RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 UBL3O95164 117 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 IFNGP01579 166 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 HLA-HP01893 362 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 CD3EP07766 207 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 CD40P25942 277 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 ZNF83P51522 516 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 CRISP1P54107 249 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 PPP2R2BQ00005 443 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 CDK5Q00535 292 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 BSPH1Q075Z2 132 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.1□□□□□ -0.47
RNF40-212ENST00000602784 GINS1Q14691 196 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 GSG1Q2KHT4 349 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 PGGHGQ32M88 737 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 SLC36A2Q495M3 483 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 FBXW10Q5XX13 1052 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 LEG1Q6P5S2 330 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 ZBTB46Q86UZ6 589 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 TMEM200AQ86VY9 491 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 CDC20BQ86Y33 519 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 GLB1L2Q8IW92 636 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 PQLC1Q8N2U9 271 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 NABP1Q96AH0 204 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 SLC38A2Q96QD8 506 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 RBM4BQ9BQ04 359 aaKnown RBP12.1□□□□□ -0.47
RNF40-212ENST00000602784 WACQ9BTA9 647 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 RBM4Q9BWF3 364 aaKnown RBP12.1□□□□□ -0.47
RNF40-212ENST00000602784 TEX12Q9BXU0 123 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 NUAK2Q9H093 628 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 RACGAP1Q9H0H5 632 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 CMC2Q9NRP2 79 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 FKBP7Q9Y680 259 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 CACNA1DQ01668 2161 aa12.1□□□□□ -0.47
RNF40-212ENST00000602784 SPG11Q96JI7 2443 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 CADP27708 2225 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 NBPF19A0A087WUL8 3843 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 IGLV1-36A0A0B4J1U3 117 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 OR6C68A6NDL8 312 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 ZNF503-AS2A6NEH8 195 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 ERICH4A6NGS2 130 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 RIIAD1A6NNX1 92 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 ANKRD65E5RJM6 399 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 HMGN1P05114 100 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 CST2P09228 141 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 CD79AP11912 226 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 MSR1P21757 451 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 POU1F1P28069 291 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 LAP3P28838 519 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 CDAP32320 146 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 CAPZA2P47755 286 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 PTDSS1P48651 473 aaKnown RBP12.09□□□□□ -0.47
RNF40-212ENST00000602784 RAB1AP62820 205 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 ETFDHQ16134 617 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 KCNMB1Q16558 191 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 SGCAQ16586 387 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 ADAM5Q6NVV9 412 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 SLC16A14Q7RTX9 510 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 SYT9Q86SS6 491 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 MDP1Q86V88 176 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 OR6V1Q8N148 313 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 ICA1LQ8NDH6 482 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 IL17RDQ8NFM7 739 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 ZNF75AQ96N20 296 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 HS3ST6Q96QI5 342 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 SH3GL3Q99963 347 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 C1QTNF6Q9BXI9 259 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 KCNN2Q9H2S1 579 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 PLEKHF2Q9H8W4 249 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 SEC61A2Q9H9S3 476 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 SLC25A19Q9HC21 320 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 POLE4Q9NR33 117 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 TMEFF2Q9UIK5 374 aaPredicted RBP12.09□□□□□ -0.47
RNF40-212ENST00000602784 B9D1Q9UPM9 204 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 RNF115Q9Y4L5 304 aa12.09□□□□□ -0.47
RNF40-212ENST00000602784 ROS1P08922 2347 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 IGHV1-18A0A0C4DH31 117 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 A0A1W2PPL8 197 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 A0A1W2PPR1 153 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 SAC3D1A6NKF1 404 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 C12orf71A8MTZ7 269 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 M0R1B8 84 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 DCTN6O00399 190 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 ZNF3P17036 446 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 IGFBP5P24593 272 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 SLC25A1P53007 311 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 PCBD1P61457 104 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 LSM6P62312 80 aaKnown RBP12.08□□□□□ -0.48
RNF40-212ENST00000602784 TUBA1BP68363 451 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 TUBA4AP68366 448 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 GLO1Q04760 184 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 ACSM5Q6NUN0 579 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 TMEM53Q6P2H8 277 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 TUBA1AQ71U36 451 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 SLC37A3Q8NCC5 494 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 SDR9C7Q8NEX9 313 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 OR2T4Q8NH00 348 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 TSSK2Q96PF2 358 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 CIB1Q99828 191 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 C9orf16Q9BUW7 83 aa12.08□□□□□ -0.48
RNF40-212ENST00000602784 NMNAT2Q9BZQ4 307 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms