RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 A0A1W2PPQ1 181 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 TSPAN6O43657 245 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 HIST1H2BKO60814 126 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 ARL6IP5O75915 188 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 MT-ND5P03915 603 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 HIST1H2BJP06899 126 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 RAB40ALP0C0E4 278 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 DAOP14920 347 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 HLA-GP17693 338 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 HIST1H2BOP23527 126 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 HIST1H2BBP33778 126 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 RGS8P57771 180 aaPredicted RBP9.43□□□□□ -0.9
VPS11-207ENST00000620429 HIST1H2BDP58876 126 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 SNRPD1P62314 119 aaKnown RBP9.43□□□□□ -0.9
VPS11-207ENST00000620429 HIST1H2BCP62807 126 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 HIST2H2BEQ16778 126 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.43□□□□□ -0.9
VPS11-207ENST00000620429 FBXW9Q5XUX1 488 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 ASTLQ6HA08 431 aaPredicted RBP9.43□□□□□ -0.9
VPS11-207ENST00000620429 EIF5AL1Q6IS14 154 aaKnown RBP9.43□□□□□ -0.9
VPS11-207ENST00000620429 ARMC6Q6NXE6 501 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 BTNL8Q6UX41 500 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 THNSL2Q86YJ6 484 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 ZNF283Q8N7M2 679 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 OR6T1Q8NGN1 323 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 RNASEH2CQ8TDP1 164 aaKnown RBP9.43□□□□□ -0.9
VPS11-207ENST00000620429 PPP1R1CQ8WVI7 109 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 RAB40AQ8WXH6 277 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 HIST1H2BHQ93079 126 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 S100A16Q96FQ6 103 aaKnown RBP9.43□□□□□ -0.9
VPS11-207ENST00000620429 PACRGQ96M98 296 aaPredicted RBP9.43□□□□□ -0.9
VPS11-207ENST00000620429 WDR92Q96MX6 357 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 FCRL4Q96PJ5 515 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 HIST1H2BNQ99877 126 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 HIST1H2BMQ99879 126 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 TAS2R8Q9NYW2 309 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 A4GNTQ9UNA3 340 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 PPIL1Q9Y3C6 166 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 MYO7AQ13402 2215 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 A0A1W2PPE2 198 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 SMCO3A2RU48 225 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 M0R036 132 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 LEFTY2O00292 366 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 SURF4O15260 269 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 HCRTR2O43614 444 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 IL18BPO95998 194 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 RPLP1P05386 114 aaKnown RBP9.43□□□□□ -0.9
VPS11-207ENST00000620429 C8AP07357 584 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 FABP4P15090 132 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 DPP4P27487 766 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 THBS4P35443 961 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 SLC6A9P48067 706 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 DHPSP49366 369 aaPredicted RBP9.43□□□□□ -0.9
VPS11-207ENST00000620429 MANFP55145 182 aaKnown RBP9.43□□□□□ -0.9
VPS11-207ENST00000620429 PPP2CBP62714 309 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 PPP2CAP67775 309 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 OR7A5Q15622 319 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 FNDC3BQ53EP0 1204 aaKnown RBP9.43□□□□□ -0.9
VPS11-207ENST00000620429 TMEM69Q5SWH9 247 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 PPP1R3BQ86XI6 285 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 MORN4Q8NDC4 146 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 ZNF607Q96SK3 696 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 ZBP1Q9H171 429 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 A4GALTQ9NPC4 353 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 DYRK1BQ9Y463 629 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 PLXND1Q9Y4D7 1925 aa9.43□□□□□ -0.9
VPS11-207ENST00000620429 LNP1A1A4G5 178 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 CDRT15L2A8MXV6 281 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 XRCC3O43542 346 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 ITGB2P05107 769 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 NT5EP21589 574 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 MC3RP41968 323 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 PNLIPRP1P54315 467 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 ATP1B3P54709 279 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 TBPL1P62380 186 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 TSPAN31Q12999 210 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 ADCK2Q7Z695 626 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 SPRED2Q7Z698 418 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 HMGN2P46Q86SG4 172 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 TMEM25Q86YD3 366 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 OR4E2Q8NGC2 313 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 OR1J2Q8NGS2 313 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 OR13D1Q8NGV5 346 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 OR4K15Q8NH41 348 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 C1orf216Q8TAB5 229 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 SECTM1Q8WVN6 248 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 NEURL3Q96EH8 262 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 GAL3ST4Q96RP7 486 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 ACTRT3Q9BYD9 372 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 CHST6Q9GZX3 395 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 GSX1Q9H4S2 264 aaPredicted RBP9.42□□□□□ -0.9
VPS11-207ENST00000620429 IL20RAQ9UHF4 553 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 LSM7Q9UK45 103 aaKnown RBP9.42□□□□□ -0.9
VPS11-207ENST00000620429 GOLGA4Q13439 2230 aaKnown RBP9.42□□□□□ -0.9
VPS11-207ENST00000620429 GXYLT2A0PJZ3 443 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 ANTXRLA6NF34 631 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 HIDE1A8MVS5 230 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 HSBP1L1C9JCN9 74 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 NPC1O15118 1278 aa9.42□□□□□ -0.9
VPS11-207ENST00000620429 DIRAS3O95661 229 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms