RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 LCN1P1Q5VSP4 162 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 NXNL2Q5VZ03 156 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 RTL6Q6ICC9 239 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 CPOQ8IVL8 374 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 ZNF100Q8IYN0 542 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 GCNT2Q8N0V5 402 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 TMEM123Q8N131 208 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 GPR137CQ8N3F9 429 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 MARVELD2Q8N4S9 558 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 CNEP1R1Q8N9A8 125 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 NPEPL1Q8NDH3 523 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 PROKR2Q8NFJ6 384 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 OR9Q1Q8NGQ5 310 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 RHOXF1Q8NHV9 184 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 CNIH3Q8TBE1 160 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 HDAC2Q92769 488 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 INTS12Q96CB8 462 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 RBP7Q96R05 134 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 KCNK17Q96T54 332 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 RERGLQ9H628 205 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 HINT3Q9NQE9 182 aaKnown RBP10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 VSX1Q9NZR4 365 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 ING1Q9UK53 422 aaPredicted RBP10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 MED12Q93074 2177 aa10.64□□□□□ -0.71
SHKBP1-213ENST00000597325 SLC22A23A1A5C7 686 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 OR6C68A6NDL8 312 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 PRODHO43272 600 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 TIMP3P35625 211 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 CDH11P55287 796 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 RUNX1T1Q06455 604 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 OCLNQ16625 522 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 DEFB113Q30KQ7 82 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 SLC25A30Q5SVS4 291 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 THEM4Q5T1C6 240 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 TMEM211Q6ICI0 200 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 NHLRC1Q6VVB1 395 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 FAM214BQ7L5A3 538 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 UBE2J2Q8N2K1 259 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 ZNF786Q8N393 782 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 OR6K6Q8NGW6 343 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 OR6K3Q8NGY3 331 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 LILRB4Q8NHJ6 448 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 UBE2FQ969M7 185 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 ZNF582Q96NG8 517 aaPredicted RBP10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 TTYH2Q9BSA4 534 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 ULBP2Q9BZM5 246 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 OR51V1Q9H2C8 321 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 SLCO5A1Q9H2Y9 848 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 C12orf49Q9H741 205 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 MED20Q9H944 212 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 SLC24A3Q9HC58 644 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 GLTPQ9NZD2 209 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 COQ3Q9NZJ6 369 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 UPB1Q9UBR1 384 aa10.63□□□□□ -0.71
SHKBP1-213ENST00000597325 SH3D21A4FU49 640 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 SLC22A31A6NKX4 558 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 HSPB2A8KAH6 182 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 SLC16A7O60669 478 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 FAM20BO75063 409 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 ENTPD6O75354 484 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 KHDRBS3O75525 346 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 ZNF432O94892 652 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 GYPBP06028 91 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 GLI4P10075 376 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 SPI1P17947 270 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 GABRB1P18505 474 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 FMO3P31513 532 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 CENPAP49450 140 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 ZNF84P51523 738 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 EFNB1P98172 346 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 CDK5R2Q13319 367 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 APOFQ13790 326 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 HSPB2Q16082 182 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 SLC35D3Q5M8T2 416 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 ZNF362Q5T0B9 420 aaPredicted RBP10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 RIPPLY2Q5TAB7 128 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 PAMR1Q6UXH9 720 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 ABHD12BQ7Z5M8 362 aaPredicted RBP10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 C20orf196Q8IYI0 205 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 CIARTQ8N365 385 aaPredicted RBP10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 RPRMLQ8N4K4 120 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 POMGNT2Q8NAT1 580 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 BBS1Q8NFJ9 593 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 FBLIM1Q8WUP2 373 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 APH1BQ8WW43 257 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 TMEM54Q969K7 222 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 ALKBH3Q96Q83 286 aaPredicted RBP10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 SFXN3Q9BWM7 321 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 MRPL13Q9BYD1 178 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 LINC00470Q9BZP3 86 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 NMNAT2Q9BZQ4 307 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 RACGAP1Q9H0H5 632 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 CLEC4MQ9H2X3 399 aaPredicted RBP10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 SCN3BQ9NY72 215 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 AASSQ9UDR5 926 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 BLOC1S6Q9UL45 172 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 EDARQ9UNE0 448 aa10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 RPL36Q9Y3U8 105 aaKnown RBP10.62□□□□□ -0.71
SHKBP1-213ENST00000597325 FKBP7Q9Y680 259 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms