RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 HIST1H2ABP04908 130 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 DNASE1P24855 282 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 DCAF7P61962 342 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 ZNF117Q03924 483 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 RIPPLY1Q0D2K3 151 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 RASGEF1BQ0VAM2 473 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 SFRP4Q6FHJ7 346 aaPredicted RBP13.25□□□□□ -0.29
CDH1-213ENST00000612417 FDX2Q6P4F2 183 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 COX15Q7KZN9 410 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 HIST3H2AQ7L7L0 130 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 SERPINA12Q8IW75 414 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 ZNF680Q8NEM1 530 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 STT3BQ8TCJ2 826 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 ZNF721Q8TF20 911 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 HIST1H2ACQ93077 130 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 INTS14Q96SY0 518 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 KLHDC3Q9BQ90 382 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 COMMD4Q9H0A8 199 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 NPDC1Q9NQX5 325 aaPredicted RBP13.25□□□□□ -0.29
CDH1-213ENST00000612417 SLC22A11Q9NSA0 550 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 FKBP7Q9Y680 259 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 KIF26BQ2KJY2 2108 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 A0A1W2PQD3 144 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 LNP1A1A4G5 178 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 TVP23AA6NH52 213 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 G3V3Q6 166 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 H7C1C5 153 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 NTN3O00634 580 aaPredicted RBP13.25□□□□□ -0.29
CDH1-213ENST00000612417 CDC40O60508 579 aaKnown RBP eCLIP13.25□□□□□ -0.29
CDH1-213ENST00000612417 ICOSLGO75144 302 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 KHDRBS3O75525 346 aaKnown RBP13.25□□□□□ -0.29
CDH1-213ENST00000612417 ZNF883P0CG24 379 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 CPN1P15169 458 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 VEGFCP49767 419 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 EFNA3P52797 238 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 FOXL2P58012 376 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 TAS2R20P59543 309 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 LCN6P62502 163 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 DCDP81605 110 aaKnown RBP13.25□□□□□ -0.29
CDH1-213ENST00000612417 LGALSLQ3ZCW2 172 aaPredicted RBP13.25□□□□□ -0.29
CDH1-213ENST00000612417 CCDC157Q569K6 752 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 ESCO2Q56NI9 601 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 DPY19L4Q7Z388 723 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 C7orf57Q8NEG2 295 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 OR6N2Q8NGY6 317 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 GPR148Q8TDV2 347 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 DAZLQ92904 295 aaKnown RBP13.25□□□□□ -0.29
CDH1-213ENST00000612417 MCHR2Q969V1 340 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 DACT3Q96B18 629 aaPredicted RBP13.25□□□□□ -0.29
CDH1-213ENST00000612417 CITED4Q96RK1 184 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 ADOQ96SZ5 270 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 TAS2R10Q9NYW0 307 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 MRPL15Q9P015 296 aaKnown RBP13.25□□□□□ -0.29
CDH1-213ENST00000612417 IKZF2Q9UKS7 526 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 AUP1Q9Y679 476 aa13.25□□□□□ -0.29
CDH1-213ENST00000612417 LINC00862A6NCI5 91 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 TSC22D2O75157 780 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 TSPAN9O75954 239 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 HEXBP07686 556 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 SOX2P48431 317 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 RPS15P62841 145 aaKnown RBP13.24□□□□□ -0.29
CDH1-213ENST00000612417 LANCL3Q6ZV70 420 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 SPICQ8N5J4 248 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 AGBL5Q8NDL9 886 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 OTOSQ8NHW6 89 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 NXPE2Q96DL1 559 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 GAL3ST4Q96RP7 486 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 UQCC2Q9BRT2 126 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 RTN4RQ9BZR6 473 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 SYT4Q9H2B2 425 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 NKIRAS2Q9NYR9 191 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 FLVCR2Q9UPI3 526 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 ALPK2Q86TB3 2170 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 PCNX3Q9H6A9 2034 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 TRAV8-7A0A075B6U6 113 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 TRAV36DV7A0A075B6V5 113 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 ANXA2P2A6NMY6 339 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 LEUTXA8MZ59 168 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 ALG1L2C9J202 215 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 TO15178 435 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 EIF4E2O60573 245 aaKnown RBP13.24□□□□□ -0.29
CDH1-213ENST00000612417 GLSO94925 669 aaPredicted RBP13.24□□□□□ -0.29
CDH1-213ENST00000612417 MT-ATP6P00846 226 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 ANXA2P07355 339 aaKnown RBP13.24□□□□□ -0.29
CDH1-213ENST00000612417 IL32P24001 234 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 TRA2AQ13595 282 aaKnown RBP eCLIP13.24□□□□□ -0.29
CDH1-213ENST00000612417 EBPQ15125 230 aaKnown RBP13.24□□□□□ -0.29
CDH1-213ENST00000612417 GLDNQ6ZMI3 551 aaPredicted RBP13.24□□□□□ -0.29
CDH1-213ENST00000612417 TMPRSS12Q86WS5 348 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 ZNF227Q86WZ6 799 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 PRSS35Q8N3Z0 413 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 TMEM106AQ96A25 262 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 MARVELD3Q96A59 401 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 C4orf45Q96LM5 186 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 DCBLD2Q96PD2 775 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 TAS2R5Q9NYW4 299 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 COPS7AQ9UBW8 275 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 STEAP1Q9UHE8 339 aa13.24□□□□□ -0.29
CDH1-213ENST00000612417 CACNA1CQ13936 2221 aa13.23□□□□□ -0.29
CDH1-213ENST00000612417 XRCC3O43542 346 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms