RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 XKR4Q5GH76 650 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 BEX5Q5H9J7 111 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 CASC10Q5T4H9 136 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 RAET1LQ5VY80 246 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 NCCRP1Q6ZVX7 275 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 UTS2BQ765I0 119 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 LUZP2Q86TE4 346 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 ST13P4Q8IZP2 240 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 PNKDQ8N490 385 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 SUMF2Q8NBJ7 301 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF680Q8NEM1 530 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF596Q8TC21 504 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 MAGEE2Q8TD90 523 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 RNF138Q8WVD3 245 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 C10orf35Q96D05 121 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 TMA16Q96EY4 203 aaKnown RBP2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 KCNA7Q96RP8 456 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 MBOAT4Q96T53 435 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 PARD6GQ9BYG4 376 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 ROPN1BQ9BZX4 212 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 ACTR6Q9GZN1 396 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 IL22Q9GZX6 179 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 MCCC2Q9HCC0 563 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 PAQR5Q9NXK6 330 aaPredicted RBP2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 AHSPQ9NZD4 102 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 GCNT4Q9P109 453 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 GGA2Q9UJY4 613 aa2.89□□□□□ -1.95
SMCHD1-213ENST00000609587 PDZK1P1A8MUH7 402 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 H3BQV1 296 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 PANO1I0J062 215 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 AGPAT2O15120 278 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 NBR2O15453 112 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 TIMM8AO60220 97 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 ATP5HO75947 161 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 CLDN9O95484 217 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 MCF2P10911 925 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 CCNB1P14635 433 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 FDFT1P37268 417 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 P2RY2P41231 377 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 VDAC2P45880 294 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 ARRB1P49407 418 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 DLX1P56177 255 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 SEC61GP60059 68 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 LRRC63Q05C16 580 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 ENPEPQ07075 957 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 OR5I1Q13606 314 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 DGCR6Q14129 220 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 PIGHQ14442 188 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 PSG3Q16557 428 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 NRF1Q16656 503 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 C18orf21Q32NC0 220 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF470Q6ECI4 717 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 TMEM53Q6P2H8 277 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 SASS6Q6UVJ0 657 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 CD300LGQ6UXG3 332 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 DCXRQ7Z4W1 244 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 DHDDSQ86SQ9 333 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 OR9G1Q8NH87 305 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 KCNG3Q8TAE7 436 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 ENKURQ8TC29 256 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 FANK1Q8TC84 345 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 NRGNQ92686 78 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 PPP1R14BQ96C90 147 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 TM4SF19Q96DZ7 209 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF514Q96K75 400 aaPredicted RBP2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 OXGR1Q96P68 337 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 NRIP2Q9BQI9 281 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 RAB1BQ9H0U4 201 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 RNF167Q9H6Y7 350 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 ANKRA2Q9H9E1 313 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF160Q9HCG1 818 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF302Q9NR11 478 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 MMP26Q9NRE1 261 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF639Q9UID6 485 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 PIGLQ9Y2B2 252 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 ATRXP46100 2492 aa2.88□□□□□ -1.95
SMCHD1-213ENST00000609587 LOC105371267A0A1B0GV96 52 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 A0A1W2PPE3 182 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 GOLGA8IPA6NC78 632 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 PINLYPA6NC86 204 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 GJE1A6NN92 205 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 GOLGA8MH3BSY2 632 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 NDUFAB1O14561 156 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 HSD17B6O14756 317 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 EIF3HO15372 352 aaKnown RBP eCLIP2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 CHMP2AO43633 222 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 SEMA3DO95025 777 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 SERPINA6P08185 405 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 GIPP09681 153 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 NR2C1P13056 603 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 MGMTP16455 207 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF17P17021 662 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 CCNE1P24864 410 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 CTRLP40313 264 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 GSSP48637 474 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 HSPA13P48723 471 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 GDI2P50395 445 aaKnown RBP2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 ZNF133P52736 654 aaPredicted RBP2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 C21orf59P57076 290 aa2.87□□□□□ -1.95
SMCHD1-213ENST00000609587 PSMC5P62195 406 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms