RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 GIPC3Q8TF64 312 aa15.85■□□□□ 0.13
ZNF558-204ENST00000596172 TMEM171Q8WVE6 324 aa15.85■□□□□ 0.13
ZNF558-204ENST00000596172 NSMAFQ92636 917 aa15.85■□□□□ 0.13
ZNF558-204ENST00000596172 RASD2Q96D21 266 aa15.85■□□□□ 0.13
ZNF558-204ENST00000596172 DUS3LQ96G46 650 aaKnown RBP15.85■□□□□ 0.13
ZNF558-204ENST00000596172 SAMD8Q96LT4 415 aa15.85■□□□□ 0.13
ZNF558-204ENST00000596172 ERMAPQ96PL5 475 aaPredicted RBP15.85■□□□□ 0.13
ZNF558-204ENST00000596172 SNX18Q96RF0 628 aa15.85■□□□□ 0.13
ZNF558-204ENST00000596172 SH3GL3Q99963 347 aa15.85■□□□□ 0.13
ZNF558-204ENST00000596172 NOX3Q9HBY0 568 aa15.85■□□□□ 0.13
ZNF558-204ENST00000596172 ATP6V1G2-DDX39BF2Z307 99 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 OVOL3O00110 214 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 RAB36O95755 333 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 SERPINA5P05154 406 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 SOD3P08294 240 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 CELA3BP08861 270 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 CDAP32320 146 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 GUCA1AP43080 201 aaPredicted RBP15.84■□□□□ 0.13
ZNF558-204ENST00000596172 GIPRP48546 466 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 PTDSS1P48651 473 aaKnown RBP15.84■□□□□ 0.13
ZNF558-204ENST00000596172 NPRL3Q12980 569 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 C1orf146Q5VVC0 180 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 TMEM53Q6P2H8 277 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 B3GLCTQ6Y288 498 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 OR10G2Q8NGC3 310 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 FGFBP3Q8TAT2 258 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 WACQ9BTA9 647 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 IFT27Q9BW83 186 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 KCNN2Q9H2S1 579 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 CXorf56Q9H5V9 222 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 SEC61A2Q9H9S3 476 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 ZNF701Q9NV72 531 aaPredicted RBP15.84■□□□□ 0.13
ZNF558-204ENST00000596172 LAMP3Q9UQV4 416 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 ATP23Q9Y6H3 246 aa15.84■□□□□ 0.13
ZNF558-204ENST00000596172 IGHV2OR16-5A0A0B4J2B6 119 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 H7C1C5 153 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 SOCS2O14508 198 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 SMPD2O60906 423 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 PPP1R3DO95685 299 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 CD8AP01732 235 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 MMP7P09237 267 aaPredicted RBP15.83■□□□□ 0.12
ZNF558-204ENST00000596172 CALCRP30988 508 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 APOBEC3AP31941 199 aaPredicted RBP15.83■□□□□ 0.12
ZNF558-204ENST00000596172 TTKP33981 857 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 CDKN2AP42771 156 aaKnown RBP15.83■□□□□ 0.12
ZNF558-204ENST00000596172 LCN6P62502 163 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 AGAP6Q5VW22 663 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 PTCHD4Q6ZW05 846 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 MYPOPQ86VE0 399 aaPredicted RBP15.83■□□□□ 0.12
ZNF558-204ENST00000596172 NUP37Q8NFH4 326 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 OR52L1Q8NGH7 329 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 NRBF2Q96F24 287 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 FEVQ99581 238 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 TRAF4Q9BUZ4 470 aaPredicted RBP15.83■□□□□ 0.12
ZNF558-204ENST00000596172 GSX2Q9BZM3 304 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 C1orf198Q9H425 327 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 ARMC1Q9NVT9 282 aa15.83■□□□□ 0.12
ZNF558-204ENST00000596172 MAP1AP78559 2803 aaPredicted RBP15.83■□□□□ 0.12
ZNF558-204ENST00000596172 DEAF1O75398 565 aaPredicted RBP15.82■□□□□ 0.12
ZNF558-204ENST00000596172 CIB2O75838 187 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 PTHP01270 115 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 CST2P09228 141 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 PATE4P0C8F1 98 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 ZNF35P13682 527 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 CTLA4P16410 223 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 FABP6P51161 128 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 HGFACQ04756 655 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 SGCAQ16586 387 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 TMEM179BQ7Z7N9 219 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 SYT9Q86SS6 491 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 ZNF584Q8IVC4 421 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 FBXL14Q8N1E6 418 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 HTRA1Q92743 480 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 UTP4Q969X6 686 aaKnown RBP15.82■□□□□ 0.12
ZNF558-204ENST00000596172 GTPBP3Q969Y2 492 aaKnown RBP15.82■□□□□ 0.12
ZNF558-204ENST00000596172 SYT4Q9H2B2 425 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 EGLN3Q9H6Z9 239 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 RNF121Q9H920 327 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 POLE4Q9NR33 117 aa15.82■□□□□ 0.12
ZNF558-204ENST00000596172 BHLHE40O14503 412 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 SLC16A7O60669 478 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 E2F6O75461 281 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 KHDRBS3O75525 346 aaKnown RBP15.81■□□□□ 0.12
ZNF558-204ENST00000596172 HIST1H1CP16403 213 aaKnown RBP15.81■□□□□ 0.12
ZNF558-204ENST00000596172 MSR1P21757 451 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 LAP3P28838 519 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 NOS3P29474 1203 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 CRABP1P29762 137 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 ERFP50548 548 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 PCBD1P61457 104 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 CCNIQ14094 377 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 RAB39AQ14964 217 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 ETFDHQ16134 617 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 GLB1L2Q8IW92 636 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 MUC15Q8N387 334 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 LNX2Q8N448 690 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 LRRC18Q8N456 261 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 MS4A3Q96HJ5 214 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 PLA2G12AQ9BZM1 189 aa15.81■□□□□ 0.12
ZNF558-204ENST00000596172 NUAK2Q9H093 628 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms