RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 RPS15P62841 145 aaKnown RBP2.82□□□□□ -1.96
LPP-221ENST00000618621 ACY1Q03154 408 aa2.82□□□□□ -1.96
LPP-221ENST00000618621 DBPQ10586 325 aaPredicted RBP2.82□□□□□ -1.96
LPP-221ENST00000618621 ZNF628Q5EBL2 1059 aa2.82□□□□□ -1.96
LPP-221ENST00000618621 IKZF5Q9H5V7 419 aa2.82□□□□□ -1.96
LPP-221ENST00000618621 RGPD1P0DJD0 1748 aa2.82□□□□□ -1.96
LPP-221ENST00000618621 MT-ATP6P00846 226 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 CA3P07451 260 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 EPXP11678 715 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 CDKN2AP42771 156 aaKnown RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 HBG1P69891 147 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 HBG2P69892 147 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 ZNF616Q08AN1 781 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 RPUSD3Q6P087 351 aaKnown RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 BRICD5Q6PL45 260 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 VRK2Q86Y07 508 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 VRK3Q8IV63 474 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 EMG1Q92979 244 aaKnown RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 PLEKHA3Q9HB20 300 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 ATP13A2Q9NQ11 1180 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 PIK3C2AO00443 1686 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 P04436 131 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 RPS10P46783 165 aaKnown RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 RAG2P55895 527 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 CLDN20P56880 219 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 GRB2P62993 217 aaKnown RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 TLE4Q04727 773 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 MRPL2Q5T653 305 aaKnown RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 OPN5Q6U736 354 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 MOB3CQ70IA8 216 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 THNSL2Q86YJ6 484 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 ZNF561Q8N587 486 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 KATNB1Q9BVA0 655 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 GPR174Q9BXC1 333 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 MED20Q9H944 212 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 CMC2Q9NRP2 79 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 C1orf123Q9NWV4 160 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 SUSD5O60279 629 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 EIF4E2O60573 245 aaKnown RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 CD79BP40259 229 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 RELQ04864 619 aaPredicted RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 SRYQ05066 204 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 ZNF74Q16587 644 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 ZBTB37Q5TC79 503 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 FCRL6Q6DN72 434 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 SLC48A1Q6P1K1 146 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 PAQR6Q6TCH4 344 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 NLGN4YQ8NFZ3 816 aaPredicted RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 LRFN5Q96NI6 719 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 INSM2Q96T92 566 aaPredicted RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 VAMP8Q9BV40 100 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 SMOC1Q9H4F8 434 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 STARD5Q9NSY2 213 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 CA14Q9ULX7 337 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 TMEM72A0PK05 275 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 TSPAN12O95859 305 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 SOD1P00441 154 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 LCATP04180 440 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 CST5P28325 142 aaPredicted RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 BCL6P41182 706 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 CAV2P51636 162 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 OR7A5Q15622 319 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 BCDIN3DQ7Z5W3 292 aaKnown RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 BPIFCQ8NFQ6 507 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 PFN4Q8NHR9 129 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 APH1BQ8WW43 257 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 SENP5Q96HI0 755 aaPredicted RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 ATF6BQ99941 703 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 QRSL1Q9H0R6 528 aaKnown RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 CXorf36Q9H7Y0 433 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 SLC25A19Q9HC21 320 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 A0A1W2PPV4 95 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 DEGS1O15121 323 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 PRICKLE3O43900 615 aaPredicted RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 HOXD9P28356 352 aaPredicted RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 DHPSP49366 369 aaPredicted RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 MLF1P58340 268 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 IL10RAQ13651 578 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 PLCXD3Q63HM9 321 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 ACSM5Q6NUN0 579 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 LYPD4Q6UWN0 246 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 MMP21Q8N119 569 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 TP53I13Q8NBR0 393 aaPredicted RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 FBLIM1Q8WUP2 373 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 OR5B2Q96R09 309 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 NIPSNAP1Q9BPW8 284 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 A0A1B0GV50 99 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 IGLV3-25P01717 112 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 AADACP22760 399 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 MMP15P51511 669 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 SEC61A1P61619 476 aaKnown RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 C1orf61Q13536 156 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 NFATC4Q14934 902 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 ZMAT1Q5H9K5 638 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 KIAA2026Q5HYC2 2103 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 ABHD17CQ6PCB6 329 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 Q71RC1 249 aaPredicted RBP2.81□□□□□ -1.96
LPP-221ENST00000618621 OR13C8Q8NGS7 320 aa2.81□□□□□ -1.96
LPP-221ENST00000618621 OR51Q1Q8NH59 317 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms