RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 SIAEQ9HAT2 523 aa16.89■□□□□ 0.29
UPF1-209ENST00000600310 MOV10Q9HCE1 1003 aaKnown RBP16.89■□□□□ 0.29
UPF1-209ENST00000600310 RASSF1Q9NS23 344 aa16.89■□□□□ 0.29
UPF1-209ENST00000600310 B3GNT2Q9NY97 397 aa16.89■□□□□ 0.29
UPF1-209ENST00000600310 USE1Q9NZ43 259 aa16.89■□□□□ 0.29
UPF1-209ENST00000600310 FKBP7Q9Y680 259 aa16.89■□□□□ 0.29
UPF1-209ENST00000600310 UNC79Q9P2D8 2635 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 ZNF503-AS2A6NEH8 195 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 DCTN6O00399 190 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 EI24O14681 340 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 IFNGP01579 166 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 HMGN1P05114 100 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 ALPLP05186 524 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 ANPEPP15144 967 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 CBR1P16152 277 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 NR1H2P55055 460 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 FAM27BQ5VT28 67 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 DPPA2Q7Z7J5 298 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 OR6V1Q8N148 313 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 CBR4Q8N4T8 237 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 NANOS1Q8WY41 292 aaKnown RBP16.88■□□□□ 0.29
UPF1-209ENST00000600310 HTRA1Q92743 480 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 PLPPR2Q96GM1 343 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 TSSK2Q96PF2 358 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 C1QTNF6Q9BXI9 259 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 RPRD1BQ9NQG5 326 aaKnown RBP16.88■□□□□ 0.29
UPF1-209ENST00000600310 CMC2Q9NRP2 79 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 ZNF224Q9NZL3 707 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 CRNNQ9UBG3 495 aaPredicted RBP16.88■□□□□ 0.29
UPF1-209ENST00000600310 B9D1Q9UPM9 204 aa16.88■□□□□ 0.29
UPF1-209ENST00000600310 IGLV1-36A0A0B4J1U3 117 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 A0A1W2PPL8 197 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 DPRXA6NFQ7 191 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 RIIAD1A6NNX1 92 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 HLA-HP01893 362 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 PRF1P14222 555 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 ZNF3P17036 446 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 GUCA1AP43080 201 aaPredicted RBP16.87■□□□□ 0.29
UPF1-209ENST00000600310 CAPZA2P47755 286 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 ZNF83P51522 516 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 CRMP1Q14194 572 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 PTGES3Q15185 160 aaKnown RBP16.87■□□□□ 0.29
UPF1-209ENST00000600310 SGCAQ16586 387 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 NCMAPQ5T1S8 102 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 TMEM236Q5W0B7 351 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 ZBTB46Q86UZ6 589 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 CYB561A3Q8NBI2 242 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 PIK3IP1Q96FE7 263 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 SH3GL3Q99963 347 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 TEX12Q9BXU0 123 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 RACGAP1Q9H0H5 632 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 RERGLQ9H628 205 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 ESRP2Q9H6T0 727 aaKnown RBP16.87■□□□□ 0.29
UPF1-209ENST00000600310 SEC61A2Q9H9S3 476 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 SRA1Q9HD15 236 aaKnown RBP16.87■□□□□ 0.29
UPF1-209ENST00000600310 POLE4Q9NR33 117 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 COA3Q9Y2R0 106 aaPredicted RBP16.87■□□□□ 0.29
UPF1-209ENST00000600310 ADGRG4Q8IZF6 3080 aa16.87■□□□□ 0.29
UPF1-209ENST00000600310 UBL3O95164 117 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 IGKV3-15P01624 115 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 IGLV1-44P01699 117 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 CD79AP11912 226 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 MSR1P21757 451 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 PTAFRP25105 342 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 LAP3P28838 519 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 ARR3P36575 388 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 ALDH3A2P51648 485 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 SLC25A1P53007 311 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 GSG1Q2KHT4 349 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 C3orf36Q3SXR2 165 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 ZBTB49Q6ZSB9 765 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 ZNF771Q7L3S4 317 aaPredicted RBP16.86■□□□□ 0.29
UPF1-209ENST00000600310 SLC16A14Q7RTX9 510 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 MDP1Q86V88 176 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 GLB1L2Q8IW92 636 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 FGFBP3Q8TAT2 258 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 EME1Q96AY2 570 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 HS3ST6Q96QI5 342 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 GABARAPL3Q9BY60 117 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 FN3KQ9H479 309 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 PRR14LQ5THK1 2151 aa16.86■□□□□ 0.29
UPF1-209ENST00000600310 ZAR1LA6NP61 321 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 M0R1B8 84 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 SURF4O15260 269 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 SCG5P05408 212 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 PATE4P0C8F1 98 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 CD40P25942 277 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 EPHA2P29317 976 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 PIGFQ07326 219 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 NPRL3Q12980 569 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 SLC36A2Q495M3 483 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 SLX4IPQ5VYV7 408 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 TMEM108Q6UXF1 575 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 LRRC18Q8N456 261 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 OR2T4Q8NH00 348 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 ZNF75AQ96N20 296 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 SLC29A1Q99808 456 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 TMEM204Q9BSN7 226 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 NMNAT2Q9BZQ4 307 aa16.85■□□□□ 0.29
UPF1-209ENST00000600310 KCNN2Q9H2S1 579 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms