RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 OR52E2Q8NGJ4 325 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 OR8D4Q8NGM9 314 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 OR4K13Q8NH42 304 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 PKP2Q99959 881 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 C1QTNF6Q9BXI9 259 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 SYT4Q9H2B2 425 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 SEC61A2Q9H9S3 476 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 REV1Q9UBZ9 1251 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 ENOPH1Q9UHY7 261 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 FBXL3Q9UKT7 428 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 EDARQ9UNE0 448 aa12.46□□□□□ -0.41
CTSA-211ENST00000606066 NAV3Q8IVL0 2385 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 ERICH4A6NGS2 130 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 M0R1B8 84 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 SIAH2O43255 324 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 SLC16A7O60669 478 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 IFNGP01579 166 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 TP53P04637 393 aaPredicted RBP12.45□□□□□ -0.42
CTSA-211ENST00000606066 IGFBP1P08833 259 aaPredicted RBP12.45□□□□□ -0.42
CTSA-211ENST00000606066 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.45□□□□□ -0.42
CTSA-211ENST00000606066 SGCAQ16586 387 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 GSG1Q2KHT4 349 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 SLC36A2Q495M3 483 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 SLC35F1Q5T1Q4 408 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 SLC27A4Q6P1M0 643 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 SEZ6L2Q6UXD5 910 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 PTCHD4Q6ZW05 846 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 SLC16A14Q7RTX9 510 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 CDC20BQ86Y33 519 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 PARP8Q8N3A8 854 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 ICA1LQ8NDH6 482 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 POM121Q96HA1 1249 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 NMNAT3Q96T66 252 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 GABARAPL1Q9H0R8 117 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 KRT84Q9NSB2 600 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 NPAP1Q9NZP6 1156 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 KLHL21Q9UJP4 597 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 OAZ3Q9UMX2 235 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 RNF115Q9Y4L5 304 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 UGT2A1Q9Y4X1 527 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 FREM1Q5H8C1 2179 aa12.45□□□□□ -0.42
CTSA-211ENST00000606066 ANKHD1Q8IWZ3 2542 aaKnown RBP12.44□□□□□ -0.42
CTSA-211ENST00000606066 IGKV1D-43A0A0B4J1Z2 117 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 A0A1W2PPL8 197 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 DPRXA6NFQ7 191 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 RAB36O95755 333 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 IGKV3-15P01624 115 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 HLA-HP01893 362 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 HMGN1P05114 100 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 CD40P25942 277 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 CDAP32320 146 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 GRK5P34947 590 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 GIPRP48546 466 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 DAPP51397 102 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 ESRRGP62508 458 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 RAB1AP62820 205 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 TUBA1BP68363 451 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 TUBA4AP68366 448 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 BSPH1Q075Z2 132 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 PGGHGQ32M88 737 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 FAM27BQ5VT28 67 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 TMEM53Q6P2H8 277 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 FOXL2NBQ6ZUU3 175 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 TUBA1AQ71U36 451 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 GLB1L2Q8IW92 636 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 SKA3Q8IX90 412 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 SDR9C7Q8NEX9 313 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 IL17RDQ8NFM7 739 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 OR4Q3Q8NH05 313 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 SLC38A2Q96QD8 506 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 SH3GL3Q99963 347 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 RBM4BQ9BQ04 359 aaKnown RBP12.44□□□□□ -0.42
CTSA-211ENST00000606066 KCNS3Q9BQ31 491 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 TMEM204Q9BSN7 226 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 WACQ9BTA9 647 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 RBM4Q9BWF3 364 aaKnown RBP12.44□□□□□ -0.42
CTSA-211ENST00000606066 NUAK2Q9H093 628 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 RERGLQ9H628 205 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 RNF121Q9H920 327 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 B3GNT2Q9NY97 397 aa12.44□□□□□ -0.42
CTSA-211ENST00000606066 CRNNQ9UBG3 495 aaPredicted RBP12.44□□□□□ -0.42
CTSA-211ENST00000606066 SAC3D1A6NKF1 404 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 RIIAD1A6NNX1 92 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 ABCD4O14678 606 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 BAG2O95816 211 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 CTLA4P16410 223 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 ZNF3P17036 446 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 MSR1P21757 451 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 LOXP28300 417 aaPredicted RBP12.43□□□□□ -0.42
CTSA-211ENST00000606066 LAP3P28838 519 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 PTDSS1P48651 473 aaKnown RBP12.43□□□□□ -0.42
CTSA-211ENST00000606066 PCBD1P61457 104 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 PIGFQ07326 219 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 GINS1Q14691 196 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 KDM4DQ6B0I6 523 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 ZNF704Q6ZNC4 412 aaPredicted RBP12.43□□□□□ -0.42
CTSA-211ENST00000606066 MDP1Q86V88 176 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 PIAS4Q8N2W9 510 aaPredicted RBP12.43□□□□□ -0.42
CTSA-211ENST00000606066 LRRC18Q8N456 261 aa12.43□□□□□ -0.42
CTSA-211ENST00000606066 NPEPL1Q8NDH3 523 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms