RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 CSNK2A1P68400 391 aaPredicted RBP10.48□□□□□ -0.73
LINC00538-201ENST00000626109 PRR5P85299 388 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 CDK5Q00535 292 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 C4orf17Q53FE4 359 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 CENPVQ7Z7K6 275 aaPredicted RBP10.48□□□□□ -0.73
LINC00538-201ENST00000626109 AMER3Q8N944 861 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 CSNK2A3Q8NEV1 391 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 OR5T3Q8NGG3 340 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 OR13C3Q8NGS6 347 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 MRGPRX4Q96LA9 322 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 FOXN4Q96NZ1 517 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 MED18Q9BUE0 208 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 SCNM1Q9BWG6 230 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 JAM3Q9BX67 310 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 LYRM4Q9HD34 91 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 MRPS18AQ9NVS2 196 aaKnown RBP10.48□□□□□ -0.73
LINC00538-201ENST00000626109 ERVK13-1Q9NX77 482 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 RDH8Q9NYR8 311 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 HCN3Q9P1Z3 774 aa10.48□□□□□ -0.73
LINC00538-201ENST00000626109 MRPS33Q9Y291 106 aaKnown RBP10.48□□□□□ -0.73
LINC00538-201ENST00000626109 EXOSC1Q9Y3B2 195 aaKnown RBP10.48□□□□□ -0.73
LINC00538-201ENST00000626109 TMEM184BQ9Y519 407 aaPredicted RBP10.48□□□□□ -0.73
LINC00538-201ENST00000626109 PIEZO1Q92508 2521 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 CNOT1A5YKK6 2376 aaKnown RBP10.47□□□□□ -0.73
LINC00538-201ENST00000626109 FBLL1A6NHQ2 334 aaKnown RBP10.47□□□□□ -0.73
LINC00538-201ENST00000626109 CHST10O43529 356 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 TPST2O60704 377 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 HCN1O60741 890 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 SEMA7AO75326 666 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 VAMP5O95183 116 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 IFNA6P05013 189 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 ADRA2AP08913 450 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 ACP2P11117 423 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 RNH1P13489 461 aaKnown RBP10.47□□□□□ -0.73
LINC00538-201ENST00000626109 SPNP16150 400 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 PAICSP22234 425 aaKnown RBP10.47□□□□□ -0.73
LINC00538-201ENST00000626109 MMP11P24347 488 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 DNASE1P24855 282 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 NAA10P41227 235 aaPredicted RBP10.47□□□□□ -0.73
LINC00538-201ENST00000626109 WNT4P56705 351 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 RAB38P57729 211 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 PSPHP78330 225 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 RTP5Q14D33 572 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 TSC22D1Q15714 1073 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 KIF26BQ2KJY2 2108 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 SYT14P1Q58G82 188 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 YIF1BQ5BJH7 314 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 SLC27A4Q6P1M0 643 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 XKRXQ6PP77 449 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 RAB43Q86YS6 212 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 CA13Q8N1Q1 262 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 CPEB3Q8NE35 698 aaKnown RBP10.47□□□□□ -0.73
LINC00538-201ENST00000626109 OR4D11Q8NGI4 311 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 OR52I1Q8NGK6 324 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.47□□□□□ -0.73
LINC00538-201ENST00000626109 SLC25A46Q96AG3 418 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 KCTD7Q96MP8 289 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 ZNF582Q96NG8 517 aaPredicted RBP10.47□□□□□ -0.73
LINC00538-201ENST00000626109 HOXD1Q9GZZ0 328 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 ANKRD19PQ9H560 264 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 CACYBPQ9HB71 228 aaKnown RBP10.47□□□□□ -0.73
LINC00538-201ENST00000626109 CHST11Q9NPF2 352 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 PARPBPQ9NWS1 579 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 TEX10Q9NXF1 929 aaPredicted RBP10.47□□□□□ -0.73
LINC00538-201ENST00000626109 ALKBH4Q9NXW9 302 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 TESQ9UGI8 421 aaKnown RBP10.47□□□□□ -0.73
LINC00538-201ENST00000626109 ZNF221Q9UK13 617 aa10.47□□□□□ -0.73
LINC00538-201ENST00000626109 TEX13CA0A0J9YWL9 993 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 A0A1B0GUH1 482 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 TMEM129A0AVI4 362 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 C9J4A7 227 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 TOR1AO14656 332 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 PRKYO43930 277 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 LY86O95711 162 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 CTXN2P0C2S0 81 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 MPIP34949 423 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 PNLIPRP2P54317 469 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 PRKAG1P54619 331 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 TAS2R41P59536 307 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 SHC2P98077 582 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 PCK2Q16822 640 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 ACTBL2Q562R1 376 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 RSBN1Q5VWQ0 802 aaPredicted RBP10.46□□□□□ -0.73
LINC00538-201ENST00000626109 LIPKQ5VXJ0 399 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 KCTD20Q7Z5Y7 419 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 GDPD1Q8N9F7 314 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.46□□□□□ -0.73
LINC00538-201ENST00000626109 OR5D16Q8NGK9 328 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 OR51Q1Q8NH59 317 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 TMEM163Q8TC26 289 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 UFD1Q92890 307 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 OTUB1Q96FW1 271 aaPredicted RBP10.46□□□□□ -0.73
LINC00538-201ENST00000626109 NUDT11Q96G61 164 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 MARS2Q96GW9 593 aaKnown RBP10.46□□□□□ -0.73
LINC00538-201ENST00000626109 PEX11GQ96HA9 241 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 SDHCQ99643 169 aaPredicted RBP10.46□□□□□ -0.73
LINC00538-201ENST00000626109 C7orf50Q9BRJ6 194 aaKnown RBP10.46□□□□□ -0.73
LINC00538-201ENST00000626109 UBQLN3Q9H347 655 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 ZNF160Q9HCG1 818 aa10.46□□□□□ -0.73
LINC00538-201ENST00000626109 FGF20Q9NP95 211 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms