 492 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 OR1L4Q8NGR5 311 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 ZNF564Q8TBZ8 553 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 MAGEE2Q8TD90 523 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 FAF2Q96CS3 445 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 CXorf40BQ96DE9 158 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 SERAC1Q96JX3 654 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 ZNF670Q9BS34 389 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 UBXN6Q9BZV1 441 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 YY1AP1Q9H869 796 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 RAB20Q9NX57 234 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 ONECUT1Q9UBC0 465 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 IKZF2Q9UKS7 526 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 ERVW-1Q9UQF0 538 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 CAB39Q9Y376 341 aaPredicted RBP3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 HCFC1P51610 2035 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 LRRK1Q38SD2 2015 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 NF1P21359 2839 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 NUMA1Q14980 2115 aa3.88□□□□□ -1.79
TRAPPC9-216ENST00000634178 PDZD2O15018 2839 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 KLF18A0A0U1RQI7 1052 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 A0A1B0GWB2 263 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 HEATR9A2RTY3 570 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 BTBD17A6NE02 478 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 IDSB3KWA1 339 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 PIRO00625 290 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 RGS16O15492 202 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 RAMP3O60896 148 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 ATP5LO75964 103 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 VENTXO95231 258 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 CLTAP09496 248 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 GCKP35557 465 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 KIR2DS2P43631 304 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 ARRB1P49407 418 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 SLC25A1P53007 311 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 CLDN6P56747 220 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 KDSRQ06136 332 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 ZFP36L1Q07352 338 aaKnown RBP3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 ARL6IP1Q15041 203 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 TRIM69Q86WT6 500 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 NUS1Q96E22 293 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 CCT8L2Q96SF2 557 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 PKMYT1Q99640 499 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 MCHR1Q99705 422 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 ACBD6Q9BR61 282 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 ISG20L2Q9H9L3 353 aaKnown RBP3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 B3GNT2Q9NY97 397 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 TMED5Q9Y3A6 229 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 ABCA2Q9BZC7 2435 aa3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 COL27A1Q8IZC6 1860 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC9-216ENST00000634178 IQANK1A0A1B0GTG1 560 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms