RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 TMEFF2Q9UIK5 374 aaPredicted RBP20.58■□□□□ 0.89
ATXN3-253ENST00000621269 GMNCA6NCL1 334 aa20.57■□□□□ 0.88
ATXN3-253ENST00000621269 CLPTM1O96005 669 aa20.57■□□□□ 0.88
ATXN3-253ENST00000621269 ZNF250P15622 560 aa20.57■□□□□ 0.88
ATXN3-253ENST00000621269 CDH15P55291 814 aa20.57■□□□□ 0.88
ATXN3-253ENST00000621269 TOP3AQ13472 1001 aaPredicted RBP20.57■□□□□ 0.88
ATXN3-253ENST00000621269 SGCAQ16586 387 aa20.57■□□□□ 0.88
ATXN3-253ENST00000621269 TMEM154Q6P9G4 183 aa20.57■□□□□ 0.88
ATXN3-253ENST00000621269 ARPINQ7Z6K5 226 aa20.57■□□□□ 0.88
ATXN3-253ENST00000621269 NSMAFQ92636 917 aa20.57■□□□□ 0.88
ATXN3-253ENST00000621269 HDAC2Q92769 488 aaKnown RBP20.57■□□□□ 0.88
ATXN3-253ENST00000621269 FNDC11Q9BVV2 318 aa20.57■□□□□ 0.88
ATXN3-253ENST00000621269 HINT3Q9NQE9 182 aaKnown RBP20.57■□□□□ 0.88
ATXN3-253ENST00000621269 A4GNTQ9UNA3 340 aa20.57■□□□□ 0.88
ATXN3-253ENST00000621269 HIF3AQ9Y2N7 669 aa20.57■□□□□ 0.88
ATXN3-253ENST00000621269 MMP7P09237 267 aaPredicted RBP20.56■□□□□ 0.88
ATXN3-253ENST00000621269 SAGP10523 405 aaPredicted RBP20.56■□□□□ 0.88
ATXN3-253ENST00000621269 CCNOP22674 350 aa20.56■□□□□ 0.88
ATXN3-253ENST00000621269 CDAP32320 146 aa20.56■□□□□ 0.88
ATXN3-253ENST00000621269 TMEM33P57088 247 aa20.56■□□□□ 0.88
ATXN3-253ENST00000621269 MRPS11P82912 194 aaKnown RBP20.56■□□□□ 0.88
ATXN3-253ENST00000621269 MOGQ16653 247 aa20.56■□□□□ 0.88
ATXN3-253ENST00000621269 PABPC1L2AQ5JQF8 200 aa20.56■□□□□ 0.88
ATXN3-253ENST00000621269 POU5F2Q8N7G0 328 aa20.56■□□□□ 0.88
ATXN3-253ENST00000621269 RP9Q8TA86 221 aaKnown RBP20.56■□□□□ 0.88
ATXN3-253ENST00000621269 C1orf159Q96HA4 380 aa20.56■□□□□ 0.88
ATXN3-253ENST00000621269 RBP7Q96R05 134 aa20.56■□□□□ 0.88
ATXN3-253ENST00000621269 CMTM6Q9NX76 183 aa20.56■□□□□ 0.88
ATXN3-253ENST00000621269 GSTA4O15217 222 aa20.55■□□□□ 0.88
ATXN3-253ENST00000621269 IFNW1P05000 195 aa20.55■□□□□ 0.88
ATXN3-253ENST00000621269 DRD4P21917 467 aa20.55■□□□□ 0.88
ATXN3-253ENST00000621269 PCMT1P22061 227 aa20.55■□□□□ 0.88
ATXN3-253ENST00000621269 GUCA1AP43080 201 aaPredicted RBP20.55■□□□□ 0.88
ATXN3-253ENST00000621269 YAP1P46937 504 aaKnown RBP20.55■□□□□ 0.88
ATXN3-253ENST00000621269 RPL27P61353 136 aaKnown RBP20.55■□□□□ 0.88
ATXN3-253ENST00000621269 ERVS71-1P61550 626 aa20.55■□□□□ 0.88
ATXN3-253ENST00000621269 FMODQ06828 376 aa20.55■□□□□ 0.88
ATXN3-253ENST00000621269 CPEB3Q8NE35 698 aaKnown RBP20.55■□□□□ 0.88
ATXN3-253ENST00000621269 FNDC8Q8TC99 324 aa20.55■□□□□ 0.88
ATXN3-253ENST00000621269 YIPF5Q969M3 257 aa20.55■□□□□ 0.88
ATXN3-253ENST00000621269 ALG12Q9BV10 488 aa20.55■□□□□ 0.88
ATXN3-253ENST00000621269 ZNF416Q9BWM5 594 aa20.55■□□□□ 0.88
ATXN3-253ENST00000621269 NARFLQ9H6Q4 476 aa20.55■□□□□ 0.88
ATXN3-253ENST00000621269 ZNF275Q9NSD4 429 aaPredicted RBP20.55■□□□□ 0.88
ATXN3-253ENST00000621269 RHCGQ9UBD6 479 aa20.55■□□□□ 0.88
ATXN3-253ENST00000621269 EIF3KQ9UBQ5 218 aaKnown RBP20.55■□□□□ 0.88
ATXN3-253ENST00000621269 UGT2A1Q9Y4X1 527 aa20.55■□□□□ 0.88
ATXN3-253ENST00000621269 RTTNQ86VV8 2226 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 IGLV3-9A0A075B6K5 115 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 C17orf100A8MU93 164 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 B4DSR2 109 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 PPIHO43447 177 aaKnown RBP20.54■□□□□ 0.88
ATXN3-253ENST00000621269 NCR1O76036 304 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 MT-ND5P03915 603 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 STOMP27105 288 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 SRP14P37108 136 aaKnown RBP20.54■□□□□ 0.88
ATXN3-253ENST00000621269 MAGEB1P43366 347 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 DVL1P1P54792 670 aaPredicted RBP20.54■□□□□ 0.88
ATXN3-253ENST00000621269 LIPEQ05469 1076 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 TRAM2Q15035 370 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 PCGF3Q3KNV8 242 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 KRTAP24-1Q3LI83 254 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 HSP90B2PQ58FF3 399 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 THEM4Q5T1C6 240 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 OR1J1Q8NGS3 322 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 NABP1Q96AH0 204 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 NMD3Q96D46 503 aaKnown RBP20.54■□□□□ 0.88
ATXN3-253ENST00000621269 TSPAN32Q96QS1 320 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 CCDC134Q9H6E4 229 aa20.54■□□□□ 0.88
ATXN3-253ENST00000621269 IGKV1D-43A0A0B4J1Z2 117 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 ZNF682O95780 498 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 ZNF32P17041 273 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 CTXN1P60606 82 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 CCL8P80075 99 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 FAM205BPQ63HN1 556 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 SLC25A47Q6Q0C1 308 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 UNQ6126/PRO20091Q6UXV3 157 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 VTCN1Q7Z7D3 282 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 OAFQ86UD1 273 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 IGFN1Q86VF2 1251 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 GLCCI1Q86VQ1 547 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 NRMQ8IXM6 262 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 SLC15A3Q8IY34 581 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 OFCC1Q8IZS5 231 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 OR51A7Q8NH64 312 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 CLDND2Q8NHS1 167 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 HOPXQ9BPY8 73 aaPredicted RBP20.53■□□□□ 0.88
ATXN3-253ENST00000621269 ZNF446Q9NWS9 450 aa20.53■□□□□ 0.88
ATXN3-253ENST00000621269 MALRD1Q5VYJ5 2156 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 A6NIZ1 184 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 EFCAB9A8MZ26 197 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 CXCR6O00574 342 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 CCDC22O60826 627 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 IGHMP01871 453 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 TFP02787 698 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 COX4I1P13073 169 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 MAKP20794 623 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 GDI2P50395 445 aaKnown RBP20.52■□□□□ 0.88
ATXN3-253ENST00000621269 RAP1BP61224 184 aa20.52■□□□□ 0.88
ATXN3-253ENST00000621269 RAP1AP62834 184 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms